Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963732

Identifier: 157963732

GI number: 157963732

Start: 4769883

End: 4770188

Strand: Direct

Name: 157963732

Synonym: Spea_3921

Alternate gene names: NA

Gene position: 4769883-4770188 (Clockwise)

Preceding gene: 157963730

Following gene: 157963735

Centisome position: 92.18

GC content: 40.85

Gene sequence:

>306_bases
ATGAGAAAAACAATTACTCATGCAGTACTGTTAGGCGCTGGATTATTATTCTCAACCGCTAGTGTTGCGGCAATGAGTCC
GATTGCAGCTTGTAATGACTGCTCAAAGCAAGAAACTGAGCAAACTGCAAAAAATCTTCAAGATAGCAGCGTATACGTTG
TGGATTTTGTGAATCTTACTGCACAGAAATTTGTTACCGATAAGCAGGGTGTAACCCTACTTAGCAAGCTTTCAATTGGT
GAGCTTAACCGCATCAACCAGAAGTATGATTACCGAAAAGTTCACTTAAGAGCCGTTCAGCCTTAA

Upstream 100 bases:

>100_bases
TAAACAACAACTTAATAACAAATAGTTCTGGACTCTGCCTAAAATATAGCCTAAATTAAAACTGTGACAAAGATCACTAT
TTCATAAAAAGGAACCTACT

Downstream 100 bases:

>100_bases
GCTCTTTGATTTCGCTACAGGCTACCAGCCTGTAGCGGTAATTTTTATATCCCCTTAACAGCTGTAATTAAGTTTTCAAT
ATCAGCCATATCATTATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MRKTITHAVLLGAGLLFSTASVAAMSPIAACNDCSKQETEQTAKNLQDSSVYVVDFVNLTAQKFVTDKQGVTLLSKLSIG
ELNRINQKYDYRKVHLRAVQP

Sequences:

>Translated_101_residues
MRKTITHAVLLGAGLLFSTASVAAMSPIAACNDCSKQETEQTAKNLQDSSVYVVDFVNLTAQKFVTDKQGVTLLSKLSIG
ELNRINQKYDYRKVHLRAVQP
>Mature_101_residues
MRKTITHAVLLGAGLLFSTASVAAMSPIAACNDCSKQETEQTAKNLQDSSVYVVDFVNLTAQKFVTDKQGVTLLSKLSIG
ELNRINQKYDYRKVHLRAVQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11100; Mature: 11100

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTITHAVLLGAGLLFSTASVAAMSPIAACNDCSKQETEQTAKNLQDSSVYVVDFVNLT
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEHHHH
AQKFVTDKQGVTLLSKLSIGELNRINQKYDYRKVHLRAVQP
HHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure
MRKTITHAVLLGAGLLFSTASVAAMSPIAACNDCSKQETEQTAKNLQDSSVYVVDFVNLT
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEHHHH
AQKFVTDKQGVTLLSKLSIGELNRINQKYDYRKVHLRAVQP
HHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA