| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963676
Identifier: 157963676
GI number: 157963676
Start: 4698856
End: 4699221
Strand: Direct
Name: 157963676
Synonym: Spea_3865
Alternate gene names: NA
Gene position: 4698856-4699221 (Clockwise)
Preceding gene: 157963675
Following gene: 157963678
Centisome position: 90.81
GC content: 42.35
Gene sequence:
>366_bases ATGGGGGTAATCGATTCCTTAAAGCTACAATATAAAATCGCCAAGGTTGCCAGTTGGATTGAAGACTACATAAGCGCTTC TCTTGAGATACACCCAAGGATTTTTGCTCAAGTATCTATCGGAACCGTTAGCAACTACATCGCCTCATCTGCTCGAGATT ATATCGACGAGGCCTACAGTGCCGATGTCGATATCGAGCCTTTTATCCATGTCTGTATGGGCAGCGCGATGTGCACCTTA AGCTGCAAAAGAAACGATGTACAAAATATTGTGATTTATGTTGTTAAGCAGGCTAATGCAAGGTGCCCTTTACTACAGCC TCTGATTGAATCAATCCCACAAAATAAAAGTACCAGCATGGTATAA
Upstream 100 bases:
>100_bases ATGCGCAGACTGACTTCTACTTAGGCTGGGGGTTATTGCTGAAAGATTACCTAGATGTGTTAGTCGAGTCTAACGGCGTC ATAGTGCAAGAGCGAACGCT
Downstream 100 bases:
>100_bases CAACACAGGGCCTAACGAAAACGGCTCTGTGTAATAAAACAAACTCAGCTGAGAGCTATTATCTAACAGGCAATCATGCC CTCTTTCTTATGCCGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MGVIDSLKLQYKIAKVASWIEDYISASLEIHPRIFAQVSIGTVSNYIASSARDYIDEAYSADVDIEPFIHVCMGSAMCTL SCKRNDVQNIVIYVVKQANARCPLLQPLIESIPQNKSTSMV
Sequences:
>Translated_121_residues MGVIDSLKLQYKIAKVASWIEDYISASLEIHPRIFAQVSIGTVSNYIASSARDYIDEAYSADVDIEPFIHVCMGSAMCTL SCKRNDVQNIVIYVVKQANARCPLLQPLIESIPQNKSTSMV >Mature_120_residues GVIDSLKLQYKIAKVASWIEDYISASLEIHPRIFAQVSIGTVSNYIASSARDYIDEAYSADVDIEPFIHVCMGSAMCTLS CKRNDVQNIVIYVVKQANARCPLLQPLIESIPQNKSTSMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13415; Mature: 13283
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIDSLKLQYKIAKVASWIEDYISASLEIHPRIFAQVSIGTVSNYIASSARDYIDEAYS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHC ADVDIEPFIHVCMGSAMCTLSCKRNDVQNIVIYVVKQANARCPLLQPLIESIPQNKSTSM CCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCC V C >Mature Secondary Structure GVIDSLKLQYKIAKVASWIEDYISASLEIHPRIFAQVSIGTVSNYIASSARDYIDEAYS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHC ADVDIEPFIHVCMGSAMCTLSCKRNDVQNIVIYVVKQANARCPLLQPLIESIPQNKSTSM CCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA