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The map label for this gene is bkdR [H]

Identifier: 157963735

GI number: 157963735

Start: 4772696

End: 4773148

Strand: Direct

Name: bkdR [H]

Synonym: Spea_3924

Alternate gene names: 157963735

Gene position: 4772696-4773148 (Clockwise)

Preceding gene: 157963732

Following gene: 157963736

Centisome position: 92.23

GC content: 47.46

Gene sequence:

>453_bases
ATGGATAATAAGGATCGCAATATACTCGCCATATTGCAGCGCCAGGGCCGAATCGCAATTAGTGAGCTCGCAGCCAGACT
CAACATGTCTGATACCCCCTGCCTGCGTCGGGTGAGAAAACTCGAGCAGACTGGCGTGATCAGTGGCTATGGGGCGCAAA
TCGATCCCAAAGAAGTAGGATTAAACGTGGTGGTTTACGCCTTCGTGCGTTTAAAAGAAAACTCAGATCAATATGCCATC
CTCTTCGAAGAAAGCATGGAGAATTTAGAGCAGGTAATGGAGTGCTCCGTAGTAACAGGCGCCCATGACTATTTATTAAA
AATCGTCGCCAGCGATCTACTCAGCTATGAAAGCTTCGTTAAAAAGTCGCTTGGCAGTCTAAACTGTATCGCGGGGATCG
AATCGACCGTGGTGTTAAAGCAAAACTTCTCACGTAACACCTTACCCCTATAG

Upstream 100 bases:

>100_bases
ATCATTAAATTAGCTCCGATAACTTTCAATTTAGATCGAAATCCCCTATAAAAAGCTTAGTTAATATTGATTTTCACCAT
AAGAATAAAAGGTTGTATCT

Downstream 100 bases:

>100_bases
TCATTTAAGTCAGGTGGCTAAATACGTGCTGTTTATGAACCCACTCAAGTGAGATAATTCAATCACTAGGCCTTAAGTAA
CAGCACTATGATCCACACAA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDNKDRNILAILQRQGRIAISELAARLNMSDTPCLRRVRKLEQTGVISGYGAQIDPKEVGLNVVVYAFVRLKENSDQYAI
LFEESMENLEQVMECSVVTGAHDYLLKIVASDLLSYESFVKKSLGSLNCIAGIESTVVLKQNFSRNTLPL

Sequences:

>Translated_150_residues
MDNKDRNILAILQRQGRIAISELAARLNMSDTPCLRRVRKLEQTGVISGYGAQIDPKEVGLNVVVYAFVRLKENSDQYAI
LFEESMENLEQVMECSVVTGAHDYLLKIVASDLLSYESFVKKSLGSLNCIAGIESTVVLKQNFSRNTLPL
>Mature_150_residues
MDNKDRNILAILQRQGRIAISELAARLNMSDTPCLRRVRKLEQTGVISGYGAQIDPKEVGLNVVVYAFVRLKENSDQYAI
LFEESMENLEQVMECSVVTGAHDYLLKIVASDLLSYESFVKKSLGSLNCIAGIESTVVLKQNFSRNTLPL

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=26, Blast_Score=93, Evalue=6e-21,
Organism=Escherichia coli, GI1790182, Length=149, Percent_Identity=27.5167785234899, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16741; Mature: 16741

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKDRNILAILQRQGRIAISELAARLNMSDTPCLRRVRKLEQTGVISGYGAQIDPKEVG
CCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHC
LNVVVYAFVRLKENSDQYAILFEESMENLEQVMECSVVTGAHDYLLKIVASDLLSYESFV
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KKSLGSLNCIAGIESTVVLKQNFSRNTLPL
HHHCCCCCHHHCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MDNKDRNILAILQRQGRIAISELAARLNMSDTPCLRRVRKLEQTGVISGYGAQIDPKEVG
CCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHC
LNVVVYAFVRLKENSDQYAILFEESMENLEQVMECSVVTGAHDYLLKIVASDLLSYESFV
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KKSLGSLNCIAGIESTVVLKQNFSRNTLPL
HHHCCCCCHHHCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]