Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312841

Identifier: 158312841

GI number: 158312841

Start: 1155756

End: 1157195

Strand: Direct

Name: 158312841

Synonym: Franean1_0987

Alternate gene names: NA

Gene position: 1155756-1157195 (Clockwise)

Preceding gene: 158312839

Following gene: 158312844

Centisome position: 12.87

GC content: 72.71

Gene sequence:

>1440_bases
GTGGCCCTGCAACCCGGACGAGGAAAGATCGAGGGCCGGCACTATCTGCCCTCCACCCCCGAGACAATCAGCTGGGGTGC
CCTCCCGACCGCGCGGACGCGGCCGGTCCTCAGCATCGACCCCGGCACGACCGTCACCATCGACACCGTCAGCCAGGAAG
GGATCCTCGAGGACCAGGGGCGGGACCCGGACACGTTCTTCCGCGGTTTCGGCGTGGCGCCGTCCGAGGTGCTCGAGGAC
GCGCGGGCGATCGCCGCGTCCGGGATACCGCACCGCTTCGGCCGCGACGGCGCGCACATCGTGACGGGCCCGGTGTACGT
CCGGGGCGCCGAACCCGGCGACGTGCTGCGGATCGACGTCATCTCACTGCACCCGCGCGCCCGCTACGGCGTGATCTCCA
CCCGGCACGGCGCCGGCCTGCTCGCCGGCGAGTTTCCCGAGACCCCGGCGCCGGACCTCGACGCCGACGCCCGGCGCTGG
CAGGCATATCGGACGGCTACGTCCTTCTGCGCGGTCGAACGCCGCCGCGGCCGGCTCTTCGGATCCATGCCGAGCGGCCG
CGACACCCGGATCCGCTTTCCGCTCAACCCGTCGCTGGGCATCATGACCGTTGCCGCGGACGTCCCCGACGGCCCGGTCT
CCTCCAATTCGGTAGGCCGGCACGGTGGCGCGCTGGACTGCCGTGATCTCGGCCCGGGCTCACATCTCTACCTGCCGATC
CAGGCGCCGGGCGCGCTTTTCGCCGTCGGCGACCCCCATTACGCCATCGGCGACGGCATGATCGGCGCGACCGCTCTGGA
AGGTCCGCTGCGAGCCACCCTCCGCCTGGTGACCCTGCGGGACGCGGCGGCCCGGGCCGCCCTCGGCGCGCTGCGGGAGC
CGTTCATCGAGACCGACGAGCTGTGGATAACGTCGGGATTCGACCCTGATCCACGGGAGGCCCTGCGCCGGGCGGCGCGT
GCGGCGGTGATGTTCCTCCAGACGAAGGTCGGGCTGGAACGGGCGGCCGCGCTCGCCTACCTGTCCTCGGCGGCGGACTT
CGGGGTCGGCCGGCTGGCGGGCGGCCCGGAATCGGGGTACTGCCGAATCCGGCGCGCGGACTTCAGCGAGCCGATGCCGG
TGAAGGCCCGGCTGCCCCGAGCCGGTTTCGCCCGCATCGTCGGCGGCACGGACGGCGACACCGACCGGGACCATGACACC
GACCGGGACCATGACACCGACCGCGACGCCGGCCTCGGCGGTGATGGTGACCCTGGGGTCGGCAGCGACCGCGGTGGTGC
CGGCCGTGGTCATGGCAGCGACGGTGACCACGGCGCTCACCACGGCCACGGGGATGACCAGGATGTCGGCCGTGACGAGG
CTCGCGTCCCTGAGCAGGATCGTGTTCCTGACCGGGACCGTTCCCCTGAGCCGGACCGTTCCCGTGAGCCGGACCGGTAA

Upstream 100 bases:

>100_bases
TCCGCTGTCCCGTCCGCCGGTGCGCCCTCCGATCCGGAGCGCCGAGCGACGACCAGGACGATTCCGGCCTACGCCGGTCG
CCGGCACGGGTAGAACGCGA

Downstream 100 bases:

>100_bases
CCACGAGCGGGACCGCGGGCTGAAGCGGTGCGGTATCCCGGACGCGGCGATCGCCCGCGCGTCCTCGAGCACCTCGGACG
GCGCCACGCCGAATCCGCGG

Product: acetamidase/formamidase

Products: NA

Alternate protein names: Formamidase; Acetamidase/Formamidase Family Protein; Acetamidase; Amidase; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Acetamidase/Formamidase Family; Formamidase/Acetamidase; Transcriptional Regulatory Protein

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQGRDPDTFFRGFGVAPSEVLED
ARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDVISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRW
QAYRTATSFCAVERRRGRLFGSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI
QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDELWITSGFDPDPREALRRAAR
AAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGYCRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDT
DRDHDTDRDAGLGGDGDPGVGSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR

Sequences:

>Translated_479_residues
MALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQGRDPDTFFRGFGVAPSEVLED
ARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDVISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRW
QAYRTATSFCAVERRRGRLFGSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI
QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDELWITSGFDPDPREALRRAAR
AAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGYCRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDT
DRDHDTDRDAGLGGDGDPGVGSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR
>Mature_478_residues
ALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQGRDPDTFFRGFGVAPSEVLEDA
RAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDVISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRWQ
AYRTATSFCAVERRRGRLFGSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPIQ
APGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDELWITSGFDPDPREALRRAARA
AVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGYCRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDTD
RDHDTDRDAGLGGDGDPGVGSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR

Specific function: Unknown

COG id: COG2421

COG function: function code C; Predicted acetamidase/formamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51008; Mature: 50877

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQG
CCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCC
RDPDTFFRGFGVAPSEVLEDARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDV
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCEEEECCCCCCEEEEEE
ISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRWQAYRTATSFCAVERRRGRLF
EEECCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
GSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI
CCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEE
QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDE
ECCCEEEEECCCCEEECCCCCCHHHHCCHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCC
LWITSGFDPDPREALRRAARAAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGY
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCE
CRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDTDRDHDTDRDAGLGGDGDPGV
EEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQG
CCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCC
RDPDTFFRGFGVAPSEVLEDARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDV
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCEEEECCCCCCEEEEEE
ISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRWQAYRTATSFCAVERRRGRLF
EEECCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
GSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI
CCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEE
QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDE
ECCCEEEEECCCCEEECCCCCCHHHHCCHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCC
LWITSGFDPDPREALRRAARAAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGY
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCE
CRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDTDRDHDTDRDAGLGGDGDPGV
EEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA