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The map label for this gene is sufB [H]

Identifier: 158313920

GI number: 158313920

Start: 2510784

End: 2512196

Strand: Direct

Name: sufB [H]

Synonym: Franean1_2085

Alternate gene names: 158313920

Gene position: 2510784-2512196 (Clockwise)

Preceding gene: 158313919

Following gene: 158313921

Centisome position: 27.95

GC content: 66.38

Gene sequence:

>1413_bases
ATGACCACCTCTGCCGAGACCGCCCTTGAGGGCCTTGGCTCCTACCGGTTCGGCTGGGCGGATGCGGACGCCTATGCCGT
CGACGTGGAACGTGGCCTCTCCGAGGCGGTCGTACGTAGCATCTCGGCGAAGAAGAACGAGCCGTCCTGGATGACGGACC
TGCGGCTGAAGGGCCTGAAGCTCTTCGAGCGCAAGCCCATGCCGACCTGGGGCGCGGACCTGTCCGGCATCCACTTCGAC
AACATCAAGTACTTCGTCAGGTCGACGGAGAAGCAGGCCGAGGAGTGGGCGGACCTGCCGGAGGAGATCCGGGCCACCTA
CGACCGGCTCGGCATCCCCGAGGCGGAGAAGCAGCGGCTGATCTCCGGTGTCGCGGCCCAGTACGAGTCGGAGGTCGTCT
ACCACAAGATCCGTGAGGACCTCGAGGAGCAGGGCGTCATCTTCCTGGACACCGACTCGGGGCTGCGCGAGCACCCGGAG
ATCTTCCAGGAGTACTTCGGCTCGGTGATCCCGGTCGGCGACAACAAGTTCGCCGCGCTGAACACCTCGGTGTGGTCGGG
TGGCTCGTTCATCTACGTCCCGCCGGGCGTGCAGGTCGAGATCCCGCTGCAGGCCTACTTCCGGATCAACACCGAGAACA
TGGGCCAGTTCGAGCGCACCCTGATCATCGTGGACGAGGGCGCCTACGTCCACTACGTCGAGGGCTGCACCGCGCCGGTC
TACTCGTCGGACTCGCTGCACTCCGCGGTCGTCGAGATCGTCGTGAAGAAGAACGCCCGCTGCCGGTACACGACCATCCA
GAACTGGTCGAACAACGTCTACAACCTGGTCACGAAGCGGGCCGCCTGCCACGAGGGCGCCACGATGGAGTGGATCGACG
GCAACATCGGCTCCAAGGTGACGATGAAGTACCCGGCGGTGTGGCTGCTCGGCGAGCAGGCCCACGGCGAGGTCCTCTCG
ATCGCCTTCGCAGGTGAGGGCCAGCACCAGGACGCCGGCGCCAAGATGGTGCACGCCGCGCCGCGCACCTCGTCCAAGAT
CGTCTCGAAGTCGGTGGCCCGCGGCGGCGGCCGGACCTCGTACCGTGGCCTGGTCCAGATCAACGAGGGCTCGCACGCCT
CGCGGTCGACGGTGAAGTGTGACGCGCTGCTGGTCGACACGGTCAGCCGCTCCGACACCTACCCCTATGTCGACGTGCGC
GAGGACGACGCCTCCATCGGGCACGAGGCCAGCGTCTCCAAGGTCGGCGAGGACCAGCTCTTCTACCTGATGAGCCGCGG
TCTGTCCGAGGACGAGGCGATGGCCATGGTGGTGCGCGGCTTCATCGAGCCGGTCGCCCGCGAGCTGCCCATGGAGTACG
CCCTCGAACTCAACCGGCTCATCGAGCTCCAGATGGAAGGCGCAGTCGGCTGA

Upstream 100 bases:

>100_bases
TGCTCTCGCCGTCGGGGCCCTCCGGGCCAGCGGGCGCGGCGCCCGACAGGACCCCGTCCGGGCAGACATCACAACCATCC
ACCTTTCCGGAAGGTTCTCT

Downstream 100 bases:

>100_bases
TGGCCGTCATCGATGCCACGGGACGCCCCCCGGCCCAGGCCGGCGCGGCTCCGCGTCCCGTTCGGTCCCGTGACCCCGAG
GACCACGCAGTACCCGGCGG

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MTTSAETALEGLGSYRFGWADADAYAVDVERGLSEAVVRSISAKKNEPSWMTDLRLKGLKLFERKPMPTWGADLSGIHFD
NIKYFVRSTEKQAEEWADLPEEIRATYDRLGIPEAEKQRLISGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPE
IFQEYFGSVIPVGDNKFAALNTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPV
YSSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTKRAACHEGATMEWIDGNIGSKVTMKYPAVWLLGEQAHGEVLS
IAFAGEGQHQDAGAKMVHAAPRTSSKIVSKSVARGGGRTSYRGLVQINEGSHASRSTVKCDALLVDTVSRSDTYPYVDVR
EDDASIGHEASVSKVGEDQLFYLMSRGLSEDEAMAMVVRGFIEPVARELPMEYALELNRLIELQMEGAVG

Sequences:

>Translated_470_residues
MTTSAETALEGLGSYRFGWADADAYAVDVERGLSEAVVRSISAKKNEPSWMTDLRLKGLKLFERKPMPTWGADLSGIHFD
NIKYFVRSTEKQAEEWADLPEEIRATYDRLGIPEAEKQRLISGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPE
IFQEYFGSVIPVGDNKFAALNTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPV
YSSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTKRAACHEGATMEWIDGNIGSKVTMKYPAVWLLGEQAHGEVLS
IAFAGEGQHQDAGAKMVHAAPRTSSKIVSKSVARGGGRTSYRGLVQINEGSHASRSTVKCDALLVDTVSRSDTYPYVDVR
EDDASIGHEASVSKVGEDQLFYLMSRGLSEDEAMAMVVRGFIEPVARELPMEYALELNRLIELQMEGAVG
>Mature_469_residues
TTSAETALEGLGSYRFGWADADAYAVDVERGLSEAVVRSISAKKNEPSWMTDLRLKGLKLFERKPMPTWGADLSGIHFDN
IKYFVRSTEKQAEEWADLPEEIRATYDRLGIPEAEKQRLISGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPEI
FQEYFGSVIPVGDNKFAALNTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPVY
SSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTKRAACHEGATMEWIDGNIGSKVTMKYPAVWLLGEQAHGEVLSI
AFAGEGQHQDAGAKMVHAAPRTSSKIVSKSVARGGGRTSYRGLVQINEGSHASRSTVKCDALLVDTVSRSDTYPYVDVRE
DDASIGHEASVSKVGEDQLFYLMSRGLSEDEAMAMVVRGFIEPVARELPMEYALELNRLIELQMEGAVG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=465, Percent_Identity=40.2150537634409, Blast_Score=377, Evalue=1e-106,
Organism=Escherichia coli, GI1787971, Length=146, Percent_Identity=23.972602739726, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52121; Mature: 51990

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSAETALEGLGSYRFGWADADAYAVDVERGLSEAVVRSISAKKNEPSWMTDLRLKGLK
CCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LFERKPMPTWGADLSGIHFDNIKYFVRSTEKQAEEWADLPEEIRATYDRLGIPEAEKQRL
HHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
ISGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPEIFQEYFGSVIPVGDNKFAAL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCEEECCCCCEEEE
NTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPV
ECCEECCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCC
YSSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTKRAACHEGATMEWIDGNIGSKV
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEE
TMKYPAVWLLGEQAHGEVLSIAFAGEGQHQDAGAKMVHAAPRTSSKIVSKSVARGGGRTS
EEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
YRGLVQINEGSHASRSTVKCDALLVDTVSRSDTYPYVDVREDDASIGHEASVSKVGEDQL
CEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHH
FYLMSRGLSEDEAMAMVVRGFIEPVARELPMEYALELNRLIELQMEGAVG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
TTSAETALEGLGSYRFGWADADAYAVDVERGLSEAVVRSISAKKNEPSWMTDLRLKGLK
CCCHHHHHHHCCCCCCCCCCCCEEEEEHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LFERKPMPTWGADLSGIHFDNIKYFVRSTEKQAEEWADLPEEIRATYDRLGIPEAEKQRL
HHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
ISGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPEIFQEYFGSVIPVGDNKFAAL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCEEECCCCCEEEE
NTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPV
ECCEECCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCC
YSSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTKRAACHEGATMEWIDGNIGSKV
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEE
TMKYPAVWLLGEQAHGEVLSIAFAGEGQHQDAGAKMVHAAPRTSSKIVSKSVARGGGRTS
EEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
YRGLVQINEGSHASRSTVKCDALLVDTVSRSDTYPYVDVREDDASIGHEASVSKVGEDQL
CEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHH
FYLMSRGLSEDEAMAMVVRGFIEPVARELPMEYALELNRLIELQMEGAVG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]