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The map label for this gene is ynfI [C]

Identifier: 157963675

GI number: 157963675

Start: 4698245

End: 4698865

Strand: Direct

Name: ynfI [C]

Synonym: Spea_3864

Alternate gene names: 157963675

Gene position: 4698245-4698865 (Clockwise)

Preceding gene: 157963674

Following gene: 157963676

Centisome position: 90.79

GC content: 44.61

Gene sequence:

>621_bases
ATGAATAGAACACTGGCTGAAATCACCCCCACCTTAGCTGCCAATATGTACCATGATCCCAGCGATAAGATGCTAGAGGT
CTATAAAGAGCATGACTTCAACGCATGTTACCCTCTGCTAACAGAGAGCCAGACCCGCAGCGAAGGCGTTGCACTAATTA
GCAACTACATCACTCAATACACCAGTGAACAATTTCCAGCTCTATTATTGGATTTTAATCAGTTATTTATAGGCCCTGGT
AAAATGAAGGTTCCATTATGGGGCTCATATTACTTGAGTGAAGATAACCTGCTGTGTGGGCCAAGCACACAGAAACTCCA
AGAACGCATCGATGCACTAGGTATAAAACTCAGTACCTCAGATGGTGATAATCAGCCCGTCGACCACATATCTTTGGTGC
TACAACTGGTGGAATTTACCCTTAATGAAGGGAAAACATTAGAGCTTAAAGTTATCGTAGGGGAGCATCTAGCGGTTTGG
GGATATAGAATCGCCGAGCTCATCATTGAACATGCGCAGACTGACTTCTACTTAGGCTGGGGGTTATTGCTGAAAGATTA
CCTAGATGTGTTAGTCGAGTCTAACGGCGTCATAGTGCAAGAGCGAACGCTATGGGGGTAA

Upstream 100 bases:

>100_bases
TTCTGGACTAGAGTTCTACCAATATGAGCCTAGCTTAGACAAGTAGGTATATCGTTTAAGGCGGCCTCTGGCCGCCTTTT
CTTTTTATTTCGGAGTTTAT

Downstream 100 bases:

>100_bases
TCGATTCCTTAAAGCTACAATATAAAATCGCCAAGGTTGCCAGTTGGATTGAAGACTACATAAGCGCTTCTCTTGAGATA
CACCCAAGGATTTTTGCTCA

Product: cytoplasmic chaperone TorD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNRTLAEITPTLAANMYHDPSDKMLEVYKEHDFNACYPLLTESQTRSEGVALISNYITQYTSEQFPALLLDFNQLFIGPG
KMKVPLWGSYYLSEDNLLCGPSTQKLQERIDALGIKLSTSDGDNQPVDHISLVLQLVEFTLNEGKTLELKVIVGEHLAVW
GYRIAELIIEHAQTDFYLGWGLLLKDYLDVLVESNGVIVQERTLWG

Sequences:

>Translated_206_residues
MNRTLAEITPTLAANMYHDPSDKMLEVYKEHDFNACYPLLTESQTRSEGVALISNYITQYTSEQFPALLLDFNQLFIGPG
KMKVPLWGSYYLSEDNLLCGPSTQKLQERIDALGIKLSTSDGDNQPVDHISLVLQLVEFTLNEGKTLELKVIVGEHLAVW
GYRIAELIIEHAQTDFYLGWGLLLKDYLDVLVESNGVIVQERTLWG
>Mature_206_residues
MNRTLAEITPTLAANMYHDPSDKMLEVYKEHDFNACYPLLTESQTRSEGVALISNYITQYTSEQFPALLLDFNQLFIGPG
KMKVPLWGSYYLSEDNLLCGPSTQKLQERIDALGIKLSTSDGDNQPVDHISLVLQLVEFTLNEGKTLELKVIVGEHLAVW
GYRIAELIIEHAQTDFYLGWGLLLKDYLDVLVESNGVIVQERTLWG

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. DmsD subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081942, Length=114, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 23298; Mature: 23298

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTLAEITPTLAANMYHDPSDKMLEVYKEHDFNACYPLLTESQTRSEGVALISNYITQY
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
TSEQFPALLLDFNQLFIGPGKMKVPLWGSYYLSEDNLLCGPSTQKLQERIDALGIKLSTS
CCCCCCCCEEECHHHEECCCCEEEEECCEEEECCCCEEECCCHHHHHHHHHHHCEEEECC
DGDNQPVDHISLVLQLVEFTLNEGKTLELKVIVGEHLAVWGYRIAELIIEHAQTDFYLGW
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHH
GLLLKDYLDVLVESNGVIVQERTLWG
HHHHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MNRTLAEITPTLAANMYHDPSDKMLEVYKEHDFNACYPLLTESQTRSEGVALISNYITQY
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
TSEQFPALLLDFNQLFIGPGKMKVPLWGSYYLSEDNLLCGPSTQKLQERIDALGIKLSTS
CCCCCCCCEEECHHHEECCCCEEEEECCEEEECCCCEEECCCHHHHHHHHHHHCEEEECC
DGDNQPVDHISLVLQLVEFTLNEGKTLELKVIVGEHLAVWGYRIAELIIEHAQTDFYLGW
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHH
GLLLKDYLDVLVESNGVIVQERTLWG
HHHHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]