| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312400
Identifier: 158312400
GI number: 158312400
Start: 629371
End: 630387
Strand: Direct
Name: 158312400
Synonym: Franean1_0543
Alternate gene names: NA
Gene position: 629371-630387 (Clockwise)
Preceding gene: 158312399
Following gene: 158312401
Centisome position: 7.01
GC content: 74.63
Gene sequence:
>1017_bases GTGAGCTCCGCGATCTCGTTCGACCACCTGTTCCGGCTCACCGACGACATCGGACTGTTCGAGCACGCCCTCGGTTCGGT GCCACGCCGGGAGCACGGCTACTGCGTGGACGACGTCGCGCGCGGGCTGGTCGTCCTCACCCGCGAGCCATCGCCCGGGG TGGACCTGGTGCGCCTGTTGGAGCGCTACCTCGCCTTCGTGCTGGCCGCGCAGGCGGTGGACGGCGCCGTCCACAACCGG CGGGACAGCGACGGGCGGTGGCGGGACGATCCCGGCCTCGGTGACTGCTGGGGCCGGGCGCTCTGGGGGCTGGGCACCGC GGCCGCCTCCGCGCCGACCCGGCGGTTGCGGGCCTCGGCGCGGGCCGGCTTCCTCGCCAGCGCGGGGCGCCGCTCGCCCT GGCCACGGGCCATGACGTTCGCCGCGCTCGGTGCCGGAGAGGTGCTGCTCGCCCATCCGGACGACGAGCCGGCGCGCGCG CTGCTCACCGCCGCCGTCGAGGTGATCGGACCGGTCGGCGCCAACCCGGGCTGGCCGTGGCCGGAGCCCACCCTGCGCTA CGCCAACGGGGCCGTCCCGGAGGCACTGATCCTTGCCGGGATGTGCCTGCCCGACAAGGTGGTGCTCGCGGACGGTCTGC GGCTGTTGGCGTGGCTGCTCCAGGTGGAGACCCGTGACGGGAACCTGTCACCGACCCCGGTCGGCGGTCGCCGGCCGGGG GGAGATCCCGGGCCCGGTTTCGACCAGCAGCCCATCGAGGCCGCGGCGATCGCGGACGCCTGCGCCCGCGCCCACGCGGC GACCGGACGGAAAAGATGGCTGACCGGCCTCGGCCGCGCCCACGGGTGGTTCCTCGGGGACAACGACAGCTCGATGGCGT TACTCAACCCCGACACCGGCGGCTGTTACGACGGGCTCGAGCCCGGCGGCCGCAACCTCAACCAGGGCGCCGAATCGACG CTCGCCCTGCTCTCCACGACCCAGCACGCCCGCCGCCTCCTGGCATCGACGCCTTGA
Upstream 100 bases:
>100_bases TGCTGTGGCCGGCGGTCGCCGGCCGCTACCGGCGGCTGGCCGCCGGACTGGTCGCCCGCACCGGGAGCCGGCCGTCGACC GCGCCCGTGCCGGTGGCCCG
Downstream 100 bases:
>100_bases TCGGCAGCACCCGGACCACAGCTGCCGGGTCGGCCCAGAACGACCTGGTCACGCGGCATCCGCTGGGGCTCTCCCCGAAC AGCGACCGGGTCATCGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Mannosyltransferase; Glycosyltransferase Group I; Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Protein
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSSAISFDHLFRLTDDIGLFEHALGSVPRREHGYCVDDVARGLVVLTREPSPGVDLVRLLERYLAFVLAAQAVDGAVHNR RDSDGRWRDDPGLGDCWGRALWGLGTAAASAPTRRLRASARAGFLASAGRRSPWPRAMTFAALGAGEVLLAHPDDEPARA LLTAAVEVIGPVGANPGWPWPEPTLRYANGAVPEALILAGMCLPDKVVLADGLRLLAWLLQVETRDGNLSPTPVGGRRPG GDPGPGFDQQPIEAAAIADACARAHAATGRKRWLTGLGRAHGWFLGDNDSSMALLNPDTGGCYDGLEPGGRNLNQGAEST LALLSTTQHARRLLASTP
Sequences:
>Translated_338_residues MSSAISFDHLFRLTDDIGLFEHALGSVPRREHGYCVDDVARGLVVLTREPSPGVDLVRLLERYLAFVLAAQAVDGAVHNR RDSDGRWRDDPGLGDCWGRALWGLGTAAASAPTRRLRASARAGFLASAGRRSPWPRAMTFAALGAGEVLLAHPDDEPARA LLTAAVEVIGPVGANPGWPWPEPTLRYANGAVPEALILAGMCLPDKVVLADGLRLLAWLLQVETRDGNLSPTPVGGRRPG GDPGPGFDQQPIEAAAIADACARAHAATGRKRWLTGLGRAHGWFLGDNDSSMALLNPDTGGCYDGLEPGGRNLNQGAEST LALLSTTQHARRLLASTP >Mature_337_residues SSAISFDHLFRLTDDIGLFEHALGSVPRREHGYCVDDVARGLVVLTREPSPGVDLVRLLERYLAFVLAAQAVDGAVHNRR DSDGRWRDDPGLGDCWGRALWGLGTAAASAPTRRLRASARAGFLASAGRRSPWPRAMTFAALGAGEVLLAHPDDEPARAL LTAAVEVIGPVGANPGWPWPEPTLRYANGAVPEALILAGMCLPDKVVLADGLRLLAWLLQVETRDGNLSPTPVGGRRPGG DPGPGFDQQPIEAAAIADACARAHAATGRKRWLTGLGRAHGWFLGDNDSSMALLNPDTGGCYDGLEPGGRNLNQGAESTL ALLSTTQHARRLLASTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35784; Mature: 35653
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAISFDHLFRLTDDIGLFEHALGSVPRREHGYCVDDVARGLVVLTREPSPGVDLVRLL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHH ERYLAFVLAAQAVDGAVHNRRDSDGRWRDDPGLGDCWGRALWGLGTAAASAPTRRLRASA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH RAGFLASAGRRSPWPRAMTFAALGAGEVLLAHPDDEPARALLTAAVEVIGPVGANPGWPW HHCHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC PEPTLRYANGAVPEALILAGMCLPDKVVLADGLRLLAWLLQVETRDGNLSPTPVGGRRPG CCCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDPGPGFDQQPIEAAAIADACARAHAATGRKRWLTGLGRAHGWFLGDNDSSMALLNPDTG CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCEEEECCCCC GCYDGLEPGGRNLNQGAESTLALLSTTQHARRLLASTP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAISFDHLFRLTDDIGLFEHALGSVPRREHGYCVDDVARGLVVLTREPSPGVDLVRLL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHH ERYLAFVLAAQAVDGAVHNRRDSDGRWRDDPGLGDCWGRALWGLGTAAASAPTRRLRASA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH RAGFLASAGRRSPWPRAMTFAALGAGEVLLAHPDDEPARALLTAAVEVIGPVGANPGWPW HHCHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC PEPTLRYANGAVPEALILAGMCLPDKVVLADGLRLLAWLLQVETRDGNLSPTPVGGRRPG CCCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDPGPGFDQQPIEAAAIADACARAHAATGRKRWLTGLGRAHGWFLGDNDSSMALLNPDTG CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCEEEECCCCC GCYDGLEPGGRNLNQGAESTLALLSTTQHARRLLASTP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA