Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is abgT [H]

Identifier: 157963868

GI number: 157963868

Start: 4929085

End: 4930704

Strand: Direct

Name: abgT [H]

Synonym: Spea_4057

Alternate gene names: 157963868

Gene position: 4929085-4930704 (Clockwise)

Preceding gene: 157963864

Following gene: 157963869

Centisome position: 95.26

GC content: 48.89

Gene sequence:

>1620_bases
ATGAGCAGTAATGACGGCGATAGCTTGCCTCTATCTAGCCAAGCCCCCTTAGATCCCAGTAACAAGCCTGGTGGCTTGTT
TGTCCGCTTCCTAAACGTAGTTGAAAGACTCGGTAACTTACTACCTCACCCCATCACTCTTTTCGCGCTATTTTGTGCCG
CTGTTGTGGTTATCAGTGGCATCGCCGGTTATTTTGAATTAACTGTAGTCGACCCAAGACCCGAAGGTGCATCGGGCCGC
AGCGCCGATGGTCTAATTCATGTAGTCAGCTTAATGAATGCCGAAGGCCTCCGGATGATCGTCTCCAACTTGGTGACCAA
CTTTACTGGCTTTACCCCATTGGGCACAGTGCTTGTCGCCTTACTCGGTGTGGGTATCGCCGATCGCTCGGGCTTGCTGT
CTGCCGCTATGCGCTTATTAGTCATGGGCGCTTCAAAGCGCTTAGTCACGCTAACTCTAGTATTTGCAGGTATCGTTTCT
AATACTGCATCTGAGCTAGGCTACGTGGTGCTTATCCCAATGGCAGCGATGATCTTCCACTCCTTGGGTCGCCATCCGCT
TGCAGGTCTAGCCGCTGCATTTGCCGGTGTATCCGGCGGCTATAGCGCTAACTTACTACTCGGCACCGTTGATCCACTGT
TATCTGGGATCACCGAAGCTGCAGCGCAGATGATCGATCCTGACTACCTTGTTGGCCCAGAAGTAAACTGGTACTTCATG
TTTGTCTCCACCTTTTTAATCACCTTCTTAGGTGCATTCGTTACCGAGAAAATCGTCGAACCTAAGTTGGGCAAATACGA
TGCTAGCGAAGCGGCGATTGACCTTAGTGAACAGAAGATGGATACGGTTAGCGCACTGGAGAAAAAGGGCCTAAAAATCG
CAGGCCTTGCGGTATTAGTGATGTCGGCAGTGCTTGCTTTAACTATTATTCCTGAGGGTGCGCCACTTCGAAACCAAGAA
ACTGGCTTAGTAGCTGGCTCTCCTTTCTTAAAAGGGATTGTGGCCTTTATCTTTGTTTGCTTTGCTATTCCAGGCCTAAT
TTATGGCCGTGTTGTGGGTAGCATGAAACGCGATATCGATGTCATCAACGCCATGTCACACAGCATGAGTAGCATGGGCA
TGTATATCGTCTTGGTATTCTTTGCTTCGCAGTTTGTCGCTTTCTTTAAGTGGACCAACTTAGGGGCGGTACTGGCAGTA
TCTGGCGCAGATGCACTTAATGCTATTGGCTTAACTGGGCCGCTAGTATTCGTACTGTTCATCATGATGTGTGGCTTTAT
TAACTTGATGCTAGGTAGTGCTTCAGCGCAGTGGGCTGTAACCGCACCTATCTTCGTACCTATGTTGATGTTGGTGGGTT
ACGCACCCGAAACCATTCAGGCGGCATACCGAATTGGTGACTCTGTAACAAACCTAATTACGCCAATGATGAGTTACTTC
GGCCTTATCCTGGCCGTCGCCTCGCAGTATAAGAAGAATCTAGGTATAGGCACATTGGTTGCGACCATGCTGCCATACTC
AATCGTGTTCTTTATCGGTTGGACCTGCTTCTTTTTCATCTGGGTATTTGTGATTGGTTTACCCGTTGGCCCGGGTGCAG
CAACTTATTATACGCCTTAA

Upstream 100 bases:

>100_bases
TATTTAATGCAATTGGCACAAAAGTAGCCCCACATTAGCTGTCACTCCAGCGTACCAATAACAAAAACAACAAAACGAAA
GCATATTGAAGGAAGACACT

Downstream 100 bases:

>100_bases
AAAAAGAAGGACCTAGGTGTTAAGAAGAGCTAAGATAGGGCGGGCTTCGCCCTGCTAGGACGCGACTTCGTCACTTCGAG
AGCGCGACGTTGTCGCTTCT

Product: putative transporter AbgT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSSNDGDSLPLSSQAPLDPSNKPGGLFVRFLNVVERLGNLLPHPITLFALFCAAVVVISGIAGYFELTVVDPRPEGASGR
SADGLIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVALLGVGIADRSGLLSAAMRLLVMGASKRLVTLTLVFAGIVS
NTASELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYLVGPEVNWYFM
FVSTFLITFLGAFVTEKIVEPKLGKYDASEAAIDLSEQKMDTVSALEKKGLKIAGLAVLVMSAVLALTIIPEGAPLRNQE
TGLVAGSPFLKGIVAFIFVCFAIPGLIYGRVVGSMKRDIDVINAMSHSMSSMGMYIVLVFFASQFVAFFKWTNLGAVLAV
SGADALNAIGLTGPLVFVLFIMMCGFINLMLGSASAQWAVTAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
GLILAVASQYKKNLGIGTLVATMLPYSIVFFIGWTCFFFIWVFVIGLPVGPGAATYYTP

Sequences:

>Translated_539_residues
MSSNDGDSLPLSSQAPLDPSNKPGGLFVRFLNVVERLGNLLPHPITLFALFCAAVVVISGIAGYFELTVVDPRPEGASGR
SADGLIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVALLGVGIADRSGLLSAAMRLLVMGASKRLVTLTLVFAGIVS
NTASELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYLVGPEVNWYFM
FVSTFLITFLGAFVTEKIVEPKLGKYDASEAAIDLSEQKMDTVSALEKKGLKIAGLAVLVMSAVLALTIIPEGAPLRNQE
TGLVAGSPFLKGIVAFIFVCFAIPGLIYGRVVGSMKRDIDVINAMSHSMSSMGMYIVLVFFASQFVAFFKWTNLGAVLAV
SGADALNAIGLTGPLVFVLFIMMCGFINLMLGSASAQWAVTAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
GLILAVASQYKKNLGIGTLVATMLPYSIVFFIGWTCFFFIWVFVIGLPVGPGAATYYTP
>Mature_538_residues
SSNDGDSLPLSSQAPLDPSNKPGGLFVRFLNVVERLGNLLPHPITLFALFCAAVVVISGIAGYFELTVVDPRPEGASGRS
ADGLIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVALLGVGIADRSGLLSAAMRLLVMGASKRLVTLTLVFAGIVSN
TASELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYLVGPEVNWYFMF
VSTFLITFLGAFVTEKIVEPKLGKYDASEAAIDLSEQKMDTVSALEKKGLKIAGLAVLVMSAVLALTIIPEGAPLRNQET
GLVAGSPFLKGIVAFIFVCFAIPGLIYGRVVGSMKRDIDVINAMSHSMSSMGMYIVLVFFASQFVAFFKWTNLGAVLAVS
GADALNAIGLTGPLVFVLFIMMCGFINLMLGSASAQWAVTAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYFG
LILAVASQYKKNLGIGTLVATMLPYSIVFFIGWTCFFFIWVFVIGLPVGPGAATYYTP

Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]

COG id: COG2978

COG function: function code H; Putative p-aminobenzoyl-glutamate transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081879, Length=500, Percent_Identity=37.8, Blast_Score=338, Evalue=7e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004697
- InterPro:   IPR011540 [H]

Pfam domain/function: PF03806 ABG_transport [H]

EC number: NA

Molecular weight: Translated: 56974; Mature: 56843

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNDGDSLPLSSQAPLDPSNKPGGLFVRFLNVVERLGNLLPHPITLFALFCAAVVVISG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IAGYFELTVVDPRPEGASGRSADGLIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVA
HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH
LLGVGIADRSGLLSAAMRLLVMGASKRLVTLTLVFAGIVSNTASELGYVVLIPMAAMIFH
HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYLVGPEVNWYFM
HHCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHH
FVSTFLITFLGAFVTEKIVEPKLGKYDASEAAIDLSEQKMDTVSALEKKGLKIAGLAVLV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
MSAVLALTIIPEGAPLRNQETGLVAGSPFLKGIVAFIFVCFAIPGLIYGRVVGSMKRDID
HHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VINAMSHSMSSMGMYIVLVFFASQFVAFFKWTNLGAVLAVSGADALNAIGLTGPLVFVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCHHHHHHHHH
IMMCGFINLMLGSASAQWAVTAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLILAVASQYKKNLGIGTLVATMLPYSIVFFIGWTCFFFIWVFVIGLPVGPGAATYYTP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SSNDGDSLPLSSQAPLDPSNKPGGLFVRFLNVVERLGNLLPHPITLFALFCAAVVVISG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IAGYFELTVVDPRPEGASGRSADGLIHVVSLMNAEGLRMIVSNLVTNFTGFTPLGTVLVA
HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH
LLGVGIADRSGLLSAAMRLLVMGASKRLVTLTLVFAGIVSNTASELGYVVLIPMAAMIFH
HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAAQMIDPDYLVGPEVNWYFM
HHCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHH
FVSTFLITFLGAFVTEKIVEPKLGKYDASEAAIDLSEQKMDTVSALEKKGLKIAGLAVLV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
MSAVLALTIIPEGAPLRNQETGLVAGSPFLKGIVAFIFVCFAIPGLIYGRVVGSMKRDID
HHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VINAMSHSMSSMGMYIVLVFFASQFVAFFKWTNLGAVLAVSGADALNAIGLTGPLVFVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCHHHHHHHHH
IMMCGFINLMLGSASAQWAVTAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYF
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLILAVASQYKKNLGIGTLVATMLPYSIVFFIGWTCFFFIWVFVIGLPVGPGAATYYTP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]