| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is smtA [C]
Identifier: 158313966
GI number: 158313966
Start: 2561423
End: 2562247
Strand: Direct
Name: smtA [C]
Synonym: Franean1_2132
Alternate gene names: 158313966
Gene position: 2561423-2562247 (Clockwise)
Preceding gene: 158313964
Following gene: 158313968
Centisome position: 28.52
GC content: 71.15
Gene sequence:
>825_bases ATGACCACGGATCTCAGATACCGCAATGCCGGAAACCCGGCCCTGCTCGATCTTGTCGACATTCCGCCTGGCCGTGCCCT CGACTGTGGCTGCGGCGCGGGCGACAACGCGCGGCGGCTGCGCGAGCGGGGCTGGCGGGTGACCGGGGTGACCCTCGATC CGGCGGAGCTGGCTGCCGCCGCGGCGGAATGCGAGACCGTCAAGCTTGCCGACCTGGCCAAGGGCCTGCCGTTCGCCGCG GACGGGTCGTTCGACCTCGTCCTGCTCTCGCACATCCTGGAACACCTCGTCGATCCGGCACCGCTGCTCGCCGAAGCGCG GCGCGTCCTTGCACCCGGCGGGCGGATCGCCGTCGCTCTGCCGAACGTCGCGCACTTCCGCCAGCGCGCCCAGCACCTCG TAGGCCGGTTCGACTACACCGAGACCGGTGTCATGGACTCCACCCACGTCCGCTTCTTCACTGTCGTGACCGCTCGGCGA CTGCTGGAGGACAACGGGCTCACTGTCCTCGCGGTCGGAGCCAGCGGCGGCCTGCCCCTGTGGCGCAGTCGGCAGTGGCT ACCGGACTCACTGGCCGCACGGGCGGACCGCTGGGCGCTGGAGACTCGACCGAACCTCTTCGCCTGGCAGTCGGTGTTCC TTGTGACGGATGCGCGGACGAGGTCAGCGGGCGCGCCGCAGGGCGCCGCGACGACGGCGATACCGTCCCAACACGAGCCG GACATCAGTTTCGTGCCGAACGCCCCGACGCCACCAGGGGCGCCGGCCACCGGGATCCCGTCACCCGCGCCCGCGAACGA CGAGACCGCCGCCGCATCCACCTAG
Upstream 100 bases:
>100_bases GGCCTCGGTGTGGCGCGACATCCATTACCCTTTGTGTTTGGACAATCTCTTGGTGTAGCTGGACAGCTTGTGTTCGAGTG GGAGCCACAAGGAGTCGCCG
Downstream 100 bases:
>100_bases ACGGTCGAGACGAGGTCCGGCCCACCCGGCGTCAGTCCAACCGGCGGGCCTTGCCTGCGCGTGGGCGGGGTCCCTGTTCG CCGGTCCGACTGCGGGGGAG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Methyltransferase; O-Antigen Biosynthesis Protein; Glycosyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Bifunctional SAM-Dependent Methyltransferase Type; Methyltransferase Small Domain Superfamily; SAM-Dependent O-Methyltransferase
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTTDLRYRNAGNPALLDLVDIPPGRALDCGCGAGDNARRLRERGWRVTGVTLDPAELAAAAAECETVKLADLAKGLPFAA DGSFDLVLLSHILEHLVDPAPLLAEARRVLAPGGRIAVALPNVAHFRQRAQHLVGRFDYTETGVMDSTHVRFFTVVTARR LLEDNGLTVLAVGASGGLPLWRSRQWLPDSLAARADRWALETRPNLFAWQSVFLVTDARTRSAGAPQGAATTAIPSQHEP DISFVPNAPTPPGAPATGIPSPAPANDETAAAST
Sequences:
>Translated_274_residues MTTDLRYRNAGNPALLDLVDIPPGRALDCGCGAGDNARRLRERGWRVTGVTLDPAELAAAAAECETVKLADLAKGLPFAA DGSFDLVLLSHILEHLVDPAPLLAEARRVLAPGGRIAVALPNVAHFRQRAQHLVGRFDYTETGVMDSTHVRFFTVVTARR LLEDNGLTVLAVGASGGLPLWRSRQWLPDSLAARADRWALETRPNLFAWQSVFLVTDARTRSAGAPQGAATTAIPSQHEP DISFVPNAPTPPGAPATGIPSPAPANDETAAAST >Mature_273_residues TTDLRYRNAGNPALLDLVDIPPGRALDCGCGAGDNARRLRERGWRVTGVTLDPAELAAAAAECETVKLADLAKGLPFAAD GSFDLVLLSHILEHLVDPAPLLAEARRVLAPGGRIAVALPNVAHFRQRAQHLVGRFDYTETGVMDSTHVRFFTVVTARRL LEDNGLTVLAVGASGGLPLWRSRQWLPDSLAARADRWALETRPNLFAWQSVFLVTDARTRSAGAPQGAATTAIPSQHEPD ISFVPNAPTPPGAPATGIPSPAPANDETAAAST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29054; Mature: 28923
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDLRYRNAGNPALLDLVDIPPGRALDCGCGAGDNARRLRERGWRVTGVTLDPAELAAA CCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHCCCEEEEEEECHHHHHHH AAECETVKLADLAKGLPFAADGSFDLVLLSHILEHLVDPAPLLAEARRVLAPGGRIAVAL HHHCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEC PNVAHFRQRAQHLVGRFDYTETGVMDSTHVRFFTVVTARRLLEDNGLTVLAVGASGGLPL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC WRSRQWLPDSLAARADRWALETRPNLFAWQSVFLVTDARTRSAGAPQGAATTAIPSQHEP CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCC DISFVPNAPTPPGAPATGIPSPAPANDETAAAST CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTDLRYRNAGNPALLDLVDIPPGRALDCGCGAGDNARRLRERGWRVTGVTLDPAELAAA CCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHCCCEEEEEEECHHHHHHH AAECETVKLADLAKGLPFAADGSFDLVLLSHILEHLVDPAPLLAEARRVLAPGGRIAVAL HHHCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEC PNVAHFRQRAQHLVGRFDYTETGVMDSTHVRFFTVVTARRLLEDNGLTVLAVGASGGLPL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC WRSRQWLPDSLAARADRWALETRPNLFAWQSVFLVTDARTRSAGAPQGAATTAIPSQHEP CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCC DISFVPNAPTPPGAPATGIPSPAPANDETAAAST CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA