| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313964
Identifier: 158313964
GI number: 158313964
Start: 2559004
End: 2560008
Strand: Direct
Name: 158313964
Synonym: Franean1_2130
Alternate gene names: NA
Gene position: 2559004-2560008 (Clockwise)
Preceding gene: 158313963
Following gene: 158313966
Centisome position: 28.49
GC content: 72.54
Gene sequence:
>1005_bases GTGACGCAGCGGTCAGGCAGTCCGGAAGGATCTGCGGCTCCCGGACTCTCTGACGGTAGGGCTTCAGCTCCCGCGCGCAT CTCGCGTGTCCGCTCCCTGGCGGTGGCAGTGACAGGGGGTCGGACGTTTCTCGGCGCGAGGTGGGTCCGCGCGCTGCTGG CGCTGACCCCGCCCGCCCGGCAACCAGGTCTCGCGCTGTGGCTGCTCGGGCTGGCCCCGCACTACTTCCGGGGCCGCGAC CGGGGCGGCGAAGCCCATCGCAACCGTGTGTCACGAGAGCTGTTCGTCCGGGATGTGCTCGCACCGTTCCTGGCACCCGA GCAGGACCTGCTCGACATCGGCTGCGGCCCCGGGTACCTGGCGCGGGCGGTGGCCGGGCGGGTCTGGTCCGTCACGGCGG TCGACGTCTCGCGGGGCGTCCTGGCCTGCGCGCGGGTCCTCAACTCGGCAGTCAACATCGATTATCGGACTCCCCGGGAG TTCTTCGGATCCCGGCGTCGGGTGGACATCGCCGTGTCCCTCGCGGTCGCCGAGCACCTCGGCGACGATGAGCTGTCGGC GATGCTGTCCTCGGTGCGGCCCACACTCCGACCGGGCGGCCGCCTTCTCCTTCACGTGGCCGTGGCGGACTCCGACACCT CCGGCGAGGGCGTGCCGCCGTCCGCCGGTCTTGCACCTGGCCTGTGGGGTCGATACGCCCTCCCGATCCACCCGCGCACC CGGGACCACCTCGTGGGGCTGGTCGAACGGGCCGGGTTCAGCGACGTCGAGCTCCACGCCCTGGGCGCGCTGACCGACCT CGACGACAGGCTCACGGCCCGGCATCTGCTGGTCGCCACCCGCCCGCACGATCCGGTCGCACTCCGGACCGCACTCGAGT TCGCTCAGGCCCGCCCGGACAGCCAGGTAGGCATGCACGTCGGGGCTGGCTTGGACGCACGGACCGGGCCGGATGGCGTG GCGGCGGTCCTGGTGGACCTCGAGGAACGCCGAGCGACCGCCTGA
Upstream 100 bases:
>100_bases ACCCGTCCCGATCCCAGAAGCTGCGCGACTACCTGGAGTAGTCGAACTCGTAGTAGTCATTCGTTGACTTAGCGTGTTCG GCCTGTCAGGGTCGGACCTT
Downstream 100 bases:
>100_bases GGCCCGCCTCCGGCGTGGTCACGTGATGCTCTGCGCGGGTGCTCCGTCGACGGGGGAGACGTCCGGCTCGCGTCCCAGCA GCGCGGCGAACACGGCCCGG
Product: type 12 methyltransferase
Products: NA
Alternate protein names: S-Adenosyl-L-Methionine-Dependent Methyltransferase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTQRSGSPEGSAAPGLSDGRASAPARISRVRSLAVAVTGGRTFLGARWVRALLALTPPARQPGLALWLLGLAPHYFRGRD RGGEAHRNRVSRELFVRDVLAPFLAPEQDLLDIGCGPGYLARAVAGRVWSVTAVDVSRGVLACARVLNSAVNIDYRTPRE FFGSRRRVDIAVSLAVAEHLGDDELSAMLSSVRPTLRPGGRLLLHVAVADSDTSGEGVPPSAGLAPGLWGRYALPIHPRT RDHLVGLVERAGFSDVELHALGALTDLDDRLTARHLLVATRPHDPVALRTALEFAQARPDSQVGMHVGAGLDARTGPDGV AAVLVDLEERRATA
Sequences:
>Translated_334_residues MTQRSGSPEGSAAPGLSDGRASAPARISRVRSLAVAVTGGRTFLGARWVRALLALTPPARQPGLALWLLGLAPHYFRGRD RGGEAHRNRVSRELFVRDVLAPFLAPEQDLLDIGCGPGYLARAVAGRVWSVTAVDVSRGVLACARVLNSAVNIDYRTPRE FFGSRRRVDIAVSLAVAEHLGDDELSAMLSSVRPTLRPGGRLLLHVAVADSDTSGEGVPPSAGLAPGLWGRYALPIHPRT RDHLVGLVERAGFSDVELHALGALTDLDDRLTARHLLVATRPHDPVALRTALEFAQARPDSQVGMHVGAGLDARTGPDGV AAVLVDLEERRATA >Mature_333_residues TQRSGSPEGSAAPGLSDGRASAPARISRVRSLAVAVTGGRTFLGARWVRALLALTPPARQPGLALWLLGLAPHYFRGRDR GGEAHRNRVSRELFVRDVLAPFLAPEQDLLDIGCGPGYLARAVAGRVWSVTAVDVSRGVLACARVLNSAVNIDYRTPREF FGSRRRVDIAVSLAVAEHLGDDELSAMLSSVRPTLRPGGRLLLHVAVADSDTSGEGVPPSAGLAPGLWGRYALPIHPRTR DHLVGLVERAGFSDVELHALGALTDLDDRLTARHLLVATRPHDPVALRTALEFAQARPDSQVGMHVGAGLDARTGPDGVA AVLVDLEERRATA
Specific function: Unknown
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35485; Mature: 35354
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRSGSPEGSAAPGLSDGRASAPARISRVRSLAVAVTGGRTFLGARWVRALLALTPPAR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCC QPGLALWLLGLAPHYFRGRDRGGEAHRNRVSRELFVRDVLAPFLAPEQDLLDIGCGPGYL CCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHH ARAVAGRVWSVTAVDVSRGVLACARVLNSAVNIDYRTPREFFGSRRRVDIAVSLAVAEHL HHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEHHHHHHHC GDDELSAMLSSVRPTLRPGGRLLLHVAVADSDTSGEGVPPSAGLAPGLWGRYALPIHPRT CCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCC RDHLVGLVERAGFSDVELHALGALTDLDDRLTARHLLVATRPHDPVALRTALEFAQARPD HHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCC SQVGMHVGAGLDARTGPDGVAAVLVDLEERRATA CCCCEEECCCCCCCCCCCCCEEHEEEHHHHCCCC >Mature Secondary Structure TQRSGSPEGSAAPGLSDGRASAPARISRVRSLAVAVTGGRTFLGARWVRALLALTPPAR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCC QPGLALWLLGLAPHYFRGRDRGGEAHRNRVSRELFVRDVLAPFLAPEQDLLDIGCGPGYL CCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHH ARAVAGRVWSVTAVDVSRGVLACARVLNSAVNIDYRTPREFFGSRRRVDIAVSLAVAEHL HHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEHHHHHHHC GDDELSAMLSSVRPTLRPGGRLLLHVAVADSDTSGEGVPPSAGLAPGLWGRYALPIHPRT CCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCC RDHLVGLVERAGFSDVELHALGALTDLDDRLTARHLLVATRPHDPVALRTALEFAQARPD HHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCC SQVGMHVGAGLDARTGPDGVAAVLVDLEERRATA CCCCEEECCCCCCCCCCCCCEEHEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA