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The map label for this gene is sufD [C]

Identifier: 158313921

GI number: 158313921

Start: 2512196

End: 2513341

Strand: Direct

Name: sufD [C]

Synonym: Franean1_2086

Alternate gene names: 158313921

Gene position: 2512196-2513341 (Clockwise)

Preceding gene: 158313920

Following gene: 158313922

Centisome position: 27.97

GC content: 73.65

Gene sequence:

>1146_bases
ATGGCCGTCATCGATGCCACGGGACGCCCCCCGGCCCAGGCCGGCGCGGCTCCGCGTCCCGTTCGGTCCCGTGACCCCGA
GGACCACGCAGTACCCGGCGGTCGCGAGGAGGCGTGGCGGTTCACCCCGCTGCGCCGCCTGCGCGGCCTGCTCAACGGCC
CCGTCGCCGACTCCAAGGTCGACGTCTCGGTCTCCGCGCCGGACGGCGTCGAGATCGAGCGGCTCGCCCCGACCGACTCC
CGGATCGGGCGCGTGCTCACCCCGGCGGACCGCCCGGCGGCGTTCGCCATCGCCCGTTCGGACGGCGGCCTGTCCGTCAC
CGTCCCGGCCGAGGCCGCACTCACCGAGCCGGTGGTCGTGAACCTGCGGGGCAACGGCGGCGTCTGCTACGAGCACGTGC
TCGTCGAGCTCGGCCCGTTCGCCACGGCGACGGTTGTGCTCGACCACACCGGCAGCGCCACCTTCGCCGGCAACGTCGAG
GTGTTCATCGGCCACGGCGCCGCGCTGACGTTCGTCACCGTCCAGGACTGGTCGGCGGACTCCGTCCACCTCGGCGCGCA
CGCCTACTCGGTGGGTCGCGACGCGCGCCTGCGCTCGTTCACCATCACCCTGGGCGGCGACCTCGTCCGGCTGAACCCGA
CCGTGGACTACCGCGGCCCCGGTGGCGACGCCGAACTCTACGGCCTGTTCTTCACCGAGGCGGGCCAGCACCAGGAGCAC
CGCCTGCTGGTGACCCACGAGGCGCGGTCCTGCCGCAGCCGGGTCACCTACAAGGGCGCGCTGCAGGGCGAGGGCGCGCA
CGCGGTGTGGATCGGCGATGTCGTGATCGGCGCCGACGCTGTCGGCACCGACACCTACGAGCTGAACCGCAACCTGGTGC
TCACCGACGGCGCGCGCGCCGACTCGGTGCCCAACCTGGAGATCCTCACCGGGGAGGTCGCCGGCGCCGGCCACGCCAGC
GCGACCGGCCGCTTCGACGACGAGGCGCTGTTCTACCTGATGTCACGCGGCATCCCCGCCGACGAGGCCCGCCGCCTGGT
GGTCCGCGGCTTCTTCGCCGAGATCATCGACCGGGTCGACCTCCCCGAGCTGCGCGAGCGCATCATGAGCCGGGTCGAGG
AGGAGCTGGCGGCGGTGGGCGCATGA

Upstream 100 bases:

>100_bases
TGCGCGGCTTCATCGAGCCGGTCGCCCGCGAGCTGCCCATGGAGTACGCCCTCGAACTCAACCGGCTCATCGAGCTCCAG
ATGGAAGGCGCAGTCGGCTG

Downstream 100 bases:

>100_bases
CCACGCCCAACAGTGCGGGCACAGCCACACGCTGGCGGCGCGCCTGCGCCGCCGCCGACCTGGCCGACGAGACGGCGCTC
GGCGTCGAGATCGACGGCGA

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAVIDATGRPPAQAGAAPRPVRSRDPEDHAVPGGREEAWRFTPLRRLRGLLNGPVADSKVDVSVSAPDGVEIERLAPTDS
RIGRVLTPADRPAAFAIARSDGGLSVTVPAEAALTEPVVVNLRGNGGVCYEHVLVELGPFATATVVLDHTGSATFAGNVE
VFIGHGAALTFVTVQDWSADSVHLGAHAYSVGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGLFFTEAGQHQEH
RLLVTHEARSCRSRVTYKGALQGEGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARADSVPNLEILTGEVAGAGHAS
ATGRFDDEALFYLMSRGIPADEARRLVVRGFFAEIIDRVDLPELRERIMSRVEEELAAVGA

Sequences:

>Translated_381_residues
MAVIDATGRPPAQAGAAPRPVRSRDPEDHAVPGGREEAWRFTPLRRLRGLLNGPVADSKVDVSVSAPDGVEIERLAPTDS
RIGRVLTPADRPAAFAIARSDGGLSVTVPAEAALTEPVVVNLRGNGGVCYEHVLVELGPFATATVVLDHTGSATFAGNVE
VFIGHGAALTFVTVQDWSADSVHLGAHAYSVGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGLFFTEAGQHQEH
RLLVTHEARSCRSRVTYKGALQGEGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARADSVPNLEILTGEVAGAGHAS
ATGRFDDEALFYLMSRGIPADEARRLVVRGFFAEIIDRVDLPELRERIMSRVEEELAAVGA
>Mature_380_residues
AVIDATGRPPAQAGAAPRPVRSRDPEDHAVPGGREEAWRFTPLRRLRGLLNGPVADSKVDVSVSAPDGVEIERLAPTDSR
IGRVLTPADRPAAFAIARSDGGLSVTVPAEAALTEPVVVNLRGNGGVCYEHVLVELGPFATATVVLDHTGSATFAGNVEV
FIGHGAALTFVTVQDWSADSVHLGAHAYSVGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGLFFTEAGQHQEHR
LLVTHEARSCRSRVTYKGALQGEGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARADSVPNLEILTGEVAGAGHASA
TGRFDDEALFYLMSRGIPADEARRLVVRGFFAEIIDRVDLPELRERIMSRVEEELAAVGA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=388, Percent_Identity=25.5154639175258, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 40478; Mature: 40347

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIDATGRPPAQAGAAPRPVRSRDPEDHAVPGGREEAWRFTPLRRLRGLLNGPVADSKV
CEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEE
DVSVSAPDGVEIERLAPTDSRIGRVLTPADRPAAFAIARSDGGLSVTVPAEAALTEPVVV
EEEEECCCCCEEEEECCCHHHCCEEECCCCCCEEEEEEECCCCEEEEECCHHHCCCCEEE
NLRGNGGVCYEHVLVELGPFATATVVLDHTGSATFAGNVEVFIGHGAALTFVTVQDWSAD
EEECCCCEEHHHHHHHCCCCEEEEEEEECCCCEEEECCEEEEEECCCEEEEEEEECCCCC
SVHLGAHAYSVGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGLFFTEAGQHQEH
CEEECCEEEECCCCCEEEEEEEEECCCEEEECCCEEECCCCCCCEEEEEEEECCCCCCCC
RLLVTHEARSCRSRVTYKGALQGEGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARA
EEEEEECHHHHHHCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCEEEECCCCC
DSVPNLEILTGEVAGAGHASATGRFDDEALFYLMSRGIPADEARRLVVRGFFAEIIDRVD
CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
LPELRERIMSRVEEELAAVGA
CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVIDATGRPPAQAGAAPRPVRSRDPEDHAVPGGREEAWRFTPLRRLRGLLNGPVADSKV
EEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEE
DVSVSAPDGVEIERLAPTDSRIGRVLTPADRPAAFAIARSDGGLSVTVPAEAALTEPVVV
EEEEECCCCCEEEEECCCHHHCCEEECCCCCCEEEEEEECCCCEEEEECCHHHCCCCEEE
NLRGNGGVCYEHVLVELGPFATATVVLDHTGSATFAGNVEVFIGHGAALTFVTVQDWSAD
EEECCCCEEHHHHHHHCCCCEEEEEEEECCCCEEEECCEEEEEECCCEEEEEEEECCCCC
SVHLGAHAYSVGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGLFFTEAGQHQEH
CEEECCEEEECCCCCEEEEEEEEECCCEEEECCCEEECCCCCCCEEEEEEEECCCCCCCC
RLLVTHEARSCRSRVTYKGALQGEGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARA
EEEEEECHHHHHHCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCEEEECCCCC
DSVPNLEILTGEVAGAGHASATGRFDDEALFYLMSRGIPADEARRLVVRGFFAEIIDRVD
CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
LPELRERIMSRVEEELAAVGA
CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]