| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963703
Identifier: 157963703
GI number: 157963703
Start: 4738078
End: 4738464
Strand: Direct
Name: 157963703
Synonym: Spea_3892
Alternate gene names: NA
Gene position: 4738078-4738464 (Clockwise)
Preceding gene: 157963702
Following gene: 157963704
Centisome position: 91.56
GC content: 48.06
Gene sequence:
>387_bases ATGATTAGATCTAAATTGCCCCCTATCATCGACTGTAAAGATGACCAAGATTCAGTAACTTGGACCATAGAAATTGCCGC CGACCTTGATTTTTTCTCGGGGCACTTTCCAGAGCAGCCCGTGTTACCCGGCGTGACTCAACTCGACTGGGCAATTAAAC TTGGCTGCAAGCATTTCGGCTACCCCGTCAATGTCGCCACCCTTGAAGTACTCAAGTTTCAGCAACTTATGCTACCCAAT AGCCGAGTCGAGCTAACCATTAGCCACAATCCGGCTAAGGCTAAACTCATGTTTGCCTATAGCGATGGTGACAAACGTTT CGCATCGGGGCGTATCGCGCTCAATAGTGAAACAACCCAAGTTATCAACAGCGCGGATAGCAACTAA
Upstream 100 bases:
>100_bases GGCGCTGGCGCTATACAGAGCAGTTACCCGTGAACCCACAAGGTAAACGAGTGCAGGCCGACATGTTAGCCCTGTTTGAT ATCGATAAGTTTAAGAGCAA
Downstream 100 bases:
>100_bases TGCGTCTTGCCCTCGTTATCCCCAACTACAACCATGCTGGTGCCATCGAGCAGACTCTCGAACGCCTGGCAGCCTTCGAG CTTCCCTGCTACCTCATTAA
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Products: NA
Alternate protein names: Thioester Dehydrase Family Protein; Orphan Protein; AMP-(Fatty)Acid Ligase; Conserved Protein; (3R)-Hydroxymyristoyl-[Acyl Carrier Protein] Dehydratase; -Hydroxymyristoyl-ACP-Dehydratase
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MIRSKLPPIIDCKDDQDSVTWTIEIAADLDFFSGHFPEQPVLPGVTQLDWAIKLGCKHFGYPVNVATLEVLKFQQLMLPN SRVELTISHNPAKAKLMFAYSDGDKRFASGRIALNSETTQVINSADSN
Sequences:
>Translated_128_residues MIRSKLPPIIDCKDDQDSVTWTIEIAADLDFFSGHFPEQPVLPGVTQLDWAIKLGCKHFGYPVNVATLEVLKFQQLMLPN SRVELTISHNPAKAKLMFAYSDGDKRFASGRIALNSETTQVINSADSN >Mature_128_residues MIRSKLPPIIDCKDDQDSVTWTIEIAADLDFFSGHFPEQPVLPGVTQLDWAIKLGCKHFGYPVNVATLEVLKFQQLMLPN SRVELTISHNPAKAKLMFAYSDGDKRFASGRIALNSETTQVINSADSN
Specific function: Unknown
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14236; Mature: 14236
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSKLPPIIDCKDDQDSVTWTIEIAADLDFFSGHFPEQPVLPGVTQLDWAIKLGCKHFG CCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHHCC YPVNVATLEVLKFQQLMLPNSRVELTISHNPAKAKLMFAYSDGDKRFASGRIALNSETTQ CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCEEECCEEEECCCHHH VINSADSN HHHCCCCC >Mature Secondary Structure MIRSKLPPIIDCKDDQDSVTWTIEIAADLDFFSGHFPEQPVLPGVTQLDWAIKLGCKHFG CCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHHCC YPVNVATLEVLKFQQLMLPNSRVELTISHNPAKAKLMFAYSDGDKRFASGRIALNSETTQ CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCEEECCEEEECCCHHH VINSADSN HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA