| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yaiP [C]
Identifier: 157963704
GI number: 157963704
Start: 4738464
End: 4740221
Strand: Direct
Name: yaiP [C]
Synonym: Spea_3893
Alternate gene names: 157963704
Gene position: 4738464-4740221 (Clockwise)
Preceding gene: 157963703
Following gene: 157963705
Centisome position: 91.57
GC content: 49.54
Gene sequence:
>1758_bases ATGCGTCTTGCCCTCGTTATCCCCAACTACAACCATGCTGGTGCCATCGAGCAGACTCTCGAACGCCTGGCAGCCTTCGA GCTTCCCTGCTACCTCATTAACGATGGCAGCGATGATGAAACTCGTTTTATACTGATCGAGCTTGCCGAAAAGTACGACT GGGTGACCTTGCTACACCATCCGTTTAATCGTGGCAAAGGCGCTGCGGTGATGACGGGGCTACGCACCGCTTATGCCGAT GGCTTTACTCATGCGCTACAGGTCGATGCCGATGGTCAGCATGACTTAGATGATATTCCGGCAATGATAGAGCGGGCAGA ATTAGCGCCAGAGGCATTAATTTCAGGTCTGCCACAGTACGATGATTCCGTACCAAAGGGCCGCCTCTATGGCCGCTATA TCACCCACTTCTGGGTGTGGATAGAAACCTTAAGTTTCGATATCCAAGACTCCATGTGTGGCTTTCGCATCTACCCACTA GCCGCGACTGAGAAACTGTTTTTAAGCCATGCCTTGGGCGAGCGCATGGATTTTGATATCGAAGTGTTAGTGCGTCTTTA CTGGCAAGGGGTAAAGGTTATCCATCTGCCGACAAGAGTCATCTACCCCGAAGATGGGGTGAGCCATTTTCAAGGCCTCA AAGATAATGTGCGCATCTCTTTGATGCACAGTAAGCTCTTCTTTGGCATGTTATTGCGCCAACCTAAAAAGTTGTTTCAA AGGCTAAAGCATTCTCTCGTAGGCTCTAACCAAAACAAACATTGGTCCAACATGCGTGAGCGTGGCAGTTATTGGGGCAT AAAACTGATCGCCGAAAGCTACCGCCTAGGCGGCCATTGGCTATGCCGCGCCATCATGTATCCGGTGATTGTTTATTTCT TCTTAACCGGTACTACCGCACGCGATGCATCGAAGCAGTTTCTAACTCATGTTAAGCACCAGCGCCCTAACCACCCACAC TTAGGTGAGCCACTCAGTTGGCGCGATAGCCTGAAGCACTTTTTCGCCTTTGGTAACGCCGCCCTCGATAGAATCGATGC CTGGTGCGATCGCATCAAACTCGAACAGGTCGATTTCCCTAATCGTGAGATGCTCGCTAACCAATTACTAGCAGGTAATG GCGCCGTATTATTGGTCTCACACCTAGGTAACTTAGAGCTATGTAGAGCCATATCTATCCACCAGCGCCAAGTCAAAGTT AACGTCATGGTGCTGACACAAAATGCCGAGAACTTTAACAAGGTACTCAAGCAACTCAACCCCGATAGCTCATTAAACCT GATTCAGGTGACAGAACTCGGCCCGAGTACATCAATGCTATTGCAGCAAAAGATCGAAGCCGGTGAACTGGTGGTTATTG CAGGGGATAGAACCTCTTCGCAAACCGCTGGACGAGTTATCTATCAGGAGTTTCTAGGTGAGCAGGCCGCATTCCCACAG GGGCCATTTATTCTGGCGGGATTGCTGGACTGCCCGGTTTATACCATGTTCTGCCTACGTCAAAATGGACGCTACCATGT GCACCTAGAACATTTCGCCGAGACCTTAAAAGGCCCAAGGGCAGGACGCAGCCAACGAATTGAACAGGCCGTAAACGAAT TTAGCCGGCGCTTAGAGCACTTTGCTCTGAGTGAGCCGCTGCAATGGTTTAATTTTTATGATTTCTGGCGCAAGGACGAA GAGTTCCAACGTGCAGATGTGCAAAGCAGTGAACGCTGTAGCAGTAGTAGCAATACTAAAGGACAAGCAAGTAAATGA
Upstream 100 bases:
>100_bases TCATGTTTGCCTATAGCGATGGTGACAAACGTTTCGCATCGGGGCGTATCGCGCTCAATAGTGAAACAACCCAAGTTATC AACAGCGCGGATAGCAACTA
Downstream 100 bases:
>100_bases CCCAAGATAATACCTATAACCTTAGCCAGCAAACCGTTGAATTTGGCTATAACAGCCTATCGCTTGAAGATGTGGTGGCT ATCGCCAAAGGCGCAACAGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Acyltransferase; Acyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Glycosyl Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Dolichyl-Phosphate Mannose Synthase; Dolichol-Phosphate Mannosyltransferase; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyl Transferase GT2 Family; Transmembrane Family-2 Glycosyl Transferase; Acetyltransferase; B-Glycosyltransferase Glycosyltransferase Family 2 Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Lipid IVA Acyltransferase Family Protein; Glycosyltransferase/Dolichyl-Phosphate Mannose Synthase; Glycosyl Transferase Family 2 And Acyltransferase Domains; Glycosyltransferases; Acyltransferase-Like Protein; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase Family; Family 2 Glycosyl Transferase Protein; Oligosaccharide Acyltransferase Family Protein; B-Glycosyltransferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Glycosyltransferase-Like Protein; Bifunctional Glycosyl Transferase/Acyl Transferase; Glycosyl Transferase Gt2J; Dolichyl-Phosphate Mannose Synthase-Like Protein; XanthomoNADin Biosynthesis Acyltransferase Protein; Glycosyl Transferase Domain-Containing Protein; Cell Wall Biosynthesis Glycosyltransferase
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MRLALVIPNYNHAGAIEQTLERLAAFELPCYLINDGSDDETRFILIELAEKYDWVTLLHHPFNRGKGAAVMTGLRTAYAD GFTHALQVDADGQHDLDDIPAMIERAELAPEALISGLPQYDDSVPKGRLYGRYITHFWVWIETLSFDIQDSMCGFRIYPL AATEKLFLSHALGERMDFDIEVLVRLYWQGVKVIHLPTRVIYPEDGVSHFQGLKDNVRISLMHSKLFFGMLLRQPKKLFQ RLKHSLVGSNQNKHWSNMRERGSYWGIKLIAESYRLGGHWLCRAIMYPVIVYFFLTGTTARDASKQFLTHVKHQRPNHPH LGEPLSWRDSLKHFFAFGNAALDRIDAWCDRIKLEQVDFPNREMLANQLLAGNGAVLLVSHLGNLELCRAISIHQRQVKV NVMVLTQNAENFNKVLKQLNPDSSLNLIQVTELGPSTSMLLQQKIEAGELVVIAGDRTSSQTAGRVIYQEFLGEQAAFPQ GPFILAGLLDCPVYTMFCLRQNGRYHVHLEHFAETLKGPRAGRSQRIEQAVNEFSRRLEHFALSEPLQWFNFYDFWRKDE EFQRADVQSSERCSSSSNTKGQASK
Sequences:
>Translated_585_residues MRLALVIPNYNHAGAIEQTLERLAAFELPCYLINDGSDDETRFILIELAEKYDWVTLLHHPFNRGKGAAVMTGLRTAYAD GFTHALQVDADGQHDLDDIPAMIERAELAPEALISGLPQYDDSVPKGRLYGRYITHFWVWIETLSFDIQDSMCGFRIYPL AATEKLFLSHALGERMDFDIEVLVRLYWQGVKVIHLPTRVIYPEDGVSHFQGLKDNVRISLMHSKLFFGMLLRQPKKLFQ RLKHSLVGSNQNKHWSNMRERGSYWGIKLIAESYRLGGHWLCRAIMYPVIVYFFLTGTTARDASKQFLTHVKHQRPNHPH LGEPLSWRDSLKHFFAFGNAALDRIDAWCDRIKLEQVDFPNREMLANQLLAGNGAVLLVSHLGNLELCRAISIHQRQVKV NVMVLTQNAENFNKVLKQLNPDSSLNLIQVTELGPSTSMLLQQKIEAGELVVIAGDRTSSQTAGRVIYQEFLGEQAAFPQ GPFILAGLLDCPVYTMFCLRQNGRYHVHLEHFAETLKGPRAGRSQRIEQAVNEFSRRLEHFALSEPLQWFNFYDFWRKDE EFQRADVQSSERCSSSSNTKGQASK >Mature_585_residues MRLALVIPNYNHAGAIEQTLERLAAFELPCYLINDGSDDETRFILIELAEKYDWVTLLHHPFNRGKGAAVMTGLRTAYAD GFTHALQVDADGQHDLDDIPAMIERAELAPEALISGLPQYDDSVPKGRLYGRYITHFWVWIETLSFDIQDSMCGFRIYPL AATEKLFLSHALGERMDFDIEVLVRLYWQGVKVIHLPTRVIYPEDGVSHFQGLKDNVRISLMHSKLFFGMLLRQPKKLFQ RLKHSLVGSNQNKHWSNMRERGSYWGIKLIAESYRLGGHWLCRAIMYPVIVYFFLTGTTARDASKQFLTHVKHQRPNHPH LGEPLSWRDSLKHFFAFGNAALDRIDAWCDRIKLEQVDFPNREMLANQLLAGNGAVLLVSHLGNLELCRAISIHQRQVKV NVMVLTQNAENFNKVLKQLNPDSSLNLIQVTELGPSTSMLLQQKIEAGELVVIAGDRTSSQTAGRVIYQEFLGEQAAFPQ GPFILAGLLDCPVYTMFCLRQNGRYHVHLEHFAETLKGPRAGRSQRIEQAVNEFSRRLEHFALSEPLQWFNFYDFWRKDE EFQRADVQSSERCSSSSNTKGQASK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66902; Mature: 66902
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLALVIPNYNHAGAIEQTLERLAAFELPCYLINDGSDDETRFILIELAEKYDWVTLLHH CEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEHHHCCEEEEEEC PFNRGKGAAVMTGLRTAYADGFTHALQVDADGQHDLDDIPAMIERAELAPEALISGLPQY CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCC DDSVPKGRLYGRYITHFWVWIETLSFDIQDSMCGFRIYPLAATEKLFLSHALGERMDFDI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHH EVLVRLYWQGVKVIHLPTRVIYPEDGVSHFQGLKDNVRISLMHSKLFFGMLLRQPKKLFQ HHHHHHHHCCEEEEEECEEEECCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH RLKHSLVGSNQNKHWSNMRERGSYWGIKLIAESYRLGGHWLCRAIMYPVIVYFFLTGTTA HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC RDASKQFLTHVKHQRPNHPHLGEPLSWRDSLKHFFAFGNAALDRIDAWCDRIKLEQVDFP HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NREMLANQLLAGNGAVLLVSHLGNLELCRAISIHQRQVKVNVMVLTQNAENFNKVLKQLN CHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHEEEEEEEEEEECCHHHHHHHHHHCC PDSSLNLIQVTELGPSTSMLLQQKIEAGELVVIAGDRTSSQTAGRVIYQEFLGEQAAFPQ CCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC GPFILAGLLDCPVYTMFCLRQNGRYHVHLEHFAETLKGPRAGRSQRIEQAVNEFSRRLEH CCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH FALSEPLQWFNFYDFWRKDEEFQRADVQSSERCSSSSNTKGQASK HHHHCHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRLALVIPNYNHAGAIEQTLERLAAFELPCYLINDGSDDETRFILIELAEKYDWVTLLHH CEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEHHHCCEEEEEEC PFNRGKGAAVMTGLRTAYADGFTHALQVDADGQHDLDDIPAMIERAELAPEALISGLPQY CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCC DDSVPKGRLYGRYITHFWVWIETLSFDIQDSMCGFRIYPLAATEKLFLSHALGERMDFDI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHH EVLVRLYWQGVKVIHLPTRVIYPEDGVSHFQGLKDNVRISLMHSKLFFGMLLRQPKKLFQ HHHHHHHHCCEEEEEECEEEECCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH RLKHSLVGSNQNKHWSNMRERGSYWGIKLIAESYRLGGHWLCRAIMYPVIVYFFLTGTTA HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC RDASKQFLTHVKHQRPNHPHLGEPLSWRDSLKHFFAFGNAALDRIDAWCDRIKLEQVDFP HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NREMLANQLLAGNGAVLLVSHLGNLELCRAISIHQRQVKVNVMVLTQNAENFNKVLKQLN CHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHEEEEEEEEEEECCHHHHHHHHHHCC PDSSLNLIQVTELGPSTSMLLQQKIEAGELVVIAGDRTSSQTAGRVIYQEFLGEQAAFPQ CCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC GPFILAGLLDCPVYTMFCLRQNGRYHVHLEHFAETLKGPRAGRSQRIEQAVNEFSRRLEH CCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH FALSEPLQWFNFYDFWRKDEEFQRADVQSSERCSSSSNTKGQASK HHHHCHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA