Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is abgT [H]

Identifier: 157963869

GI number: 157963869

Start: 4931239

End: 4932858

Strand: Direct

Name: abgT [H]

Synonym: Spea_4058

Alternate gene names: 157963869

Gene position: 4931239-4932858 (Clockwise)

Preceding gene: 157963868

Following gene: 157963870

Centisome position: 95.3

GC content: 47.53

Gene sequence:

>1620_bases
ATGAGCAGCAATAACGGAGATCGCCTGCATCAGTCAGGCGGTGCCTCTTTAGATCCTAATAATCAAGTCAGTGGTTGGTT
TGTTCGTTTCCTCAACATCGTAGAAAGGCTCGGAAACCTGTTACCTCACCCAATTACGCTATTTGCAATTTTTTGTGCCG
CCGTTGTCGTTATCAGTGGCATAGCCGGCTATTTTGAATTAAGTGTTGTCGACCCTAGACCCGAAGGTGCAGCGGGGCGC
AGCAGTGACGGTATGATCCATGTTGTCAGCCTGATGAATGCTGAAGGCCTGCGGATGATAGTCTCCAACTTAGTCACTAA
CTTCACCGGCTTTACTCCGCTAGGAACGGTACTTGTCGCCTTACTTGGTGTCGGTATTGCTGAGCGTTCAGGATTGCTAT
CAGCAGCAATGCGCTCACTGGTTATGGGAACATCGAAGCGTTTAGTGACTCTCACTATCGTGTTTGCAGGTATCGTTTCA
AATACTGCTGCGGAGCTTGGATACGTAGTACTTATCCCTATGGCGGCGATGATTTTCCATTCGCTAGGTCGTCATCCGCT
TGCAGGACTCGCGGCAGCTTTTGCTGGTGTGTCTGGTGGCTACAGCGCAAACTTGCTATTAGGCACAGTCGACCCATTAT
TATCAGGGATAACCGAAGCCGCTGCGCAAATGATTGACCCAGACTACACAGTTGGCCCAGAAGCAAACTGGTACTTTATG
TTTGCATCCACCTTCATCATTACCTTTTTAGGCGCCTTCGTTACCGAGAAAATTGTTGAGCCTAAACTGGGGAAATATGA
TCCGAGTCAGGCAGCCAATGATCTTGGCGAAGCCAAAATGGAGCAGATTAGCGCTATTGAAAAGCGTGGTCTAAAAGCCG
CAGGCATCGCTATTTTAGTCATGTCTGTGCTATTAGCACTGACAGTGGTACCAGAAGGTGCGCCTCTTAGAGATCCTAAA
ACCGGATTAGTCTCAGGCTCGCCATTTCTAAAAGGCATCGTTGCCTTTATCTTTATCTGCTTTGCCGTTCCAGGATTGGT
TTATGGCCGTATCGTTGGCACCATGAAGCGCGATATCGATGTGATTAATGCTATGTCACACAGCATGAGTAGCATGGGCA
TGTACATTGTTTTGGTATTCTTTGCCTCACAATTTGTCGCTTTCTTTACCTGGACTAATTTAGGTTCGGTATTTGCGGTT
GCAGGCGCTGATGCATTACAAGCAATTGGCCTAACAGGCCCCTTGGTTTTCGTTGTGTTTATCGCTATGTGCGGCTTTAT
TAACTTAATGCTCGGTAGTGCATCGGCGCAATGGGCAGTCACCGCACCTGTATTCGTACCTATGTTAATGCTAGTGGGTT
ATGCCCCGGAAACCATTCAGGCTGCTTATCGAATCGGCGACTCCGTCACTAATCTAATTACGCCAATGATGAGCTATTTT
GGTCTTATTTTGGCCGTCGCGTCGCAATACAATAAGAACCTAGGTATTGGCACCTTAATCGCGACTATGTTGCCATACAC
CATAGTATTCTTTATCGGTTGGACCAGCTTCTTCTTTATCTGGGTGTTCGGATTCGGATTACCTGTCGGGCCGGGGTCGG
CAACTTATTATACGCCTTAA

Upstream 100 bases:

>100_bases
AGCATCTTAGCGCCAATCAAACGCTATTCCTGCCGCAGATATACCCAAAAGCAATACCAAAATAATTAAAATAATAACAA
TATCTTGTAAGGAAAAACCC

Downstream 100 bases:

>100_bases
AAAAGAAGGGCCTAGGTGTTAAGAAGAGCTAAGATAGGGCGGGCTTCGCCCTTCGAGGACGTGACTGCGTCACTTCGAGA
GCGCGACGCTGTCGCTTCTA

Product: putative transporter AbgT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSSNNGDRLHQSGGASLDPNNQVSGWFVRFLNIVERLGNLLPHPITLFAIFCAAVVVISGIAGYFELSVVDPRPEGAAGR
SSDGMIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVALLGVGIAERSGLLSAAMRSLVMGTSKRLVTLTIVFAGIVS
NTAAELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYTVGPEANWYFM
FASTFIITFLGAFVTEKIVEPKLGKYDPSQAANDLGEAKMEQISAIEKRGLKAAGIAILVMSVLLALTVVPEGAPLRDPK
TGLVSGSPFLKGIVAFIFICFAVPGLVYGRIVGTMKRDIDVINAMSHSMSSMGMYIVLVFFASQFVAFFTWTNLGSVFAV
AGADALQAIGLTGPLVFVVFIAMCGFINLMLGSASAQWAVTAPVFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
GLILAVASQYNKNLGIGTLIATMLPYTIVFFIGWTSFFFIWVFGFGLPVGPGSATYYTP

Sequences:

>Translated_539_residues
MSSNNGDRLHQSGGASLDPNNQVSGWFVRFLNIVERLGNLLPHPITLFAIFCAAVVVISGIAGYFELSVVDPRPEGAAGR
SSDGMIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVALLGVGIAERSGLLSAAMRSLVMGTSKRLVTLTIVFAGIVS
NTAAELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYTVGPEANWYFM
FASTFIITFLGAFVTEKIVEPKLGKYDPSQAANDLGEAKMEQISAIEKRGLKAAGIAILVMSVLLALTVVPEGAPLRDPK
TGLVSGSPFLKGIVAFIFICFAVPGLVYGRIVGTMKRDIDVINAMSHSMSSMGMYIVLVFFASQFVAFFTWTNLGSVFAV
AGADALQAIGLTGPLVFVVFIAMCGFINLMLGSASAQWAVTAPVFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
GLILAVASQYNKNLGIGTLIATMLPYTIVFFIGWTSFFFIWVFGFGLPVGPGSATYYTP
>Mature_538_residues
SSNNGDRLHQSGGASLDPNNQVSGWFVRFLNIVERLGNLLPHPITLFAIFCAAVVVISGIAGYFELSVVDPRPEGAAGRS
SDGMIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVALLGVGIAERSGLLSAAMRSLVMGTSKRLVTLTIVFAGIVSN
TAAELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYTVGPEANWYFMF
ASTFIITFLGAFVTEKIVEPKLGKYDPSQAANDLGEAKMEQISAIEKRGLKAAGIAILVMSVLLALTVVPEGAPLRDPKT
GLVSGSPFLKGIVAFIFICFAVPGLVYGRIVGTMKRDIDVINAMSHSMSSMGMYIVLVFFASQFVAFFTWTNLGSVFAVA
GADALQAIGLTGPLVFVVFIAMCGFINLMLGSASAQWAVTAPVFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYFG
LILAVASQYNKNLGIGTLIATMLPYTIVFFIGWTSFFFIWVFGFGLPVGPGSATYYTP

Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]

COG id: COG2978

COG function: function code H; Putative p-aminobenzoyl-glutamate transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081879, Length=512, Percent_Identity=37.5, Blast_Score=337, Evalue=1e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004697
- InterPro:   IPR011540 [H]

Pfam domain/function: PF03806 ABG_transport [H]

EC number: NA

Molecular weight: Translated: 57016; Mature: 56885

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNNGDRLHQSGGASLDPNNQVSGWFVRFLNIVERLGNLLPHPITLFAIFCAAVVVISG
CCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IAGYFELSVVDPRPEGAAGRSSDGMIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVA
HHHHEEEEEECCCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH
LLGVGIAERSGLLSAAMRSLVMGTSKRLVTLTIVFAGIVSNTAAELGYVVLIPMAAMIFH
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYTVGPEANWYFM
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHH
FASTFIITFLGAFVTEKIVEPKLGKYDPSQAANDLGEAKMEQISAIEKRGLKAAGIAILV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSVLLALTVVPEGAPLRDPKTGLVSGSPFLKGIVAFIFICFAVPGLVYGRIVGTMKRDID
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VINAMSHSMSSMGMYIVLVFFASQFVAFFTWTNLGSVFAVAGADALQAIGLTGPLVFVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHCCCHHHHHHHH
IAMCGFINLMLGSASAQWAVTAPVFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLILAVASQYNKNLGIGTLIATMLPYTIVFFIGWTSFFFIWVFGFGLPVGPGSATYYTP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSNNGDRLHQSGGASLDPNNQVSGWFVRFLNIVERLGNLLPHPITLFAIFCAAVVVISG
CCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IAGYFELSVVDPRPEGAAGRSSDGMIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVA
HHHHEEEEEECCCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH
LLGVGIAERSGLLSAAMRSLVMGTSKRLVTLTIVFAGIVSNTAAELGYVVLIPMAAMIFH
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYTVGPEANWYFM
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHH
FASTFIITFLGAFVTEKIVEPKLGKYDPSQAANDLGEAKMEQISAIEKRGLKAAGIAILV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSVLLALTVVPEGAPLRDPKTGLVSGSPFLKGIVAFIFICFAVPGLVYGRIVGTMKRDID
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VINAMSHSMSSMGMYIVLVFFASQFVAFFTWTNLGSVFAVAGADALQAIGLTGPLVFVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHCCCHHHHHHHH
IAMCGFINLMLGSASAQWAVTAPVFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLILAVASQYNKNLGIGTLIATMLPYTIVFFIGWTSFFFIWVFGFGLPVGPGSATYYTP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]