| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is gmk [H]
Identifier: 158313549
GI number: 158313549
Start: 2048222
End: 2048800
Strand: Direct
Name: gmk [H]
Synonym: Franean1_1713
Alternate gene names: 158313549
Gene position: 2048222-2048800 (Clockwise)
Preceding gene: 158313548
Following gene: 158313550
Centisome position: 22.8
GC content: 73.23
Gene sequence:
>579_bases ATGGGACTGACCGTGTTGTCGGGGCCGTCCGGAGTGGGGAAGGGCACGGTCGTCGCCGCCGTCCGCCGGCTGCACCCCGA GGTGTGGGTGTCGGTGAGCGTGACGACGCGAGCGCCGCGGCCGGGCGAGACGGACGGCGTCGAGTACCACTTCGCCGACG CGGAGGAGTTCGCCCACATGGTCAAGGTGGGGGAGTTCGTCGAGCACGCGATGTTCGCGGGGCACGCCTACGGCACTCCT CGGGGACCGCTCGAGGAGCGGCTGGCACAGGGCGTTCCCTGCCTGCTGGAGATCGAGCTGCAGGGCGCCCGGCAGGTCCG GTCGGCAATGCCGGGCGCCCGGTTCGTCTTCCTGGCCCCGCCCACCTGGGACGAGCTCGTCCGTCGCCTGACCGGTCGGG GCACGGAGGCGCCTGATGTGATCCGCCGGCGCCTCGACCGGGCCCGCATCGAGCTGGCGGCCGAGACGGAGTTCGACGAG GTCGTCGTGAACGACGAGGTCACGGCCGCCGCCGCGAAGCTGGTGGGGCTGATGACCGGTCGCCCGCGGGACGCGCACCG CGCTGCGGACGTCCCGTGA
Upstream 100 bases:
>100_bases ACGGCGGGCGCCGGGGGGCGCCGGGCCGGCCGTCGCCGGCGTGGCCCGCCCGCCCCGCCTGAACCTGCGTGACCCCGTGG AGGGGCTCTAAGGTGTCGGG
Downstream 100 bases:
>100_bases CCGGCGGCTCGGCGCTCCACCTCCCGGGGACGCGTGATCTTCGGGGCACCCACGGCCCGGCGGCGAACGGCTCGGTGACG GGCTGTACCGGTTGCGGCTG
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGLTVLSGPSGVGKGTVVAAVRRLHPEVWVSVSVTTRAPRPGETDGVEYHFADAEEFAHMVKVGEFVEHAMFAGHAYGTP RGPLEERLAQGVPCLLEIELQGARQVRSAMPGARFVFLAPPTWDELVRRLTGRGTEAPDVIRRRLDRARIELAAETEFDE VVVNDEVTAAAAKLVGLMTGRPRDAHRAADVP
Sequences:
>Translated_192_residues MGLTVLSGPSGVGKGTVVAAVRRLHPEVWVSVSVTTRAPRPGETDGVEYHFADAEEFAHMVKVGEFVEHAMFAGHAYGTP RGPLEERLAQGVPCLLEIELQGARQVRSAMPGARFVFLAPPTWDELVRRLTGRGTEAPDVIRRRLDRARIELAAETEFDE VVVNDEVTAAAAKLVGLMTGRPRDAHRAADVP >Mature_191_residues GLTVLSGPSGVGKGTVVAAVRRLHPEVWVSVSVTTRAPRPGETDGVEYHFADAEEFAHMVKVGEFVEHAMFAGHAYGTPR GPLEERLAQGVPCLLEIELQGARQVRSAMPGARFVFLAPPTWDELVRRLTGRGTEAPDVIRRRLDRARIELAAETEFDEV VVNDEVTAAAAKLVGLMTGRPRDAHRAADVP
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=187, Percent_Identity=34.7593582887701, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI4504221, Length=187, Percent_Identity=34.7593582887701, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI226874831, Length=187, Percent_Identity=34.7593582887701, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI4505237, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI262118255, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI262118263, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI262118259, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI21361598, Length=179, Percent_Identity=28.4916201117318, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI38570142, Length=177, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI14780902, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI21389483, Length=181, Percent_Identity=25.414364640884, Blast_Score=67, Evalue=7e-12, Organism=Homo sapiens, GI111154074, Length=163, Percent_Identity=26.9938650306748, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1790080, Length=178, Percent_Identity=42.1348314606742, Blast_Score=150, Evalue=4e-38, Organism=Caenorhabditis elegans, GI193203132, Length=179, Percent_Identity=39.1061452513966, Blast_Score=132, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17508835, Length=179, Percent_Identity=39.1061452513966, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6320662, Length=179, Percent_Identity=42.4581005586592, Blast_Score=146, Evalue=2e-36, Organism=Drosophila melanogaster, GI21356141, Length=187, Percent_Identity=33.1550802139037, Blast_Score=110, Evalue=4e-25, Organism=Drosophila melanogaster, GI116007136, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI85724806, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45554489, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45554481, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640542, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI161077626, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI221330162, Length=163, Percent_Identity=28.8343558282209, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI221330166, Length=163, Percent_Identity=28.8343558282209, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI221330164, Length=159, Percent_Identity=28.9308176100629, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 20827; Mature: 20696
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTVLSGPSGVGKGTVVAAVRRLHPEVWVSVSVTTRAPRPGETDGVEYHFADAEEFAHM CCCEEECCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEEEECCHHHHHHH VKVGEFVEHAMFAGHAYGTPRGPLEERLAQGVPCLLEIELQGARQVRSAMPGARFVFLAP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHCCCCEEEEECC PTWDELVRRLTGRGTEAPDVIRRRLDRARIELAAETEFDEVVVNDEVTAAAAKLVGLMTG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCC RPRDAHRAADVP CCCCCCCCCCCC >Mature Secondary Structure GLTVLSGPSGVGKGTVVAAVRRLHPEVWVSVSVTTRAPRPGETDGVEYHFADAEEFAHM CCEEECCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEEEECCHHHHHHH VKVGEFVEHAMFAGHAYGTPRGPLEERLAQGVPCLLEIELQGARQVRSAMPGARFVFLAP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHCCCCEEEEECC PTWDELVRRLTGRGTEAPDVIRRRLDRARIELAAETEFDEVVVNDEVTAAAAKLVGLMTG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCC RPRDAHRAADVP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA