Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158313919

Identifier: 158313919

GI number: 158313919

Start: 2509912

End: 2510787

Strand: Direct

Name: 158313919

Synonym: Franean1_2084

Alternate gene names: NA

Gene position: 2509912-2510787 (Clockwise)

Preceding gene: 158313912

Following gene: 158313920

Centisome position: 27.94

GC content: 72.26

Gene sequence:

>876_bases
ATGAAGGAGATCACGGGCCCGTCAGGTGGGCGACGGCCGCCTCGGTTCGACCACGTCCTGGAAATAGGGCACACTGGTGT
TGTGAAAAGCGAGCAGGAGAAGGTCGGGCAGGAGGTGTCCACGGGTGTGACCGACGGTCGCACCCGGGATCGCCTCGTGC
GGCTCCTGCTCGAACGCGGCCCGTCCACAGCCGCGGACCTCTCGCACGAGCTCGGGCTGTCGCCCGCGGCCGTCCGCCGG
CATCTCGACGCGATGACCTCGGACGGCACCATAACGACTACATCGACCGTGGTCCACGGCCGGCGCGGGCGGGGCCGGCC
GGCCCGGCGCTACACCCTCACCGAGGCCGGGCACCAGGCCGGCCCCACGGCCTACTCCGACCTGGCCGCCGGCGCGCTGC
TGTTCCTCGCGGACGCCTGCGGCCCCGACGCGGTGGCCGAGTTCGCCCGGGCACGCGGGGTCGATCTGGAACGGCGGATC
CGCGACGAGGTCGTCGCCGTGCCGCCGGCGGAGCGCCCGGAGGCGATCGCCGCGGCCATGACCCAGGCCGGGTACACGGC
CAGCGTCTCCGAGCTGCCGAGCGGTACCCAGATCTGCCAGCACCACTGCCCGGTGCAGCACGTGGCCGAGCGCTTCCCCG
CGCTGTGCGAGGCCGAGACGGCGATGTTGGCGCGGCTCCTCGACACGCACGTGCAGCGCCTAGCCACGATCGCCCACGGC
GACGGCGTCTGCACCACACACATACCGGTGATCCCGGTGGAGTCGATCACGGTGCTCTCGCCGTCGGGGCCCTCCGGGCC
AGCGGGCGCGGCGCCCGACAGGACCCCGTCCGGGCAGACATCACAACCATCCACCTTTCCGGAAGGTTCTCTATGA

Upstream 100 bases:

>100_bases
GCGAAGTGTCCCATCCGCCTGTGGGAGGGGTCCGATCGGGTATGTCCGAAGCGGTCACATGTGACCTGGCAGACCCGACT
TCTGTCGGTGACCCGACCCT

Downstream 100 bases:

>100_bases
CCACCTCTGCCGAGACCGCCCTTGAGGGCCTTGGCTCCTACCGGTTCGGCTGGGCGGATGCGGACGCCTATGCCGTCGAC
GTGGAACGTGGCCTCTCCGA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein ArsR; ArsR Transcriptional Regulator; SufR Family Transcriptional Regulator; Arsr Family Transcriptional Regulator; ArsR Family Regulator; Transcriptional Regulator ArsR Family; DeoR Family Transcriptional Regulator

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKEITGPSGGRRPPRFDHVLEIGHTGVVKSEQEKVGQEVSTGVTDGRTRDRLVRLLLERGPSTAADLSHELGLSPAAVRR
HLDAMTSDGTITTTSTVVHGRRGRGRPARRYTLTEAGHQAGPTAYSDLAAGALLFLADACGPDAVAEFARARGVDLERRI
RDEVVAVPPAERPEAIAAAMTQAGYTASVSELPSGTQICQHHCPVQHVAERFPALCEAETAMLARLLDTHVQRLATIAHG
DGVCTTHIPVIPVESITVLSPSGPSGPAGAAPDRTPSGQTSQPSTFPEGSL

Sequences:

>Translated_291_residues
MKEITGPSGGRRPPRFDHVLEIGHTGVVKSEQEKVGQEVSTGVTDGRTRDRLVRLLLERGPSTAADLSHELGLSPAAVRR
HLDAMTSDGTITTTSTVVHGRRGRGRPARRYTLTEAGHQAGPTAYSDLAAGALLFLADACGPDAVAEFARARGVDLERRI
RDEVVAVPPAERPEAIAAAMTQAGYTASVSELPSGTQICQHHCPVQHVAERFPALCEAETAMLARLLDTHVQRLATIAHG
DGVCTTHIPVIPVESITVLSPSGPSGPAGAAPDRTPSGQTSQPSTFPEGSL
>Mature_291_residues
MKEITGPSGGRRPPRFDHVLEIGHTGVVKSEQEKVGQEVSTGVTDGRTRDRLVRLLLERGPSTAADLSHELGLSPAAVRR
HLDAMTSDGTITTTSTVVHGRRGRGRPARRYTLTEAGHQAGPTAYSDLAAGALLFLADACGPDAVAEFARARGVDLERRI
RDEVVAVPPAERPEAIAAAMTQAGYTASVSELPSGTQICQHHCPVQHVAERFPALCEAETAMLARLLDTHVQRLATIAHG
DGVCTTHIPVIPVESITVLSPSGPSGPAGAAPDRTPSGQTSQPSTFPEGSL

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30597; Mature: 30597

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEITGPSGGRRPPRFDHVLEIGHTGVVKSEQEKVGQEVSTGVTDGRTRDRLVRLLLERG
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PSTAADLSHELGLSPAAVRRHLDAMTSDGTITTTSTVVHGRRGRGRPARRYTLTEAGHQA
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCEEEHHHCCCCC
GPTAYSDLAAGALLFLADACGPDAVAEFARARGVDLERRIRDEVVAVPPAERPEAIAAAM
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCHHHHHHHH
TQAGYTASVSELPSGTQICQHHCPVQHVAERFPALCEAETAMLARLLDTHVQRLATIAHG
HHCCCCCCHHHCCCHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGVCTTHIPVIPVESITVLSPSGPSGPAGAAPDRTPSGQTSQPSTFPEGSL
CCEEECCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEITGPSGGRRPPRFDHVLEIGHTGVVKSEQEKVGQEVSTGVTDGRTRDRLVRLLLERG
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PSTAADLSHELGLSPAAVRRHLDAMTSDGTITTTSTVVHGRRGRGRPARRYTLTEAGHQA
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCEEEHHHCCCCC
GPTAYSDLAAGALLFLADACGPDAVAEFARARGVDLERRIRDEVVAVPPAERPEAIAAAM
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCHHHHHHHH
TQAGYTASVSELPSGTQICQHHCPVQHVAERFPALCEAETAMLARLLDTHVQRLATIAHG
HHCCCCCCHHHCCCHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGVCTTHIPVIPVESITVLSPSGPSGPAGAAPDRTPSGQTSQPSTFPEGSL
CCEEECCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA