| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fhuA [H]
Identifier: 157964047
GI number: 157964047
Start: 5148872
End: 5151004
Strand: Reverse
Name: fhuA [H]
Synonym: Spea_4236
Alternate gene names: 157964047
Gene position: 5151004-5148872 (Counterclockwise)
Preceding gene: 157964048
Following gene: 157964046
Centisome position: 99.54
GC content: 44.49
Gene sequence:
>2133_bases ATGTCTGTCGGGACGTCATTTAAGTTTTCTCGCGTAGGGTTGGCAATCGTTGCTGCATTGGCTTCATCAACTGCTTTTGC TGAAGAAGCGACAGCAGAATCAAATGTTAAAGTTGATAGCAATATCGAGCGTATTTCCGTTACCGGACGCAGTTTTAATG ATTATAACGCTGGCTCATCTTCTGGAGCTATGCGTGGTGACATCGACATCTTAGACACCCCTCAATCAGTTACTGTTATT CCTGACTTTGTGACTGATGAGCAGTTAGCTACAAACCTTTCTGAAGTGCTAGTTAACGACTCGAGCGTAACTGGCGGCTC TGAAAAGTGGAACCGCCAAGTATTTAATATTCGTGGTTTCGAACTTTCTTCTGGCTCAGGCTTCTTAATCAATGGTCAAC AGCAGTGGTCTCACTACGTGCAGCCTATTGAAACACTACAACAAGTTGAAGTGTTAAAAGGTCCTTCTTCTATGTTATAT GGTCAGTCTGGTCCTGGCGGCTTGATCAACATGGTTACCAAGAAGCCAACCTATGAAACGATGTTGGATATTGGCTTCGA TACGGATGAGAATGGCTCGACACGTTTCCAGTTGGACGCTGGTGGTAGCTTAAACGAAGCAGAGACAATTCGTTACCGTA CAGTGCTAGTTAAGCAAGATACGACTTATTGGAGAGAGTACCAAGATGGTACTAATCAAGAGCGTGACCGCTGGTTAGGT TACCTAAACCTAGAGTTTGATATTACTGACGACTTAATGTTGTCACTTAAATATGACCATACTCAAGACAAGACGGGCAT CGACCGCGGTGGTTGGTTAGATAGCAGCGGTGACCTGATTGGTGGCCGTGACATCATCTGGGATCAGCCTTGGGCGTTTA CCGACAACACCATCTCTAATCTAGGTGCAGAGCTGACTTATCACTTGTCTGATGACTGGAAAGTGAAAGCGGGTTATAAC GATCAGCAGTTTAATCGTCAGCGTTTAGACTCTTCTCCATCACTAATTAGTGGTTCTGACGATCCATTTACCGATGGCTA CTATGTCAGCCCATTTGACCGTTATGATGACTGGCAGCATAAGACGGGCTATGTTGATTTCACTGGTAACTTCTATACTG GTGACATAGAGCATCAGCTGCTTATCGGCGCTAATATGCTGGATTATTACTATGGTCAGCTAAAAGACTCAGGTGAGAAG AAACAAGTTGTGATGCCTGGTCAGCCAATGCCTAAACCTGATCTAGATTATAATCGTGATGAAACTTTGTACGAGAGTGA GTACAAGCACTACGGCTTCTATGTTCAAGATTTAGTTTCTATCACCGACGAATGGCAAGTGCTAGCTGGTGTACGTTATG ACGAACAGAAGAAAGAGGGGGCGGGTAATAACAGTTATGCGGTCTCTCCTAAGTTTGGTGTGATTTACTCACCAGCCGAT AATGGCAGTATCTATGTTAACTACTCTAAGAGCTTCACGCCGCAAGGGATAGTGAACGACATTGATGATGTTAATGATGG TAAGAACCTAGATCCTGAATACGGTGAACAGTATGAGATTGGTACTAAGTGGGAGCTATTTGATGGCAGCTTACTATTAA CTGGTGCGGTATTCGATATTACTGTTTCGAACGTGACCGTAACAGAAGAGATTGAAGGTAGCAGCCAAACCATCACGACC CAGTCTGGTGAACAGCGCCATAAAGGTTTTGAAATGGGCGCTCAAGGTCAAGTTAGCGATAGCTGGTTTATGACGGGTTC TATGATGTACTTAGATGCTGAGTATCTTCGTCCTGAAACAGATAGTTTAAATGGTAAGACTCCTGTTGATGCGCCTGAGT GGTCAGCAAACGTCTGGACTCGTTATGAGATGACAGATGACTTAGCCCTTAACTTTGGTGCTATCTATGTGGGTGAGCGT TTCGCTAATACCAGTAACAGCATTAGCAAAGACGGCTATGTGCGTTTCGATATGGGCGCTGCATACACTATGGACGTAAT GGGGAGCGATGTTAGCATGCGTGTTAACGTGAAGAACCTATTCGATACAGATTATCTAGCTGGTGGCACCAACACTGATG TTACTGTGGGTCAAGGTCGTCACTTTAGCTTGGCACTAGAAGCTAAGTTCTAA
Upstream 100 bases:
>100_bases CTTGGCTTTGTAAAGAAGTGTAAAGAACCTTAAATAAAAATAGTTCTCATTTATATTGCGACTCAAATATTACATTCATG TTTCATTATTGGGGTTGGAT
Downstream 100 bases:
>100_bases ATAGCGAGTTAAAATCGAAAGAGAAAGCCTCAACCTTAAGTTGAGGCTTTTTTTTGTCTTTTATATCTTAAAATTGGCAA TTAAGTTTCGTTTCCCTATA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MSVGTSFKFSRVGLAIVAALASSTAFAEEATAESNVKVDSNIERISVTGRSFNDYNAGSSSGAMRGDIDILDTPQSVTVI PDFVTDEQLATNLSEVLVNDSSVTGGSEKWNRQVFNIRGFELSSGSGFLINGQQQWSHYVQPIETLQQVEVLKGPSSMLY GQSGPGGLINMVTKKPTYETMLDIGFDTDENGSTRFQLDAGGSLNEAETIRYRTVLVKQDTTYWREYQDGTNQERDRWLG YLNLEFDITDDLMLSLKYDHTQDKTGIDRGGWLDSSGDLIGGRDIIWDQPWAFTDNTISNLGAELTYHLSDDWKVKAGYN DQQFNRQRLDSSPSLISGSDDPFTDGYYVSPFDRYDDWQHKTGYVDFTGNFYTGDIEHQLLIGANMLDYYYGQLKDSGEK KQVVMPGQPMPKPDLDYNRDETLYESEYKHYGFYVQDLVSITDEWQVLAGVRYDEQKKEGAGNNSYAVSPKFGVIYSPAD NGSIYVNYSKSFTPQGIVNDIDDVNDGKNLDPEYGEQYEIGTKWELFDGSLLLTGAVFDITVSNVTVTEEIEGSSQTITT QSGEQRHKGFEMGAQGQVSDSWFMTGSMMYLDAEYLRPETDSLNGKTPVDAPEWSANVWTRYEMTDDLALNFGAIYVGER FANTSNSISKDGYVRFDMGAAYTMDVMGSDVSMRVNVKNLFDTDYLAGGTNTDVTVGQGRHFSLALEAKF
Sequences:
>Translated_710_residues MSVGTSFKFSRVGLAIVAALASSTAFAEEATAESNVKVDSNIERISVTGRSFNDYNAGSSSGAMRGDIDILDTPQSVTVI PDFVTDEQLATNLSEVLVNDSSVTGGSEKWNRQVFNIRGFELSSGSGFLINGQQQWSHYVQPIETLQQVEVLKGPSSMLY GQSGPGGLINMVTKKPTYETMLDIGFDTDENGSTRFQLDAGGSLNEAETIRYRTVLVKQDTTYWREYQDGTNQERDRWLG YLNLEFDITDDLMLSLKYDHTQDKTGIDRGGWLDSSGDLIGGRDIIWDQPWAFTDNTISNLGAELTYHLSDDWKVKAGYN DQQFNRQRLDSSPSLISGSDDPFTDGYYVSPFDRYDDWQHKTGYVDFTGNFYTGDIEHQLLIGANMLDYYYGQLKDSGEK KQVVMPGQPMPKPDLDYNRDETLYESEYKHYGFYVQDLVSITDEWQVLAGVRYDEQKKEGAGNNSYAVSPKFGVIYSPAD NGSIYVNYSKSFTPQGIVNDIDDVNDGKNLDPEYGEQYEIGTKWELFDGSLLLTGAVFDITVSNVTVTEEIEGSSQTITT QSGEQRHKGFEMGAQGQVSDSWFMTGSMMYLDAEYLRPETDSLNGKTPVDAPEWSANVWTRYEMTDDLALNFGAIYVGER FANTSNSISKDGYVRFDMGAAYTMDVMGSDVSMRVNVKNLFDTDYLAGGTNTDVTVGQGRHFSLALEAKF >Mature_709_residues SVGTSFKFSRVGLAIVAALASSTAFAEEATAESNVKVDSNIERISVTGRSFNDYNAGSSSGAMRGDIDILDTPQSVTVIP DFVTDEQLATNLSEVLVNDSSVTGGSEKWNRQVFNIRGFELSSGSGFLINGQQQWSHYVQPIETLQQVEVLKGPSSMLYG QSGPGGLINMVTKKPTYETMLDIGFDTDENGSTRFQLDAGGSLNEAETIRYRTVLVKQDTTYWREYQDGTNQERDRWLGY LNLEFDITDDLMLSLKYDHTQDKTGIDRGGWLDSSGDLIGGRDIIWDQPWAFTDNTISNLGAELTYHLSDDWKVKAGYND QQFNRQRLDSSPSLISGSDDPFTDGYYVSPFDRYDDWQHKTGYVDFTGNFYTGDIEHQLLIGANMLDYYYGQLKDSGEKK QVVMPGQPMPKPDLDYNRDETLYESEYKHYGFYVQDLVSITDEWQVLAGVRYDEQKKEGAGNNSYAVSPKFGVIYSPADN GSIYVNYSKSFTPQGIVNDIDDVNDGKNLDPEYGEQYEIGTKWELFDGSLLLTGAVFDITVSNVTVTEEIEGSSQTITTQ SGEQRHKGFEMGAQGQVSDSWFMTGSMMYLDAEYLRPETDSLNGKTPVDAPEWSANVWTRYEMTDDLALNFGAIYVGERF ANTSNSISKDGYVRFDMGAAYTMDVMGSDVSMRVNVKNLFDTDYLAGGTNTDVTVGQGRHFSLALEAKF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=702, Percent_Identity=28.3475783475783, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1787344, Length=761, Percent_Identity=24.1787122207622, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787024, Length=373, Percent_Identity=24.3967828418231, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1790743, Length=652, Percent_Identity=22.3926380368098, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79204; Mature: 79072
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGTSFKFSRVGLAIVAALASSTAFAEEATAESNVKVDSNIERISVTGRSFNDYNAGSS CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCEECCCCEEEEEECCCCCCCCCCCC SGAMRGDIDILDTPQSVTVIPDFVTDEQLATNLSEVLVNDSSVTGGSEKWNRQVFNIRGF CCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEECE ELSSGSGFLINGQQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLINMVTKKPTYET EECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCEEEEEECCCCHHH MLDIGFDTDENGSTRFQLDAGGSLNEAETIRYRTVLVKQDTTYWREYQDGTNQERDRWLG HEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCHHEEE YLNLEFDITDDLMLSLKYDHTQDKTGIDRGGWLDSSGDLIGGRDIIWDQPWAFTDNTISN EEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHH LGAELTYHLSDDWKVKAGYNDQQFNRQRLDSSPSLISGSDDPFTDGYYVSPFDRYDDWQH CCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCCCCCCCCC KTGYVDFTGNFYTGDIEHQLLIGANMLDYYYGQLKDSGEKKQVVMPGQPMPKPDLDYNRD CCCEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC ETLYESEYKHYGFYVQDLVSITDEWQVLAGVRYDEQKKEGAGNNSYAVSPKFGVIYSPAD CCHHHCCHHHCCCHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCEEECCCCCEEECCCC NGSIYVNYSKSFTPQGIVNDIDDVNDGKNLDPEYGEQYEIGTKWELFDGSLLLTGAVFDI CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCEEEEEEEEEE TVSNVTVTEEIEGSSQTITTQSGEQRHKGFEMGAQGQVSDSWFMTGSMMYLDAEYLRPET EECCEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEEECEEEEEEHHHCCCCC DSLNGKTPVDAPEWSANVWTRYEMTDDLALNFGAIYVGERFANTSNSISKDGYVRFDMGA CCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCEEEEEHHHCCCCCCCCCCCEEEEECCC AYTMDVMGSDVSMRVNVKNLFDTDYLAGGTNTDVTVGQGRHFSLALEAKF EEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCEEECCCCEEEEEEEECC >Mature Secondary Structure SVGTSFKFSRVGLAIVAALASSTAFAEEATAESNVKVDSNIERISVTGRSFNDYNAGSS CCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCEECCCCEEEEEECCCCCCCCCCCC SGAMRGDIDILDTPQSVTVIPDFVTDEQLATNLSEVLVNDSSVTGGSEKWNRQVFNIRGF CCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEECE ELSSGSGFLINGQQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLINMVTKKPTYET EECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCEEEEEECCCCHHH MLDIGFDTDENGSTRFQLDAGGSLNEAETIRYRTVLVKQDTTYWREYQDGTNQERDRWLG HEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCHHEEE YLNLEFDITDDLMLSLKYDHTQDKTGIDRGGWLDSSGDLIGGRDIIWDQPWAFTDNTISN EEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHH LGAELTYHLSDDWKVKAGYNDQQFNRQRLDSSPSLISGSDDPFTDGYYVSPFDRYDDWQH CCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCCCCCCCCC KTGYVDFTGNFYTGDIEHQLLIGANMLDYYYGQLKDSGEKKQVVMPGQPMPKPDLDYNRD CCCEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC ETLYESEYKHYGFYVQDLVSITDEWQVLAGVRYDEQKKEGAGNNSYAVSPKFGVIYSPAD CCHHHCCHHHCCCHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCEEECCCCCEEECCCC NGSIYVNYSKSFTPQGIVNDIDDVNDGKNLDPEYGEQYEIGTKWELFDGSLLLTGAVFDI CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCEEEEEEEEEE TVSNVTVTEEIEGSSQTITTQSGEQRHKGFEMGAQGQVSDSWFMTGSMMYLDAEYLRPET EECCEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEEECEEEEEEHHHCCCCC DSLNGKTPVDAPEWSANVWTRYEMTDDLALNFGAIYVGERFANTSNSISKDGYVRFDMGA CCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCEEEEEHHHCCCCCCCCCCCEEEEECCC AYTMDVMGSDVSMRVNVKNLFDTDYLAGGTNTDVTVGQGRHFSLALEAKF EEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]