Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312401

Identifier: 158312401

GI number: 158312401

Start: 630384

End: 631904

Strand: Direct

Name: 158312401

Synonym: Franean1_0544

Alternate gene names: NA

Gene position: 630384-631904 (Clockwise)

Preceding gene: 158312400

Following gene: 158312404

Centisome position: 7.02

GC content: 72.85

Gene sequence:

>1521_bases
TTGATCGGCAGCACCCGGACCACAGCTGCCGGGTCGGCCCAGAACGACCTGGTCACGCGGCATCCGCTGGGGCTCTCCCC
GAACAGCGACCGGGTCATCGCGAAGCTCTTCCTGCCCGGTGAGGAGGGCAGCCAGCCGCACTCCCGGGCCGCCGGCATCG
TGGCCCGGGCTCTCGCCCTGCCCGAGCGGGAGGTCGACAGCCTGGTCGCCGACCTCCTCGAACGGTTCGAGCCGCGCCAC
CGGGACTACCGGGGCATCCTCGCGCGGCATGCCGCGGTGGTGACTCCGCGGGTGCCGGTGCCCGCGGAGCTCTCCCCAGC
GCGCTGTCTGCTGCTCGGCGCGTGTTTCACCGCCGAGTACGCGGTGGAGGGCGCGGCCGTCACCAACCCCTCGGCGGTGC
CGCACCCCGACCAGACCGGGCTGCCGTCCGGCGCGCTGCGACTGGCGTTGAGCCTGCGCGCTGTCGGGGAGGGCCATCTG
TCCTCGATCGGCTTCGCCGTCGCGGTGATCGGTCCGGGCCCGGCGGTGCGCCTGGAGTCGCGGACCGGCCCACTCACCAC
CGGCGTCGCCGTACCCGTCGAGTGGGAGGCCGCCCGGCTGCGCGCCGTGCTCACCGAACACGGGCTCGACGACGAGGTCA
CCCGTGCCGTCCTCCAGAGCCTGGACCCACGGCGGCCCGGCAGTGAACCCGACCCCGATCTCTCCCGTGCCTTCGCCGCG
GTTCCCCCCGACCTGCTCCGTCGCCCCCAGGCACCCGGGATCCTCGCCGGGATCCGCTCGATCGCCGGATCATTGCGGCG
GGTCGAGTTCCCACCCGACAGCGCCCTGCCGCAACGGGTGCTGTGGCCCACCGTCACCAGCGAGAGCAACGGCATGGAGG
ACGCGCGGTTCGTCCGGTTCACCGCGCCGGACGGGACCGCGGACTACCGGGCCACCTACACCGCCTTCGACGGCACGGAC
ATCTCCCCGCGCCTGCTCACCAGCCCCGACCTGCGGGTCTTCACCACCGCACCGCTCACCGGCCCGGCCGCCCGTAACAA
GGGCATGGCGCTGTTCCCCCGGCTGGTCGACGGTCGCCATCTCGCGCTCTGTCGCTCCGACGGCGAGTCCACCGGTCTGA
CCGCATCGGATGACGGCCAGGTATGGGGGCCGGCGCGTCCGCTCCACGGGCCGCGGGTCGCCTTCGAACTGCTCCAGGTG
GGCAACTGCGGGTCCCCGGTCGAGACGTCCGCGGGCTGGCTCACGCTCACCCACGGCGTCGGGCCGATGCGGACGTACAC
CATCGGCGCGATCCTGCTTGATCTCGACGATCCGGGAAGGGTGGTCGCGGCGCTGCCCGAACCACTGCTCGCTCCGACCG
GGCAGGAGAGCACGGGCTATGTCCCCAACGTCGTCTACTCCTGCGGCAGCCTGATCCACCACGGTCTGCTGTGGCTGCCG
TACGGGATCGGCGACACCCGGATCGGGATGGCCAGCGTGCCCGTCGACCGGCTCCTCGCACGAATGGTTCCCGTCGGGTG
A

Upstream 100 bases:

>100_bases
GGCTCGAGCCCGGCGGCCGCAACCTCAACCAGGGCGCCGAATCGACGCTCGCCCTGCTCTCCACGACCCAGCACGCCCGC
CGCCTCCTGGCATCGACGCC

Downstream 100 bases:

>100_bases
CCAGCCCGCGGGGGCGGCGGGATCAGAGGACAGGGTCGGCGAGAACGCCCGCGTAGACGGCGAGATAGTCGGCGACCATG
CGCGCGGTGGAGAACCTCCG

Product: PH1107-like glycosidase

Products: NA

Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Glycosidase-Related; Conserved Domain Protein; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MIGSTRTTAAGSAQNDLVTRHPLGLSPNSDRVIAKLFLPGEEGSQPHSRAAGIVARALALPEREVDSLVADLLERFEPRH
RDYRGILARHAAVVTPRVPVPAELSPARCLLLGACFTAEYAVEGAAVTNPSAVPHPDQTGLPSGALRLALSLRAVGEGHL
SSIGFAVAVIGPGPAVRLESRTGPLTTGVAVPVEWEAARLRAVLTEHGLDDEVTRAVLQSLDPRRPGSEPDPDLSRAFAA
VPPDLLRRPQAPGILAGIRSIAGSLRRVEFPPDSALPQRVLWPTVTSESNGMEDARFVRFTAPDGTADYRATYTAFDGTD
ISPRLLTSPDLRVFTTAPLTGPAARNKGMALFPRLVDGRHLALCRSDGESTGLTASDDGQVWGPARPLHGPRVAFELLQV
GNCGSPVETSAGWLTLTHGVGPMRTYTIGAILLDLDDPGRVVAALPEPLLAPTGQESTGYVPNVVYSCGSLIHHGLLWLP
YGIGDTRIGMASVPVDRLLARMVPVG

Sequences:

>Translated_506_residues
MIGSTRTTAAGSAQNDLVTRHPLGLSPNSDRVIAKLFLPGEEGSQPHSRAAGIVARALALPEREVDSLVADLLERFEPRH
RDYRGILARHAAVVTPRVPVPAELSPARCLLLGACFTAEYAVEGAAVTNPSAVPHPDQTGLPSGALRLALSLRAVGEGHL
SSIGFAVAVIGPGPAVRLESRTGPLTTGVAVPVEWEAARLRAVLTEHGLDDEVTRAVLQSLDPRRPGSEPDPDLSRAFAA
VPPDLLRRPQAPGILAGIRSIAGSLRRVEFPPDSALPQRVLWPTVTSESNGMEDARFVRFTAPDGTADYRATYTAFDGTD
ISPRLLTSPDLRVFTTAPLTGPAARNKGMALFPRLVDGRHLALCRSDGESTGLTASDDGQVWGPARPLHGPRVAFELLQV
GNCGSPVETSAGWLTLTHGVGPMRTYTIGAILLDLDDPGRVVAALPEPLLAPTGQESTGYVPNVVYSCGSLIHHGLLWLP
YGIGDTRIGMASVPVDRLLARMVPVG
>Mature_506_residues
MIGSTRTTAAGSAQNDLVTRHPLGLSPNSDRVIAKLFLPGEEGSQPHSRAAGIVARALALPEREVDSLVADLLERFEPRH
RDYRGILARHAAVVTPRVPVPAELSPARCLLLGACFTAEYAVEGAAVTNPSAVPHPDQTGLPSGALRLALSLRAVGEGHL
SSIGFAVAVIGPGPAVRLESRTGPLTTGVAVPVEWEAARLRAVLTEHGLDDEVTRAVLQSLDPRRPGSEPDPDLSRAFAA
VPPDLLRRPQAPGILAGIRSIAGSLRRVEFPPDSALPQRVLWPTVTSESNGMEDARFVRFTAPDGTADYRATYTAFDGTD
ISPRLLTSPDLRVFTTAPLTGPAARNKGMALFPRLVDGRHLALCRSDGESTGLTASDDGQVWGPARPLHGPRVAFELLQV
GNCGSPVETSAGWLTLTHGVGPMRTYTIGAILLDLDDPGRVVAALPEPLLAPTGQESTGYVPNVVYSCGSLIHHGLLWLP
YGIGDTRIGMASVPVDRLLARMVPVG

Specific function: Unknown

COG id: COG2152

COG function: function code G; Predicted glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53450; Mature: 53450

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGSTRTTAAGSAQNDLVTRHPLGLSPNSDRVIAKLFLPGEEGSQPHSRAAGIVARALAL
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHC
PEREVDSLVADLLERFEPRHRDYRGILARHAAVVTPRVPVPAELSPARCLLLGACFTAEY
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCHHHEEEHHHHHHHHH
AVEGAAVTNPSAVPHPDQTGLPSGALRLALSLRAVGEGHLSSIGFAVAVIGPGPAVRLES
HCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEC
RTGPLTTGVAVPVEWEAARLRAVLTEHGLDDEVTRAVLQSLDPRRPGSEPDPDLSRAFAA
CCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
VPPDLLRRPQAPGILAGIRSIAGSLRRVEFPPDSALPQRVLWPTVTSESNGMEDARFVRF
CCHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCEECCEECCCCCCCCCCEEEEE
TAPDGTADYRATYTAFDGTDISPRLLTSPDLRVFTTAPLTGPAARNKGMALFPRLVDGRH
ECCCCCCCCEEEEEEECCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEHHHCCCCE
LALCRSDGESTGLTASDDGQVWGPARPLHGPRVAFELLQVGNCGSPVETSAGWLTLTHGV
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
GPMRTYTIGAILLDLDDPGRVVAALPEPLLAPTGQESTGYVPNVVYSCGSLIHHGLLWLP
CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
YGIGDTRIGMASVPVDRLLARMVPVG
CCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MIGSTRTTAAGSAQNDLVTRHPLGLSPNSDRVIAKLFLPGEEGSQPHSRAAGIVARALAL
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHC
PEREVDSLVADLLERFEPRHRDYRGILARHAAVVTPRVPVPAELSPARCLLLGACFTAEY
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCHHHEEEHHHHHHHHH
AVEGAAVTNPSAVPHPDQTGLPSGALRLALSLRAVGEGHLSSIGFAVAVIGPGPAVRLES
HCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEC
RTGPLTTGVAVPVEWEAARLRAVLTEHGLDDEVTRAVLQSLDPRRPGSEPDPDLSRAFAA
CCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
VPPDLLRRPQAPGILAGIRSIAGSLRRVEFPPDSALPQRVLWPTVTSESNGMEDARFVRF
CCHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCEECCEECCCCCCCCCCEEEEE
TAPDGTADYRATYTAFDGTDISPRLLTSPDLRVFTTAPLTGPAARNKGMALFPRLVDGRH
ECCCCCCCCEEEEEEECCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEHHHCCCCE
LALCRSDGESTGLTASDDGQVWGPARPLHGPRVAFELLQVGNCGSPVETSAGWLTLTHGV
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
GPMRTYTIGAILLDLDDPGRVVAALPEPLLAPTGQESTGYVPNVVYSCGSLIHHGLLWLP
CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
YGIGDTRIGMASVPVDRLLARMVPVG
CCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA