| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is hisD [H]
Identifier: 158313751
GI number: 158313751
Start: 2297016
End: 2298311
Strand: Direct
Name: hisD [H]
Synonym: Franean1_1916
Alternate gene names: 158313751
Gene position: 2297016-2298311 (Clockwise)
Preceding gene: 158313749
Following gene: 158313752
Centisome position: 25.57
GC content: 76.31
Gene sequence:
>1296_bases GTGCTCAGAAGGCTCGATCTGCGCTCCGCGCAGCCCACCATGTCGGACGTCCGTCGGCTCTTCCCGCGGGCGGCCGTGGA CGTCGACGTCGCGATGGACGCGGTCCGCCCCGTCTGCGACGACGTGCGCGACCGTGGTGACGCGGCCGTCCTCGACGCCG CGGAGCGCTTCGACCGGGTCCGCCCGGCCGAGCTGCGGGTACCGGCCGACGCGCTCGCGAGCGCGCTCGCGGCCCTCGGC CCGGCGGTCCGTGACGCGCTGACCGAGGCGATCCGCCGCGCGCGGCTGGTGCACCGGGCCCAGCTCCGGGAGCCGGTGGT CGTCGAGGTGGCCCCCGGCACGAAGGTCACCGAGCGCTGGATCCCGGTCGGCCGGGTCGGCCTCTACGTGCCGGGCGGGC GGGTCGCCTACCCCAGCAGCGTGGTCATGAACGTCGTCCCCGCGCAGGAGGCCGGCGTCGCCTCGCTGGCGGTGACCTCG CCGCCCCAGGTCGACAACGGCGGCCTGCCGCATCCGGTCGTACTGGCCGCCTGCGCCCTGCTCGGGGTCGACGAGGTCTA CGCGGCCGGCGGCGCCCAGGCCGTCGCGATGTTCGCGCACGGCACCGAGAGCTGCCCGGCCGTCGATGTCGTCACCGGCC CCGGCAACGTCTACGTCACCGCGGCGAAGCGGCTGCTGCGCGGGCTGGTCGGCGTCGACGCCGAGGCGGGCCCGACCGAG GTCGCCATTCTCGCCGACGGCTCGGCCCGCCCCGACTTCGTCGCCGCCGACCTGATCGCGCAGGCCGAGCACGACCCGAT GGCCGCCTGCCTGCTGGTCACGACGTCGCCAGAGCTGGCCGACGCCGTCGACGTCGAGCTCGACAAGCAGGTCCCCGCCA CCCGGCACCGGGAGCGGGTCACTGAGGCGCTGGCCGGCCAGGGCGCCGTGGCGATCGTCGCCGACGTCGACGCGGGTCTC GCGGTCGTCGACGCCTGGGCCGCCGAGCACCTGGAGATCCACACCGCGGACGCGGCGGGTGTCGCCGCCCGGGTGCGCAA CGCGGGCGCGATCTTCGTCGGCGCCTACGCGCCCGTGCCACTCGGGGACTACCTCGCCGGCTCGAACCACGTCCTGCCCA CCGGCGGCACCGCGCGGCACTCCAGCGGCCTCGCCGTGTCCGCCTTCCAGCGCCAGGTCCATGTCGTCGAGTGCGGCCCC GAGGCGCTCGCCGACGTCGCGCCCCGCATCGCCGCGCTCGGCGGAGCCGAGGACCTGATCGCCCACGTCGACGCGGTGGA GGTACGGGCCCGATGA
Upstream 100 bases:
>100_bases CCGGGTCCCGGTGCCACCGCGCCCCGCGCCGTATCACGGTGTGGTATTCCCAAAGAGTTCCACTGCTCGGACCGGCGGTC GGGCCGATACGCTCGTGGGC
Downstream 100 bases:
>100_bases CCGGGAACATCAGCGGAGCGGGTGACGGCGCCCCCTCGGGCGACAGCCCCGGCCTGGGCGACAGCCCCGGCCTGGGTGAC GGCGCCGGCCTGGGTGACGG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MLRRLDLRSAQPTMSDVRRLFPRAAVDVDVAMDAVRPVCDDVRDRGDAAVLDAAERFDRVRPAELRVPADALASALAALG PAVRDALTEAIRRARLVHRAQLREPVVVEVAPGTKVTERWIPVGRVGLYVPGGRVAYPSSVVMNVVPAQEAGVASLAVTS PPQVDNGGLPHPVVLAACALLGVDEVYAAGGAQAVAMFAHGTESCPAVDVVTGPGNVYVTAAKRLLRGLVGVDAEAGPTE VAILADGSARPDFVAADLIAQAEHDPMAACLLVTTSPELADAVDVELDKQVPATRHRERVTEALAGQGAVAIVADVDAGL AVVDAWAAEHLEIHTADAAGVAARVRNAGAIFVGAYAPVPLGDYLAGSNHVLPTGGTARHSSGLAVSAFQRQVHVVECGP EALADVAPRIAALGGAEDLIAHVDAVEVRAR
Sequences:
>Translated_431_residues MLRRLDLRSAQPTMSDVRRLFPRAAVDVDVAMDAVRPVCDDVRDRGDAAVLDAAERFDRVRPAELRVPADALASALAALG PAVRDALTEAIRRARLVHRAQLREPVVVEVAPGTKVTERWIPVGRVGLYVPGGRVAYPSSVVMNVVPAQEAGVASLAVTS PPQVDNGGLPHPVVLAACALLGVDEVYAAGGAQAVAMFAHGTESCPAVDVVTGPGNVYVTAAKRLLRGLVGVDAEAGPTE VAILADGSARPDFVAADLIAQAEHDPMAACLLVTTSPELADAVDVELDKQVPATRHRERVTEALAGQGAVAIVADVDAGL AVVDAWAAEHLEIHTADAAGVAARVRNAGAIFVGAYAPVPLGDYLAGSNHVLPTGGTARHSSGLAVSAFQRQVHVVECGP EALADVAPRIAALGGAEDLIAHVDAVEVRAR >Mature_431_residues MLRRLDLRSAQPTMSDVRRLFPRAAVDVDVAMDAVRPVCDDVRDRGDAAVLDAAERFDRVRPAELRVPADALASALAALG PAVRDALTEAIRRARLVHRAQLREPVVVEVAPGTKVTERWIPVGRVGLYVPGGRVAYPSSVVMNVVPAQEAGVASLAVTS PPQVDNGGLPHPVVLAACALLGVDEVYAAGGAQAVAMFAHGTESCPAVDVVTGPGNVYVTAAKRLLRGLVGVDAEAGPTE VAILADGSARPDFVAADLIAQAEHDPMAACLLVTTSPELADAVDVELDKQVPATRHRERVTEALAGQGAVAIVADVDAGL AVVDAWAAEHLEIHTADAAGVAARVRNAGAIFVGAYAPVPLGDYLAGSNHVLPTGGTARHSSGLAVSAFQRQVHVVECGP EALADVAPRIAALGGAEDLIAHVDAVEVRAR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=421, Percent_Identity=35.3919239904988, Blast_Score=250, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6319819, Length=409, Percent_Identity=35.6968215158924, Blast_Score=239, Evalue=5e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 44477; Mature: 44477
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRLDLRSAQPTMSDVRRLFPRAAVDVDVAMDAVRPVCDDVRDRGDAAVLDAAERFDRV CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC RPAELRVPADALASALAALGPAVRDALTEAIRRARLVHRAQLREPVVVEVAPGTKVTERW CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHC IPVGRVGLYVPGGRVAYPSSVVMNVVPAQEAGVASLAVTSPPQVDNGGLPHPVVLAACAL CCCCCEEEEECCCCEECCCHHHEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH LGVDEVYAAGGAQAVAMFAHGTESCPAVDVVTGPGNVYVTAAKRLLRGLVGVDAEAGPTE HCHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCE VAILADGSARPDFVAADLIAQAEHDPMAACLLVTTSPELADAVDVELDKQVPATRHRERV EEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCEECCCCCCHHHHHHH TEALAGQGAVAIVADVDAGLAVVDAWAAEHLEIHTADAAGVAARVRNAGAIFVGAYAPVP HHHHCCCCCEEEEEECCCCHHHHHHHHHHCEEEEECCHHHHHHHHCCCCEEEEECCCCCC LGDYLAGSNHVLPTGGTARHSSGLAVSAFQRQVHVVECGPEALADVAPRIAALGGAEDLI CHHHHCCCCEEECCCCCCCCCCCCEEEEHHCEEEEEECCHHHHHHHHHHHHHCCCHHHHH AHVDAVEVRAR HHHHHEEEECC >Mature Secondary Structure MLRRLDLRSAQPTMSDVRRLFPRAAVDVDVAMDAVRPVCDDVRDRGDAAVLDAAERFDRV CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC RPAELRVPADALASALAALGPAVRDALTEAIRRARLVHRAQLREPVVVEVAPGTKVTERW CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHC IPVGRVGLYVPGGRVAYPSSVVMNVVPAQEAGVASLAVTSPPQVDNGGLPHPVVLAACAL CCCCCEEEEECCCCEECCCHHHEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH LGVDEVYAAGGAQAVAMFAHGTESCPAVDVVTGPGNVYVTAAKRLLRGLVGVDAEAGPTE HCHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCE VAILADGSARPDFVAADLIAQAEHDPMAACLLVTTSPELADAVDVELDKQVPATRHRERV EEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCEECCCCCCHHHHHHH TEALAGQGAVAIVADVDAGLAVVDAWAAEHLEIHTADAAGVAARVRNAGAIFVGAYAPVP HHHHCCCCCEEEEEECCCCHHHHHHHHHHCEEEEECCHHHHHHHHCCCCEEEEECCCCCC LGDYLAGSNHVLPTGGTARHSSGLAVSAFQRQVHVVECGPEALADVAPRIAALGGAEDLI CHHHHCCCCEEECCCCCCCCCCCCEEEEHHCEEEEEECCHHHHHHHHHHHHHCCCHHHHH AHVDAVEVRAR HHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA