| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314005
Identifier: 158314005
GI number: 158314005
Start: 2606844
End: 2607158
Strand: Direct
Name: 158314005
Synonym: Franean1_2171
Alternate gene names: NA
Gene position: 2606844-2607158 (Clockwise)
Preceding gene: 158314004
Following gene: 158314006
Centisome position: 29.02
GC content: 61.27
Gene sequence:
>315_bases TTGACGTCGTCGCACCGGTCCGGTCTGCTTCTGCATCCCGGTTTTCCTCGACATCGTGCCGCGCCGCGCACGAATATGAG GAACACGGGTTTCCTGCTGCGGATCTCAGGAGGCGCCGCCTGTGCGGTCTGCGCCGGATTCTGTGTGACCACTGCTGTCT GGGGACTTGGTCGCCGGATATGGACTCTCCGATGTCTGCGAAAAAAGATATCGCCTAATCTAGGCGCTGCCATATGGGTA ACCTGCTGCGGTCGTACCGGGAAGATTCGAGTCGCCGGCGGTGGCTTGGTGGCGGTTGCGGTTGCGGTGGGTTGA
Upstream 100 bases:
>100_bases CGGCTCCTCGGCCTGACCTCGTGCACCTGGCCTGGGTCGTGTACTGGGCCCTGCGCAGCGCGCGGGACATGACCACCATG CCGGGCCGTCTCGCTGACAC
Downstream 100 bases:
>100_bases AAACTATTCGTTCGGACGCTGGAACCGGTGCGCCGCACCGAATCAGCCTTATTTTTACAGACGGTCCTCGGGTATCTTTG GCGGCGATTATGGTCAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTSSHRSGLLLHPGFPRHRAAPRTNMRNTGFLLRISGGAACAVCAGFCVTTAVWGLGRRIWTLRCLRKKISPNLGAAIWV TCCGRTGKIRVAGGGLVAVAVAVG
Sequences:
>Translated_104_residues MTSSHRSGLLLHPGFPRHRAAPRTNMRNTGFLLRISGGAACAVCAGFCVTTAVWGLGRRIWTLRCLRKKISPNLGAAIWV TCCGRTGKIRVAGGGLVAVAVAVG >Mature_103_residues TSSHRSGLLLHPGFPRHRAAPRTNMRNTGFLLRISGGAACAVCAGFCVTTAVWGLGRRIWTLRCLRKKISPNLGAAIWVT CCGRTGKIRVAGGGLVAVAVAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10914; Mature: 10783
Theoretical pI: Translated: 12.37; Mature: 12.37
Prosite motif: PS00261 GLYCO_HORMONE_BETA_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSHRSGLLLHPGFPRHRAAPRTNMRNTGFLLRISGGAACAVCAGFCVTTAVWGLGRRI CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH WTLRCLRKKISPNLGAAIWVTCCGRTGKIRVAGGGLVAVAVAVG HHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECC >Mature Secondary Structure TSSHRSGLLLHPGFPRHRAAPRTNMRNTGFLLRISGGAACAVCAGFCVTTAVWGLGRRI CCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH WTLRCLRKKISPNLGAAIWVTCCGRTGKIRVAGGGLVAVAVAVG HHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA