Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313259

Identifier: 158313259

GI number: 158313259

Start: 1713496

End: 1714125

Strand: Direct

Name: 158313259

Synonym: Franean1_1418

Alternate gene names: NA

Gene position: 1713496-1714125 (Clockwise)

Preceding gene: 158313257

Following gene: 158313261

Centisome position: 19.08

GC content: 61.59

Gene sequence:

>630_bases
ATGCGCAGCAACTTCGACGTCAAGAAGGAACGTCCCAGGCTCTATTCGTCGAAGCGAGACAAGTTCGAGATCGTCGACGT
CGCGCGGGCGCATTTCCTCATGGCGGACGGCCATGGCGATCCCAACACCTCACCGGAGTACGTGAGGGTGGTCACCGCGC
TCTACACGACCTCCTACGCCGTGCGTGCCGTGGCCAAGGACGAGTTGAAGCGGACGCACACCGTTGCTCCGCTTGAGGGC
CTGTGGTCCGCGAAGGACCTGCAGGTCTTCCATACTCGAGACAAGGGCAGCTGGGACTGGACCCTCATGATCTTCCAGCC
CGACTGGATCACCTCGGAGATCGTTGATGCGGCGCTGGAACGGGTCCACGAGAAGAAGAAGGACCTTGACGCAGTGAAGA
AGGTCCGGTTCGAGGAGTTTCTCGAGGGCACGTGCGTTCAGACTCTCTACGTAGGACCGTATGACAAAGAGGGCCCCACC
ATCTCCCGGATGCACGACGAGTTCATGCCGGCCGAAGGTCTCGCCCCTCGGGGGCGTCACCATGAAATCTATCTATCAGA
TGCCCGCCGGACGGACCCGAGCCGGCTGCGCACGATTATCCGGCAGCCGGTTGGTGCCGCTCGAGAGTAG

Upstream 100 bases:

>100_bases
AGTCTGCTGCGACACATCCACCCGACAGTCTACGACGCCTGACTACAGCACTAGGATTGAGGACAGCGAAACCGCTCGAT
GCGTGGGAAGGAACTCACTG

Downstream 100 bases:

>100_bases
GGGCATCGCTGGCCTCCCGGGAGGGCCAGACGTTGAACCTCCCACGCGCGCCGGGAGTTCTCCTTCTCCTTCGCTACGAT
CACCACAAGATAACCCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRSNFDVKKERPRLYSSKRDKFEIVDVARAHFLMADGHGDPNTSPEYVRVVTALYTTSYAVRAVAKDELKRTHTVAPLEG
LWSAKDLQVFHTRDKGSWDWTLMIFQPDWITSEIVDAALERVHEKKKDLDAVKKVRFEEFLEGTCVQTLYVGPYDKEGPT
ISRMHDEFMPAEGLAPRGRHHEIYLSDARRTDPSRLRTIIRQPVGAARE

Sequences:

>Translated_209_residues
MRSNFDVKKERPRLYSSKRDKFEIVDVARAHFLMADGHGDPNTSPEYVRVVTALYTTSYAVRAVAKDELKRTHTVAPLEG
LWSAKDLQVFHTRDKGSWDWTLMIFQPDWITSEIVDAALERVHEKKKDLDAVKKVRFEEFLEGTCVQTLYVGPYDKEGPT
ISRMHDEFMPAEGLAPRGRHHEIYLSDARRTDPSRLRTIIRQPVGAARE
>Mature_209_residues
MRSNFDVKKERPRLYSSKRDKFEIVDVARAHFLMADGHGDPNTSPEYVRVVTALYTTSYAVRAVAKDELKRTHTVAPLEG
LWSAKDLQVFHTRDKGSWDWTLMIFQPDWITSEIVDAALERVHEKKKDLDAVKKVRFEEFLEGTCVQTLYVGPYDKEGPT
ISRMHDEFMPAEGLAPRGRHHEIYLSDARRTDPSRLRTIIRQPVGAARE

Specific function: Unknown

COG id: COG4832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24129; Mature: 24129

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSNFDVKKERPRLYSSKRDKFEIVDVARAHFLMADGHGDPNTSPEYVRVVTALYTTSYA
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHH
VRAVAKDELKRTHTVAPLEGLWSAKDLQVFHTRDKGSWDWTLMIFQPDWITSEIVDAALE
HHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHH
RVHEKKKDLDAVKKVRFEEFLEGTCVQTLYVGPYDKEGPTISRMHDEFMPAEGLAPRGRH
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC
HEIYLSDARRTDPSRLRTIIRQPVGAARE
CEEEECCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRSNFDVKKERPRLYSSKRDKFEIVDVARAHFLMADGHGDPNTSPEYVRVVTALYTTSYA
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHH
VRAVAKDELKRTHTVAPLEGLWSAKDLQVFHTRDKGSWDWTLMIFQPDWITSEIVDAALE
HHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHH
RVHEKKKDLDAVKKVRFEEFLEGTCVQTLYVGPYDKEGPTISRMHDEFMPAEGLAPRGRH
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC
HEIYLSDARRTDPSRLRTIIRQPVGAARE
CEEEECCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA