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The map label for this gene is etfB [H]

Identifier: 158312928

GI number: 158312928

Start: 1271427

End: 1272269

Strand: Direct

Name: etfB [H]

Synonym: Franean1_1074

Alternate gene names: 158312928

Gene position: 1271427-1272269 (Clockwise)

Preceding gene: 158312925

Following gene: 158312929

Centisome position: 14.16

GC content: 67.97

Gene sequence:

>843_bases
ATGCGACGATGCGTGGAGGACCGACATCGATATTGCTGGCTACGGAGGCCCCAAGGCGTGAACATCGTGGTTACCGTCAA
GCAGGTTCCCGATACCTGGGCGGAGAAGAAGCTCGACGCCTCGGACAAGACGGTCGACCGTAAGAGCGTCGACAACGTCA
TGAACGAGATGGACGAGTACGGGGTCGAAGAGGCCCTGAAGATCAAGGAAGCCCATGGCGGCGAGGTGACGGTCGTCACG
ATGGGGCCGGAGAAGGCCGTCGAGACGATCCGCAAGGCTCTCTCGATGGGCGCCGACAAGGCGGTGCACCTGACCGACGA
GTCGCTGCACGGCTCCGACGCCCTCGCCACCTCCGCCGCGCTGGCGAAGGTGATCTCCACGCTCTCGCCGGACCTGATCA
TCACCTCCTCGGAGGCCTCCGACGCCCGGGGCGGCGTCATGGGCGCCCTCCTCGCGGAGCGTCTCGGTCTGCCGCAGCTC
ACGCAGGCCCGCAAGGTCACGGTCGACCCGGGCGCGAACAAGGTCTCCGTCGAGCGCCTCGCCGACAACGGCTACGCGCT
CGTCGAGGCGACCCTGCCGGCCGTCGTGGGCGTGGTCGAGAAGATCAACCAGCCGCGTTACCCCTCGTTCAAGGGCATCA
TGGCGGCCAAGAAGAAGCCCCTGACCAAGCTCTCGGCCGCCGACGCCGGTCTCGACGCGGGCTCGGTTGGCCTCGCCGGG
GCGACGTCCACGGTTGTCGACGCGCAGCCGGCACCGCCGCGCCAGAGCGGCACCATCGTCAAGGACGAGGGCGACGGCGG
CGCGAAGGTCGCTGCGTTCCTCGCGGCCCAGAAGCTCATCTGA

Upstream 100 bases:

>100_bases
ATGTCTCCCGGATGTCCGTCGCCGCCGGGCTGACATGCCCGGAGCGGGCGGATTGCGGCCTGCATCACGGCGCCGATCAT
CGGGCATGTCAGGGCGTCAG

Downstream 100 bases:

>100_bases
GGGGTTGTTGTTCGATGGCTGAAGTTCTTGTACTCGTCGAGCACAGCGATGGCGAGCCGAAGAAGGTCACGGCCGAGCTG
CTGACGCTGGCCCGCACGAT

Product: electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRRCVEDRHRYCWLRRPQGVNIVVTVKQVPDTWAEKKLDASDKTVDRKSVDNVMNEMDEYGVEEALKIKEAHGGEVTVVT
MGPEKAVETIRKALSMGADKAVHLTDESLHGSDALATSAALAKVISTLSPDLIITSSEASDARGGVMGALLAERLGLPQL
TQARKVTVDPGANKVSVERLADNGYALVEATLPAVVGVVEKINQPRYPSFKGIMAAKKKPLTKLSAADAGLDAGSVGLAG
ATSTVVDAQPAPPRQSGTIVKDEGDGGAKVAAFLAAQKLI

Sequences:

>Translated_280_residues
MRRCVEDRHRYCWLRRPQGVNIVVTVKQVPDTWAEKKLDASDKTVDRKSVDNVMNEMDEYGVEEALKIKEAHGGEVTVVT
MGPEKAVETIRKALSMGADKAVHLTDESLHGSDALATSAALAKVISTLSPDLIITSSEASDARGGVMGALLAERLGLPQL
TQARKVTVDPGANKVSVERLADNGYALVEATLPAVVGVVEKINQPRYPSFKGIMAAKKKPLTKLSAADAGLDAGSVGLAG
ATSTVVDAQPAPPRQSGTIVKDEGDGGAKVAAFLAAQKLI
>Mature_280_residues
MRRCVEDRHRYCWLRRPQGVNIVVTVKQVPDTWAEKKLDASDKTVDRKSVDNVMNEMDEYGVEEALKIKEAHGGEVTVVT
MGPEKAVETIRKALSMGADKAVHLTDESLHGSDALATSAALAKVISTLSPDLIITSSEASDARGGVMGALLAERLGLPQL
TQARKVTVDPGANKVSVERLADNGYALVEATLPAVVGVVEKINQPRYPSFKGIMAAKKKPLTKLSAADAGLDAGSVGLAG
ATSTVVDAQPAPPRQSGTIVKDEGDGGAKVAAFLAAQKLI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=254, Percent_Identity=32.2834645669291, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI62420877, Length=224, Percent_Identity=33.9285714285714, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI87081682, Length=258, Percent_Identity=30.2325581395349, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI2367123, Length=219, Percent_Identity=26.9406392694064, Blast_Score=68, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=246, Percent_Identity=32.9268292682927, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321646, Length=214, Percent_Identity=31.3084112149533, Blast_Score=92, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=34.9593495934959, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=34.9593495934959, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29504; Mature: 29504

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRCVEDRHRYCWLRRPQGVNIVVTVKQVPDTWAEKKLDASDKTVDRKSVDNVMNEMDEY
CCCHHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
GVEEALKIKEAHGGEVTVVTMGPEKAVETIRKALSMGADKAVHLTDESLHGSDALATSAA
CHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHH
LAKVISTLSPDLIITSSEASDARGGVMGALLAERLGLPQLTQARKVTVDPGANKVSVERL
HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEHEEH
ADNGYALVEATLPAVVGVVEKINQPRYPSFKGIMAAKKKPLTKLSAADAGLDAGSVGLAG
HCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC
ATSTVVDAQPAPPRQSGTIVKDEGDGGAKVAAFLAAQKLI
CCCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRCVEDRHRYCWLRRPQGVNIVVTVKQVPDTWAEKKLDASDKTVDRKSVDNVMNEMDEY
CCCHHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
GVEEALKIKEAHGGEVTVVTMGPEKAVETIRKALSMGADKAVHLTDESLHGSDALATSAA
CHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHH
LAKVISTLSPDLIITSSEASDARGGVMGALLAERLGLPQLTQARKVTVDPGANKVSVERL
HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEHEEH
ADNGYALVEATLPAVVGVVEKINQPRYPSFKGIMAAKKKPLTKLSAADAGLDAGSVGLAG
HCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC
ATSTVVDAQPAPPRQSGTIVKDEGDGGAKVAAFLAAQKLI
CCCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]