| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is hisC [H]
Identifier: 158313752
GI number: 158313752
Start: 2298308
End: 2299669
Strand: Direct
Name: hisC [H]
Synonym: Franean1_1917
Alternate gene names: 158313752
Gene position: 2298308-2299669 (Clockwise)
Preceding gene: 158313751
Following gene: 158313753
Centisome position: 25.59
GC content: 75.4
Gene sequence:
>1362_bases ATGACCGGGAACATCAGCGGAGCGGGTGACGGCGCCCCCTCGGGCGACAGCCCCGGCCTGGGCGACAGCCCCGGCCTGGG TGACGGCGCCGGCCTGGGTGACGGCGCAGGTCCCAGCGGGGTGCTCCCGGGGGCGCCGGCCGGCCAGGGCGCGCCCGTCG GTGGCCGCGGGCGGCTGCGCTCCGCTGCGGCCACCCCGGCCGACCGTGCCCCGTGGCGGCCCGTCACCCTGGACGACCTG CCCCTGCGTGACGACCTGCGGGGGATGTCGCCCTACGGCGCGCCCCAGATCGACGTCCCGGTGCGGCTGAACACCAACGA GAACCCGCACCCGCCGTCCGCCGGGCTCGTGGACGCGCTCGGCAAGGCCGCGACCCTCGCCGCGACCGAGGCCAACCGCT ATCCCGACCGGGAGGCCGAGGCTCTGCGCGCCGATCTGGCGTACTACCTGACCCCGGACGCCGGTTTCGGCGTGCACGCG GCCCAGGTGTGGGCGGCCAACGGGTCGAACGAGATCCTCCAGCAGCTCTGCCAGGCGTTCGGCGGTCCGGGGCGGGTGGC GGTGGGCTTCGAGCCGTCCTACTCGATGCACCGGCTGATCGCGCTGGCGACCGCCACCGGCTGGGTCGCCGAGTCCCGCG CGGCGGACTTCACCCTCGACGCCGACCGGGTCACCGCCGCGATCCGCCGGTACCGCCCGGCGCTGCTGTTCCTGTGCTCG CCGAACAACCCCACCGCCACCGCGCTCGGCGCGGAGGTCATCGCGGCCGCCTGCGACGCCATGGCCGAGGTCGGCTCGGG TGTCGTCGTGGTCGACGAGGCCTACGGCGAGTTCCGCCGGGCCGGCGTCCCCAGCGCGCTCACCCTGCTGCCCGACCACC CTCGGCTGGTCGTCACCCGGACGATGAGCAAGGCGTTCGCGTTGGCCGGCGCCAGGGTCGGCTACCTCGCGGCGCATCCG GCGGTTGTCGACGCGCTGCAGCTCGTCCGCCTGCCCTACCACCTGTCGTCGTTCACCCAGGCGGTCGCGCGCACCGCGCT CGCCCACGCCGACGAGCTGCTCGGCACAGTGGACGCGGTGAAGGCACAGCGCGACCTGCTCGTCCGGTCCCTGCCGGAGT TCGGCTGCGTGACCGCTCCGAGCGACGCCAACTTCGTGCTGTTCGGCCACTTCACCGACCAGCGCGCCGTGTGGCAGGGC CTGCTCGACGCCGGCGTGCTCGTCCGCGACGTCGGCCTCGACGGCTGGCTGCGGGTGACGGCCGGCCTGCCGAACGAGAC AGAGTCCTTCCTCGACGCGCTGCGCCGGGTGCTGACCGCCCGCCCGGCCCTCCTGCGCGCCGCCGCGGAGATCAGCTCCT GA
Upstream 100 bases:
>100_bases GCGGCCCCGAGGCGCTCGCCGACGTCGCGCCCCGCATCGCCGCGCTCGGCGGAGCCGAGGACCTGATCGCCCACGTCGAC GCGGTGGAGGTACGGGCCCG
Downstream 100 bases:
>100_bases CCGACCGGGCCGGACCGACCCGACCCGACCCGAACATCCGGACCGACCCGAACATCCGGACCGGTACGACCGCCCGGACC GACCAAACAGCCAGCCGGCC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTGNISGAGDGAPSGDSPGLGDSPGLGDGAGLGDGAGPSGVLPGAPAGQGAPVGGRGRLRSAAATPADRAPWRPVTLDDL PLRDDLRGMSPYGAPQIDVPVRLNTNENPHPPSAGLVDALGKAATLAATEANRYPDREAEALRADLAYYLTPDAGFGVHA AQVWAANGSNEILQQLCQAFGGPGRVAVGFEPSYSMHRLIALATATGWVAESRAADFTLDADRVTAAIRRYRPALLFLCS PNNPTATALGAEVIAAACDAMAEVGSGVVVVDEAYGEFRRAGVPSALTLLPDHPRLVVTRTMSKAFALAGARVGYLAAHP AVVDALQLVRLPYHLSSFTQAVARTALAHADELLGTVDAVKAQRDLLVRSLPEFGCVTAPSDANFVLFGHFTDQRAVWQG LLDAGVLVRDVGLDGWLRVTAGLPNETESFLDALRRVLTARPALLRAAAEISS
Sequences:
>Translated_453_residues MTGNISGAGDGAPSGDSPGLGDSPGLGDGAGLGDGAGPSGVLPGAPAGQGAPVGGRGRLRSAAATPADRAPWRPVTLDDL PLRDDLRGMSPYGAPQIDVPVRLNTNENPHPPSAGLVDALGKAATLAATEANRYPDREAEALRADLAYYLTPDAGFGVHA AQVWAANGSNEILQQLCQAFGGPGRVAVGFEPSYSMHRLIALATATGWVAESRAADFTLDADRVTAAIRRYRPALLFLCS PNNPTATALGAEVIAAACDAMAEVGSGVVVVDEAYGEFRRAGVPSALTLLPDHPRLVVTRTMSKAFALAGARVGYLAAHP AVVDALQLVRLPYHLSSFTQAVARTALAHADELLGTVDAVKAQRDLLVRSLPEFGCVTAPSDANFVLFGHFTDQRAVWQG LLDAGVLVRDVGLDGWLRVTAGLPNETESFLDALRRVLTARPALLRAAAEISS >Mature_452_residues TGNISGAGDGAPSGDSPGLGDSPGLGDGAGLGDGAGPSGVLPGAPAGQGAPVGGRGRLRSAAATPADRAPWRPVTLDDLP LRDDLRGMSPYGAPQIDVPVRLNTNENPHPPSAGLVDALGKAATLAATEANRYPDREAEALRADLAYYLTPDAGFGVHAA QVWAANGSNEILQQLCQAFGGPGRVAVGFEPSYSMHRLIALATATGWVAESRAADFTLDADRVTAAIRRYRPALLFLCSP NNPTATALGAEVIAAACDAMAEVGSGVVVVDEAYGEFRRAGVPSALTLLPDHPRLVVTRTMSKAFALAGARVGYLAAHPA VVDALQLVRLPYHLSSFTQAVARTALAHADELLGTVDAVKAQRDLLVRSLPEFGCVTAPSDANFVLFGHFTDQRAVWQGL LDAGVLVRDVGLDGWLRVTAGLPNETESFLDALRRVLTARPALLRAAAEISS
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=375, Percent_Identity=30.4, Blast_Score=137, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6322075, Length=386, Percent_Identity=24.6113989637306, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 46864; Mature: 46733
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNISGAGDGAPSGDSPGLGDSPGLGDGAGLGDGAGPSGVLPGAPAGQGAPVGGRGRLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAAATPADRAPWRPVTLDDLPLRDDLRGMSPYGAPQIDVPVRLNTNENPHPPSAGLVDAL HHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH GKAATLAATEANRYPDREAEALRADLAYYLTPDAGFGVHAAQVWAANGSNEILQQLCQAF CCHHEEEEHHCCCCCCHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHH GGPGRVAVGFEPSYSMHRLIALATATGWVAESRAADFTLDADRVTAAIRRYRPALLFLCS CCCCEEEEECCCCHHHHHHHHHHHHHCHHHHCCCCCEEECHHHHHHHHHHCCCEEEEEEC PNNPTATALGAEVIAAACDAMAEVGSGVVVVDEAYGEFRRAGVPSALTLLPDHPRLVVTR CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCEEEECCCCCCEEEEH TMSKAFALAGARVGYLAAHPAVVDALQLVRLPYHLSSFTQAVARTALAHADELLGTVDAV HHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAQRDLLVRSLPEFGCVTAPSDANFVLFGHFTDQRAVWQGLLDAGVLVRDVGLDGWLRVT HHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHCCEEEECCCCCEEEEE AGLPNETESFLDALRRVLTARPALLRAAAEISS CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure TGNISGAGDGAPSGDSPGLGDSPGLGDGAGLGDGAGPSGVLPGAPAGQGAPVGGRGRLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAAATPADRAPWRPVTLDDLPLRDDLRGMSPYGAPQIDVPVRLNTNENPHPPSAGLVDAL HHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH GKAATLAATEANRYPDREAEALRADLAYYLTPDAGFGVHAAQVWAANGSNEILQQLCQAF CCHHEEEEHHCCCCCCHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHH GGPGRVAVGFEPSYSMHRLIALATATGWVAESRAADFTLDADRVTAAIRRYRPALLFLCS CCCCEEEEECCCCHHHHHHHHHHHHHCHHHHCCCCCEEECHHHHHHHHHHCCCEEEEEEC PNNPTATALGAEVIAAACDAMAEVGSGVVVVDEAYGEFRRAGVPSALTLLPDHPRLVVTR CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCEEEECCCCCCEEEEH TMSKAFALAGARVGYLAAHPAVVDALQLVRLPYHLSSFTQAVARTALAHADELLGTVDAV HHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAQRDLLVRSLPEFGCVTAPSDANFVLFGHFTDQRAVWQGLLDAGVLVRDVGLDGWLRVT HHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHCCEEEECCCCCEEEEE AGLPNETESFLDALRRVLTARPALLRAAAEISS CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA