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The map label for this gene is yeaV [H]

Identifier: 157963882

GI number: 157963882

Start: 4948040

End: 4949992

Strand: Reverse

Name: yeaV [H]

Synonym: Spea_4071

Alternate gene names: 157963882

Gene position: 4949992-4948040 (Counterclockwise)

Preceding gene: 157963883

Following gene: 157963876

Centisome position: 95.66

GC content: 45.06

Gene sequence:

>1953_bases
ATGAAAAAACACTTCGAACTGATCGATAAGCCGACTTTTTTCGGCGCACTATTACTGCTTTGTGCAGTTGTTATTCCCTT
ACTGTTATTTCCAGCAGAAGGAGCTGAGTGGATTGCAGTTGCTAAAACATTTATGACAGACAAACTAGGCTTTGCTTATT
TAGGTTTAGGCTTAGCGGCATTTTTCTTCATGATCTATATCGTTTTCTCTGATATCGGTCAGATTAAACTAGGCGATCCT
GATGAAAAGCCAGAGTTTGCGTTGGCGTCTTGGGCGGCAATGTTATTCTGTGGTGGTATCGGTGCCAGTATTTTGTATTG
GGGTACTATTGAGTGGGCATATTACTACCAAAACCCACCATTCCAGCTAGAAGCGGGCAGTGAAGAGGCGGTGCGTTGGG
CTGCCACTTACGGCTTGTTCCACTGGGGACCAATTGCTTGGTGTATCTATATGATCCCAGCGATTCCAATTGCTTACTTC
TTCTATGTGCGTAAGCAGCCAGTACTAAAAGTCTCTGCTGCTTTAATGCCGGTTATTGGCGAAGCGAATAGCTTTGGTAA
GCTAGGTAAAGTCATTGATGTGCTATTTATCTTCGGTCTATTGGGCGGCGCGGCAACCACGTTAGGTTTAGCGGCACCAT
TGATTAACGAAGGTATTAGCTACCTGTTTGGTATTCCTGCGACGACTGGCAGCCAAATTTTAGTGCTAATGGTATGTACC
GGTATCTTTGCTTACTCTTCTTACATGGGCATGGACAAAGGCATTAAGATTTTAAGTAACATTAACTTCTGGGGTGCCTT
AGGTTTACTGCTGTTTGTACTGGTTTGTGGCCCAACAATCTTCATGTTGGAAACAGGCTTAGATTCAATCGGTCGTATGT
TGTCTAACTTCTTTGTTATGGCGACTTGGGCTGAGCCTTTCGGTGGTATGGGTACGTTTGAAGATACCCACTTCCCACAA
GATTGGACGATTTTCTACTGGGCGTGGTGGTTAGTATTTGCGCCAAGTATGGGTCTATTTGTTGCACGTATTTCACGTGG
TAGAACGATTAAGCAGATGGTGTCTGGTGCGGTATTCTTCGGCTCACTAGGCTGTTCAATGTACTTCATCATTCTTGGTA
ACTACGGTTTATCACTGCAGTTGTCTGGTGAACTCGATGTGGTGAGCATTCTGAATGCAGAAGGCGCGACTCGCGCAATC
TTCGCAATTTTAGAAACACTGCCATTTAGTACCTTGGTCATTGCTGTATTTACCTTGTTATGTGTGATTTTCACCGCGAC
GACTTTCGACTCTATCTCTTACATCTTAGCGTCAGTTGTACAAACTAACGTGACTGAAGATCCTTTGCGTTGGAACCGTC
TGTTCTGGGCTTTCACTCTATCATTTATGCCTTCGGCACTGATGTTTATGGGCGGCTTAGCAACATTGCAAACGGCGGCG
ATTGTAGGTGGTTTACCACTTCTGACTATCGCGGTGATGTTAATGATCTCCGGTGTTAAGGCGGCGACATTAGACTTAGC
GCATCAAGATGATTACGTCGATCCTGTGATTAATATTTCAGATCTACCTGATGTCGACCCTTGGAGCAAAGAAGGTCAGG
CATTGGCTCGTTTTGAAGGACTACGTGATAACGCTATCGAAGCGGCAGAGCTTGAGCGTGAAGCTAACGATGCTATCTGG
ATGCTTAAGAAGCAGTTACGTAAAGAGGCATTATCACGTGGCGAATCTAGTGTTGACTTGGGCGATGCACCTGATGAGAT
CATCGAAAAACTACGCCAGTTAACTGATGACTCGATGAAAGCTAAAGAAGCTAAACTTGCGGCGTCAGAGCTTGCACAAG
AAGCACGTGTAGCCTTCGATGCGCTAATGCGTAGCAAGGAAGAGGAAGAGGCATTATTAGCTCAGGAAGAAGTTAAGCAG
GCTATTCAAGCACGATTGAATACCCCTAGCTAA

Upstream 100 bases:

>100_bases
CTATTTTAACTTCAGTTAAACCTGTCTGGCCTTCAGTACGGGGAGGAGCTTGTGGAGTGCACTCAATCAAATCTGTGTTT
AGTTGTTGCGGACAATAAAA

Downstream 100 bases:

>100_bases
TTGTGACTCTAACGACTAATGCCTGAGAATGGATTGTCAGGCATTAAGCGCTAACTGTCTAGTCCTAAAATAGGTTGACG
GTTTTTATTAAGCCAGTTGG

Product: choline/carnitine/betaine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAAFFFMIYIVFSDIGQIKLGDP
DEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPPFQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYF
FYVRKQPVLKVSAALMPVIGEANSFGKLGKVIDVLFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
GIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVMATWAEPFGGMGTFEDTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFFGSLGCSMYFIILGNYGLSLQLSGELDVVSILNAEGATRAI
FAILETLPFSTLVIAVFTLLCVIFTATTFDSISYILASVVQTNVTEDPLRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
IVGGLPLLTIAVMLMISGVKAATLDLAHQDDYVDPVINISDLPDVDPWSKEGQALARFEGLRDNAIEAAELEREANDAIW
MLKKQLRKEALSRGESSVDLGDAPDEIIEKLRQLTDDSMKAKEAKLAASELAQEARVAFDALMRSKEEEEALLAQEEVKQ
AIQARLNTPS

Sequences:

>Translated_650_residues
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAAFFFMIYIVFSDIGQIKLGDP
DEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPPFQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYF
FYVRKQPVLKVSAALMPVIGEANSFGKLGKVIDVLFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
GIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVMATWAEPFGGMGTFEDTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFFGSLGCSMYFIILGNYGLSLQLSGELDVVSILNAEGATRAI
FAILETLPFSTLVIAVFTLLCVIFTATTFDSISYILASVVQTNVTEDPLRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
IVGGLPLLTIAVMLMISGVKAATLDLAHQDDYVDPVINISDLPDVDPWSKEGQALARFEGLRDNAIEAAELEREANDAIW
MLKKQLRKEALSRGESSVDLGDAPDEIIEKLRQLTDDSMKAKEAKLAASELAQEARVAFDALMRSKEEEEALLAQEEVKQ
AIQARLNTPS
>Mature_650_residues
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAAFFFMIYIVFSDIGQIKLGDP
DEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPPFQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYF
FYVRKQPVLKVSAALMPVIGEANSFGKLGKVIDVLFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
GIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVMATWAEPFGGMGTFEDTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFFGSLGCSMYFIILGNYGLSLQLSGELDVVSILNAEGATRAI
FAILETLPFSTLVIAVFTLLCVIFTATTFDSISYILASVVQTNVTEDPLRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
IVGGLPLLTIAVMLMISGVKAATLDLAHQDDYVDPVINISDLPDVDPWSKEGQALARFEGLRDNAIEAAELEREANDAIW
MLKKQLRKEALSRGESSVDLGDAPDEIIEKLRQLTDDSMKAKEAKLAASELAQEARVAFDALMRSKEEEEALLAQEEVKQ
AIQARLNTPS

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=465, Percent_Identity=33.9784946236559, Blast_Score=291, Evalue=8e-80,
Organism=Escherichia coli, GI1786224, Length=462, Percent_Identity=33.5497835497836, Blast_Score=268, Evalue=1e-72,
Organism=Escherichia coli, GI1786506, Length=592, Percent_Identity=29.0540540540541, Blast_Score=236, Evalue=5e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 71370; Mature: 71370

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS01303 BCCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFFMIYIVFSDIGQIKLGDPDEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPP
HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC
FQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYFFYVRKQPVLKVSAALMPVIG
EEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
EANSFGKLGKVIDVLFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHH
GIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVM
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHEEE
ATWAEPFGGMGTFEDTHFPQDWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFF
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCHHHH
GSLGCSMYFIILGNYGLSLQLSGELDVVSILNAEGATRAIFAILETLPFSTLVIAVFTLL
HHHHHHEEEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH
CVIFTATTFDSISYILASVVQTNVTEDPLRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVGGLPLLTIAVMLMISGVKAATLDLAHQDDYVDPVINISDLPDVDPWSKEGQALARFEG
HHCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
LRDNAIEAAELEREANDAIWMLKKQLRKEALSRGESSVDLGDAPDEIIEKLRQLTDDSMK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHH
AKEAKLAASELAQEARVAFDALMRSKEEEEALLAQEEVKQAIQARLNTPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFFMIYIVFSDIGQIKLGDPDEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPP
HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC
FQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYFFYVRKQPVLKVSAALMPVIG
EEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
EANSFGKLGKVIDVLFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHH
GIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVM
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHEEE
ATWAEPFGGMGTFEDTHFPQDWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFF
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCHHHH
GSLGCSMYFIILGNYGLSLQLSGELDVVSILNAEGATRAIFAILETLPFSTLVIAVFTLL
HHHHHHEEEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH
CVIFTATTFDSISYILASVVQTNVTEDPLRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVGGLPLLTIAVMLMISGVKAATLDLAHQDDYVDPVINISDLPDVDPWSKEGQALARFEG
HHCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
LRDNAIEAAELEREANDAIWMLKKQLRKEALSRGESSVDLGDAPDEIIEKLRQLTDDSMK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHH
AKEAKLAASELAQEARVAFDALMRSKEEEEALLAQEEVKQAIQARLNTPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]