Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313261

Identifier: 158313261

GI number: 158313261

Start: 1714824

End: 1715570

Strand: Direct

Name: 158313261

Synonym: Franean1_1420

Alternate gene names: NA

Gene position: 1714824-1715570 (Clockwise)

Preceding gene: 158313259

Following gene: 158313262

Centisome position: 19.09

GC content: 72.29

Gene sequence:

>747_bases
GTGTCCGATGATCCGCCCGCACCGTCGGTGCCGTCGTATGACGAGCTCGCGGCGCTGGTGGTGGAACAGGCGGCCCTGAT
CGCGCAGTTGCGGGCCGAGTTGGAACAGGCCCGGGCGCGGATAGCCGAGTTGGAGGCCCAGGTCGCCAAGACGTCGCGGA
ACTCGGCGAAGCCACCGAGTTCGGACGGGCTGGCCAAGCCACCCCCGAAGTCGCTGCGGAAGAAGACCGGCCGGCGGCCC
GGTGGGCAGAACGGCCATCCCGGATCGACGCTACGCATGGTCGCCGATCCCGATGTGCGGCTGGCGCACGAGCCGGGGCC
GTGCTCGGGGTGCGGGACGTCGCTGTCGGGCCGGCCCGTTACCCGGACCGAACGCCGGCAGGTCTTCGACCTGCCCGACC
TACGCCCGCACGTGACCGAACATCAGCTCCTCGAACGGGAATGCGGCTGCGGGACACGCACGAAGGCCACCGCACCGGCC
GGGGTGGACGCCCCGGTGCAGTACGGGCCGCGGGTGACCGCGGCGGCGGTCTACCTGTATTCCGGCCAGTTCTTGTCGAA
GGACCGGACCGCGACCGCGCTCGCCGAGCTGGTCGGGATCCCCCTGTCCGCGGGCACGGTCGCGGCGATGGCCGCCCGCG
CCGCCGCCGACCTGGAGGGTTTCCTCACCACCATCCGCGAGCACCTCGCCGCCGCCGAGGTGATCGGCGCGGACGAGACC
GGGCTACGGGTCGCCGGCAGATTATAG

Upstream 100 bases:

>100_bases
ATCGTTTGTTTTTGGTTTCGCGGCGGGTTGGGGCTCCTCGATGACCCGGCGACCCGGGAGTGTTGGCGCCGCGTGGTTGA
TCAGACCGTAGGGTCCGGGT

Downstream 100 bases:

>100_bases
GTTCGAGTCCTATCGCGGGAGCACGTTCGCCCAGGTCAGGGGCCATGTTAGCGAGATTCCAAAGATCTTGAAGTGAAGAT
CACCCCAACTTTACCCCCAT

Product: transposase

Products: NA

Alternate protein names: Transposase IS; Transposase Is; Archae-Like Transposase; Transposase Of

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSDDPPAPSVPSYDELAALVVEQAALIAQLRAELEQARARIAELEAQVAKTSRNSAKPPSSDGLAKPPPKSLRKKTGRRP
GGQNGHPGSTLRMVADPDVRLAHEPGPCSGCGTSLSGRPVTRTERRQVFDLPDLRPHVTEHQLLERECGCGTRTKATAPA
GVDAPVQYGPRVTAAAVYLYSGQFLSKDRTATALAELVGIPLSAGTVAAMAARAAADLEGFLTTIREHLAAAEVIGADET
GLRVAGRL

Sequences:

>Translated_248_residues
MSDDPPAPSVPSYDELAALVVEQAALIAQLRAELEQARARIAELEAQVAKTSRNSAKPPSSDGLAKPPPKSLRKKTGRRP
GGQNGHPGSTLRMVADPDVRLAHEPGPCSGCGTSLSGRPVTRTERRQVFDLPDLRPHVTEHQLLERECGCGTRTKATAPA
GVDAPVQYGPRVTAAAVYLYSGQFLSKDRTATALAELVGIPLSAGTVAAMAARAAADLEGFLTTIREHLAAAEVIGADET
GLRVAGRL
>Mature_247_residues
SDDPPAPSVPSYDELAALVVEQAALIAQLRAELEQARARIAELEAQVAKTSRNSAKPPSSDGLAKPPPKSLRKKTGRRPG
GQNGHPGSTLRMVADPDVRLAHEPGPCSGCGTSLSGRPVTRTERRQVFDLPDLRPHVTEHQLLERECGCGTRTKATAPAG
VDAPVQYGPRVTAAAVYLYSGQFLSKDRTATALAELVGIPLSAGTVAAMAARAAADLEGFLTTIREHLAAAEVIGADETG
LRVAGRL

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26009; Mature: 25878

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDPPAPSVPSYDELAALVVEQAALIAQLRAELEQARARIAELEAQVAKTSRNSAKPPS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SDGLAKPPPKSLRKKTGRRPGGQNGHPGSTLRMVADPDVRLAHEPGPCSGCGTSLSGRPV
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCC
TRTERRQVFDLPDLRPHVTEHQLLERECGCGTRTKATAPAGVDAPVQYGPRVTAAAVYLY
CHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SGQFLSKDRTATALAELVGIPLSAGTVAAMAARAAADLEGFLTTIREHLAAAEVIGADET
CCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLRVAGRL
CCEECCCC
>Mature Secondary Structure 
SDDPPAPSVPSYDELAALVVEQAALIAQLRAELEQARARIAELEAQVAKTSRNSAKPPS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SDGLAKPPPKSLRKKTGRRPGGQNGHPGSTLRMVADPDVRLAHEPGPCSGCGTSLSGRPV
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCC
TRTERRQVFDLPDLRPHVTEHQLLERECGCGTRTKATAPAGVDAPVQYGPRVTAAAVYLY
CHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SGQFLSKDRTATALAELVGIPLSAGTVAAMAARAAADLEGFLTTIREHLAAAEVIGADET
CCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLRVAGRL
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA