Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963725

Identifier: 157963725

GI number: 157963725

Start: 4759907

End: 4761361

Strand: Reverse

Name: 157963725

Synonym: Spea_3914

Alternate gene names: NA

Gene position: 4761361-4759907 (Counterclockwise)

Preceding gene: 157963726

Following gene: 157963724

Centisome position: 92.01

GC content: 44.19

Gene sequence:

>1455_bases
ATGATGAATGAATTAACGTTAAACAGAGTTGTATCATTAGCGGCTTTAGCGCTGATAGCCTTACCAGTCGGTATCGCCTG
TATCATCTTAGGTTTTGGTATGGGTGACACGCCATGTATCCTTTGTTGGCAAGAGCGTACAGCTATGGTGCTAGTATCGC
TGATCGCGATTTTTATCATGCGTTACGGTTTAAAGCCTAAGTATATTGGCGCGCTAATCATTACTGCTGTGTACGGCTTG
TGGGCGGGTTACCGTCATAGCTCTGCACATATTCTTCGTGATATTGGCCAAGGCTTTGGTCCGGCCATTTTTGGCGTACA
CACCTATGTTTGGGTGATCGTAGTGTTTGCGATTATCTTACTGTTCGCTGGCGTACTAATGTTGCTACAAGGCGACAAGC
TAGTTGAGAAGAGTGACAGCAGTGAGTGGAGCTTGCTGAACAAGGTAACGGTTAACGTATTCTTGGTCATTATTTGTTTT
AATATCGTTCAGGCATTTACCCAGACTGGTCCATTCCCATATATCGGCCAAAGCGATCCTGTGCGTATGACCTTCGATTC
GAATAAAACGATCTGGTCTACGGCTAATTGGCCAACACTGTCAAAGCTATCGGCTCGTGGTGCTTACTCAATCGAGAAGC
CTGACTTTGCGGCTATGACAAAGGATGATGCGACTAAAGTGACGGCTAACGGCGAGTTAACAGCGCTTGAGAGTGTTACT
TTGCCAGCTGATATCTTCGGTCTAGCAACAGGCATTAGCTATAATCCTCAAAGCCAACTATTTGCAGTGGTTACCAGTAA
TAACTGGGTTTATTTCCTGAATGCTGAGCTGACTGAAATTTTGGCTAAGGTGCAGATTGATGCGGCATTCTCTGCTGAAA
TATCTAACCTTGCAGGTGTGACTTTTGACGGTCAAACATCAGTCTTAGTGACTGCCGATCATAAGAGTTTTGTGCGTGTT
GAATACGACCCAAGTGTGAAGTTTGATGATACTTACGGACGATTCATCGAAGGAACTGACGGGGTTCGTGAGCTTAAACG
CAGTCGCTTTGCCACTGTACGTGCCAAGTATAACTATGTTGCCGACGTAGGTTGGGATGCTCAAACTCAAGAGTATCTAA
TGGTCACGTTACCAGATGAGCAGCGCAATAACTTTGTTGTTTCACGTCTAAGCGGTAAAGATTATGAGCTAAACAGCGAA
GCAATCATTAGCATTGATACTCAGGTTTATCCAAATGTGACTGGCATTAGTGTTATCGATGATAAAGCTTACTTGTTAAG
CCATTCTGGCCAGCAACTGCTAACCATGAATTTAGAGACTAATACTGTTGTTGCAGCAAGCGATGTCGTAGGGCTTAATA
ACCCACAAGCAATGACATTACTGGGTGATAAGTTTGCTGTGTTAGATGCGGCGGAAGGTAATAACCGAGTTAACTTCTAC
CAAGTTCAGCATTAA

Upstream 100 bases:

>100_bases
GCGCATATTTTTTTAGCTCTGAGCATTTTAATGAGCATGGGTATTTGGTTGATAGCCACTTGGGGCATGTTAGTCCCTGC
CGGTAACTTGTGAGAACACG

Downstream 100 bases:

>100_bases
TCATTTAAAGCAATGCAATAAATTGCTTTGAGAATACCAAGCCCTTAATTAATTCTTAAGGGCTTTTTTATGCCTCAAGT
AACCCCATATTGCGTCTCTG

Product: disulfide bond formation protein DsbB

Products: NA

Alternate protein names: DsbB Family Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB Family; Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB; Dsbb-Like Protein

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MMNELTLNRVVSLAALALIALPVGIACIILGFGMGDTPCILCWQERTAMVLVSLIAIFIMRYGLKPKYIGALIITAVYGL
WAGYRHSSAHILRDIGQGFGPAIFGVHTYVWVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICF
NIVQAFTQTGPFPYIGQSDPVRMTFDSNKTIWSTANWPTLSKLSARGAYSIEKPDFAAMTKDDATKVTANGELTALESVT
LPADIFGLATGISYNPQSQLFAVVTSNNWVYFLNAELTEILAKVQIDAAFSAEISNLAGVTFDGQTSVLVTADHKSFVRV
EYDPSVKFDDTYGRFIEGTDGVRELKRSRFATVRAKYNYVADVGWDAQTQEYLMVTLPDEQRNNFVVSRLSGKDYELNSE
AIISIDTQVYPNVTGISVIDDKAYLLSHSGQQLLTMNLETNTVVAASDVVGLNNPQAMTLLGDKFAVLDAAEGNNRVNFY
QVQH

Sequences:

>Translated_484_residues
MMNELTLNRVVSLAALALIALPVGIACIILGFGMGDTPCILCWQERTAMVLVSLIAIFIMRYGLKPKYIGALIITAVYGL
WAGYRHSSAHILRDIGQGFGPAIFGVHTYVWVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICF
NIVQAFTQTGPFPYIGQSDPVRMTFDSNKTIWSTANWPTLSKLSARGAYSIEKPDFAAMTKDDATKVTANGELTALESVT
LPADIFGLATGISYNPQSQLFAVVTSNNWVYFLNAELTEILAKVQIDAAFSAEISNLAGVTFDGQTSVLVTADHKSFVRV
EYDPSVKFDDTYGRFIEGTDGVRELKRSRFATVRAKYNYVADVGWDAQTQEYLMVTLPDEQRNNFVVSRLSGKDYELNSE
AIISIDTQVYPNVTGISVIDDKAYLLSHSGQQLLTMNLETNTVVAASDVVGLNNPQAMTLLGDKFAVLDAAEGNNRVNFY
QVQH
>Mature_484_residues
MMNELTLNRVVSLAALALIALPVGIACIILGFGMGDTPCILCWQERTAMVLVSLIAIFIMRYGLKPKYIGALIITAVYGL
WAGYRHSSAHILRDIGQGFGPAIFGVHTYVWVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICF
NIVQAFTQTGPFPYIGQSDPVRMTFDSNKTIWSTANWPTLSKLSARGAYSIEKPDFAAMTKDDATKVTANGELTALESVT
LPADIFGLATGISYNPQSQLFAVVTSNNWVYFLNAELTEILAKVQIDAAFSAEISNLAGVTFDGQTSVLVTADHKSFVRV
EYDPSVKFDDTYGRFIEGTDGVRELKRSRFATVRAKYNYVADVGWDAQTQEYLMVTLPDEQRNNFVVSRLSGKDYELNSE
AIISIDTQVYPNVTGISVIDDKAYLLSHSGQQLLTMNLETNTVVAASDVVGLNNPQAMTLLGDKFAVLDAAEGNNRVNFY
QVQH

Specific function: Unknown

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53166; Mature: 53166

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNELTLNRVVSLAALALIALPVGIACIILGFGMGDTPCILCWQERTAMVLVSLIAIFIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
RYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYVWVIVVFAIIL
HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICFNIVQAFTQTGPFPYIGQSDP
HHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VRMTFDSNKTIWSTANWPTLSKLSARGAYSIEKPDFAAMTKDDATKVTANGELTALESVT
EEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCEEEEEEEC
LPADIFGLATGISYNPQSQLFAVVTSNNWVYFLNAELTEILAKVQIDAAFSAEISNLAGV
CCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCE
TFDGQTSVLVTADHKSFVRVEYDPSVKFDDTYGRFIEGTDGVRELKRSRFATVRAKYNYV
EECCCEEEEEEECCCCEEEEEECCCCEECCCCCCEECCCHHHHHHHHHHHEEEEEEEEEE
ADVGWDAQTQEYLMVTLPDEQRNNFVVSRLSGKDYELNSEAIISIDTQVYPNVTGISVID
EECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEECCCEEEEEECEECCCCCCEEEEC
DKAYLLSHSGQQLLTMNLETNTVVAASDVVGLNNPQAMTLLGDKFAVLDAAEGNNRVNFY
CCEEEECCCCCEEEEEEECCCEEEEEECEECCCCCCEEEEECCCEEEEEECCCCCEEEEE
QVQH
EECC
>Mature Secondary Structure
MMNELTLNRVVSLAALALIALPVGIACIILGFGMGDTPCILCWQERTAMVLVSLIAIFIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
RYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYVWVIVVFAIIL
HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICFNIVQAFTQTGPFPYIGQSDP
HHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VRMTFDSNKTIWSTANWPTLSKLSARGAYSIEKPDFAAMTKDDATKVTANGELTALESVT
EEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCEEEEEEEC
LPADIFGLATGISYNPQSQLFAVVTSNNWVYFLNAELTEILAKVQIDAAFSAEISNLAGV
CCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCE
TFDGQTSVLVTADHKSFVRVEYDPSVKFDDTYGRFIEGTDGVRELKRSRFATVRAKYNYV
EECCCEEEEEEECCCCEEEEEECCCCEECCCCCCEECCCHHHHHHHHHHHEEEEEEEEEE
ADVGWDAQTQEYLMVTLPDEQRNNFVVSRLSGKDYELNSEAIISIDTQVYPNVTGISVID
EECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEECCCEEEEEECEECCCCCCEEEEC
DKAYLLSHSGQQLLTMNLETNTVVAASDVVGLNNPQAMTLLGDKFAVLDAAEGNNRVNFY
CCEEEECCCCCEEEEEEECCCEEEEEECEECCCCCCEEEEECCCEEEEEECCCCCEEEEE
QVQH
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA