| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313440
Identifier: 158313440
GI number: 158313440
Start: 1918421
End: 1919995
Strand: Direct
Name: 158313440
Synonym: Franean1_1603
Alternate gene names: NA
Gene position: 1918421-1919995 (Clockwise)
Preceding gene: 158313436
Following gene: 158313442
Centisome position: 21.36
GC content: 74.54
Gene sequence:
>1575_bases ATGGGTCTGCTCGACGCGATCACGAACATGGGTCACACACCGGCGCACGTCCGCCCGCTGACCCCGGGCGACCGCGCCTA TCTCGCCTTCGTCCGGCGCAATCCCGGTGAGCACCAGGACATCGGCGCGCTGCTGCACTTCGACGGCCCCCCGCTGGACC TGCCGGCCCTGCGGGCCCACGTGGCCGAGCGGCTGCGCGACCCGCGGGCCCGGATGCTGACCGACCGTCTCGACACAGTG CGGGTCTGGTCCCCCGAGCGGGGCGCGTCGGCCGAGGAGACCCGCTGGGTCTCCGACCCCGACATGAACCTCGACGACCA TGTCGTCGCCTTCGACCTGCCCCCCGCAGACGGGGGCGCCGCGGCGGGGCAGTCCGCCGACGCGTCCCACGACGCCCGGC TGCGGGCCGCCGTCGACGCGATCGTCGCCCGGCCGATCGACCTCACCCGGCCGCCGTGGATGCTCTACCTCCTGCGTGAC CCGACCCCGGGGGCGACTGGTACCGCGCTGGTCTACCGCTCCAGCCACGTCCAGCAGGACGGCTTCGCGCTCTACCGGGT GATGTACCTGCTGTTCGGTGAGAGCGACGAGGTCGATCTCGGGCTGGCGCCGACGATCCGCCGCCCCCGCCCGGCCGACT ACGCCCGGTTCGTCGGCCGCGGGATCTCCTGCCTGCTGCCGACCCGGCGCCTCGAGTCCTGGGGCGGCCCACCGAGCGGC CCGGCGAGACTTACCTGGGTGACCACGGAGCTCGCCACGCTGCGCGCGGTGGCCCGCCAGCACGGCGTCACCGTGAACGA CGTCTACCTGGCGGCGCTCGCCGGGGCGCTGCGCGCCTGGTCGCTGCCGGAGTGGGAGCGCAGCGGCCGTCAGCTGCACG CGCTGATGCCCGTCAGCATCCGCTCCGCGGCCGAACAGGACGTCCTGTCGAACCACAGCACCGGGGCGCGCGTCCCGCTG TTCTGCGGTGAGCCCGACCCGGCCCGGCGGGTGGCCATGATCGCGGCGGAGACCCGCCGGATGAAGCAGGGCGGGCTGGG CCTGGTGGAGCGCCAGCACTTCCCGCTCATGGCGGCGAAGGCCTCCCAACGCATGCTCGCGAACGTCGGCAGCTATCCGG CCCAGATCAACAAGATGGCGCTGGTGGCGACCAACGCCCGGTCGATCCGCGGCCCGCTCTCCATCGCCGGCCGCCGGATG ACCGGGCTGATCGGCATGGGCCCGCTGCTCGTCGGACGTCAGCACCTGGCCGTGGCGATGTTCGGCGTGGACGACCGGGT CGGGGTCACGTTCGTGGCCAGCGAGAGCGTCCCGGACCACGCCCGGCTTGCCGACCTGTGGCTGGCCGAGCTGGCCGCGC TGGGCCGGTCCGACTCGCCCGTCGGGGTGAGCGTGCCGACCCAGCGCCTGTCCTCGGCATCGGCCGCGGTGACGGCCGTC ATGGCCGGCGCGGGGCCCGGCGCTGTCTCGGGTGCCGTCTCAGGTGCGGTGACCGGTGCCGTCCGGACCGAGGTCGGCGC CCTCATCCGCCCCTGGCGCCGCCGCCCCACCACCCCGGCAGCCCCCGCCATGTAA
Upstream 100 bases:
>100_bases TAGGTATCTCTCGCGCACAGTTGCGCCGATCCGCCAGGACCGTTGATCAGTTGGTTTCGGCCTGTACCCAACGCCCGCGG ACGGGTTGGGGAAGCGTCTG
Downstream 100 bases:
>100_bases CTGTCACGTGACCTGTCGGAACCGGCCCCGCGTCGGGCCCAGTGAAGCGTGGCGGGTGAGTGAGTCCATGGACTCACTCA CCCGCCACGCACCTTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Putative triacylglycerol synthase Rv1425/MT1468 [H]
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MGLLDAITNMGHTPAHVRPLTPGDRAYLAFVRRNPGEHQDIGALLHFDGPPLDLPALRAHVAERLRDPRARMLTDRLDTV RVWSPERGASAEETRWVSDPDMNLDDHVVAFDLPPADGGAAAGQSADASHDARLRAAVDAIVARPIDLTRPPWMLYLLRD PTPGATGTALVYRSSHVQQDGFALYRVMYLLFGESDEVDLGLAPTIRRPRPADYARFVGRGISCLLPTRRLESWGGPPSG PARLTWVTTELATLRAVARQHGVTVNDVYLAALAGALRAWSLPEWERSGRQLHALMPVSIRSAAEQDVLSNHSTGARVPL FCGEPDPARRVAMIAAETRRMKQGGLGLVERQHFPLMAAKASQRMLANVGSYPAQINKMALVATNARSIRGPLSIAGRRM TGLIGMGPLLVGRQHLAVAMFGVDDRVGVTFVASESVPDHARLADLWLAELAALGRSDSPVGVSVPTQRLSSASAAVTAV MAGAGPGAVSGAVSGAVTGAVRTEVGALIRPWRRRPTTPAAPAM
Sequences:
>Translated_524_residues MGLLDAITNMGHTPAHVRPLTPGDRAYLAFVRRNPGEHQDIGALLHFDGPPLDLPALRAHVAERLRDPRARMLTDRLDTV RVWSPERGASAEETRWVSDPDMNLDDHVVAFDLPPADGGAAAGQSADASHDARLRAAVDAIVARPIDLTRPPWMLYLLRD PTPGATGTALVYRSSHVQQDGFALYRVMYLLFGESDEVDLGLAPTIRRPRPADYARFVGRGISCLLPTRRLESWGGPPSG PARLTWVTTELATLRAVARQHGVTVNDVYLAALAGALRAWSLPEWERSGRQLHALMPVSIRSAAEQDVLSNHSTGARVPL FCGEPDPARRVAMIAAETRRMKQGGLGLVERQHFPLMAAKASQRMLANVGSYPAQINKMALVATNARSIRGPLSIAGRRM TGLIGMGPLLVGRQHLAVAMFGVDDRVGVTFVASESVPDHARLADLWLAELAALGRSDSPVGVSVPTQRLSSASAAVTAV MAGAGPGAVSGAVSGAVTGAVRTEVGALIRPWRRRPTTPAAPAM >Mature_523_residues GLLDAITNMGHTPAHVRPLTPGDRAYLAFVRRNPGEHQDIGALLHFDGPPLDLPALRAHVAERLRDPRARMLTDRLDTVR VWSPERGASAEETRWVSDPDMNLDDHVVAFDLPPADGGAAAGQSADASHDARLRAAVDAIVARPIDLTRPPWMLYLLRDP TPGATGTALVYRSSHVQQDGFALYRVMYLLFGESDEVDLGLAPTIRRPRPADYARFVGRGISCLLPTRRLESWGGPPSGP ARLTWVTTELATLRAVARQHGVTVNDVYLAALAGALRAWSLPEWERSGRQLHALMPVSIRSAAEQDVLSNHSTGARVPLF CGEPDPARRVAMIAAETRRMKQGGLGLVERQHFPLMAAKASQRMLANVGSYPAQINKMALVATNARSIRGPLSIAGRRMT GLIGMGPLLVGRQHLAVAMFGVDDRVGVTFVASESVPDHARLADLWLAELAALGRSDSPVGVSVPTQRLSSASAAVTAVM AGAGPGAVSGAVSGAVTGAVRTEVGALIRPWRRRPTTPAAPAM
Specific function: Upon expression in E.coli functions very weakly as a triacylglycerol synthase, making triacylglycerol (TG) from diolein and long-chain fatty acyl-CoA. Has no wax synthase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the long-chain O-acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014292 - InterPro: IPR004255 [H]
Pfam domain/function: PF03007 UPF0089 [H]
EC number: =2.3.1.20 [H]
Molecular weight: Translated: 56053; Mature: 55922
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLDAITNMGHTPAHVRPLTPGDRAYLAFVRRNPGEHQDIGALLHFDGPPLDLPALRAH CCHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHH VAERLRDPRARMLTDRLDTVRVWSPERGASAEETRWVSDPDMNLDDHVVAFDLPPADGGA HHHHHCCCHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCC AAGQSADASHDARLRAAVDAIVARPIDLTRPPWMLYLLRDPTPGATGTALVYRSSHVQQD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCC GFALYRVMYLLFGESDEVDLGLAPTIRRPRPADYARFVGRGISCLLPTRRLESWGGPPSG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHCCCCCCC PARLTWVTTELATLRAVARQHGVTVNDVYLAALAGALRAWSLPEWERSGRQLHALMPVSI CCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCHHH RSAAEQDVLSNHSTGARVPLFCGEPDPARRVAMIAAETRRMKQGGLGLVERQHFPLMAAK HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHH ASQRMLANVGSYPAQINKMALVATNARSIRGPLSIAGRRMTGLIGMGPLLVGRQHLAVAM HHHHHHHHCCCCCHHHCCEEEEEECCHHHCCCHHHCCCHHHHHHCCCHHHHCCCEEEEEE FGVDDRVGVTFVASESVPDHARLADLWLAELAALGRSDSPVGVSVPTQRLSSASAAVTAV ECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH MAGAGPGAVSGAVSGAVTGAVRTEVGALIRPWRRRPTTPAAPAM EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GLLDAITNMGHTPAHVRPLTPGDRAYLAFVRRNPGEHQDIGALLHFDGPPLDLPALRAH CHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHH VAERLRDPRARMLTDRLDTVRVWSPERGASAEETRWVSDPDMNLDDHVVAFDLPPADGGA HHHHHCCCHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCC AAGQSADASHDARLRAAVDAIVARPIDLTRPPWMLYLLRDPTPGATGTALVYRSSHVQQD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCC GFALYRVMYLLFGESDEVDLGLAPTIRRPRPADYARFVGRGISCLLPTRRLESWGGPPSG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHCCCCCCC PARLTWVTTELATLRAVARQHGVTVNDVYLAALAGALRAWSLPEWERSGRQLHALMPVSI CCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCHHH RSAAEQDVLSNHSTGARVPLFCGEPDPARRVAMIAAETRRMKQGGLGLVERQHFPLMAAK HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHH ASQRMLANVGSYPAQINKMALVATNARSIRGPLSIAGRRMTGLIGMGPLLVGRQHLAVAM HHHHHHHHCCCCCHHHCCEEEEEECCHHHCCCHHHCCCHHHHHHCCCHHHHCCCEEEEEE FGVDDRVGVTFVASESVPDHARLADLWLAELAALGRSDSPVGVSVPTQRLSSASAAVTAV ECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH MAGAGPGAVSGAVSGAVTGAVRTEVGALIRPWRRRPTTPAAPAM EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]