| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963674
Identifier: 157963674
GI number: 157963674
Start: 4696103
End: 4698190
Strand: Direct
Name: 157963674
Synonym: Spea_3863
Alternate gene names: NA
Gene position: 4696103-4698190 (Clockwise)
Preceding gene: 157963673
Following gene: 157963675
Centisome position: 90.75
GC content: 47.17
Gene sequence:
>2088_bases ATGAATACTAAACTTTCTCTTGTAGCTATCCTTCTTGCTGGTGCTATGGTAACTGGCTGTTCTGATGACGATTCAGAAAC AATATATATCTGTGAAGATGGCTCTGAAGCCTCATCTCCAGAACTGTGCCCAGTAACAGAGCCTAGCGATCCTACGGATC CAGTTGAACCACCAGCAGTCGATGGACCATTCGTGCATGCTGGCCGTACTATCATTGATGGCGCATTCTATAGCGCCACC AGCCCGAGTAACGAATATGATCCGTTACGTGATTGGGAAAATACCATGCCAGCTGGATATAAAGAGATGCGTAACGCTTC GTATCCTTGGGGCACGACTGTTTATGATTCAGCAGACAATGGCGAAGAATTGTGGATGGGTACTATCTCAAACGGTTGGT GTGTATGGCCATACCAGAACATCGGCATGCCTATCGAGTTAACCACTTATGAGAGTGAGACTACTGGCTGTTCAGTGCCA GGGACTACTGGCACTCCATCACAGATCTTCATCTATAACTTCCGCACTGGTGCAAAAGAAGTGATTCATGAAGGCATGCT CACATCTGGTGGCCCTCAGTTTACTGAAGCTTTCGAGCCTATCAATAATACCTATGGCTTCCGCGCTGCGGGCACTGTTG GTGATCTGGTATTTGTTGCGGGTCACTACAAGAGTGGTGTCGATGCTAACCAAGGTCGACTACGGCTATTCGTATTCAAT GCAAAGGAGCGTTCATTCGTCGGCTATCGTGATATCGTCGGTGATACCACACGTCGCTTCCGTACTCTAGAGCACGCTGA CGGTACCACTGGCTTCTACACTATCGTAGGGGCAGAAACAGGTATGACTCAGACTGGTGACGGCCCAACTCAACTACTTC GCTGGGTAGGTACACAAGATGATCCTTTCGCTGGCGGTACAATTAAAGATGTAGAGAACCCACTTAACACCACAGGTTGG AGCAAGGTTTCGACTCAACTGGATAATGAAGAAACTCCAGGTGGCGTACAATACGGTATGATCGGTGACTGGCGTCAATT CACCCATAGCGATGGTACTGAACGCCTTATCATGTCTGCTTCTGCACACCCTTTCGTTTACAAGGAAGGCAAGCGTAATG ATAAGTACAAAGAGTCAGTCATCCTGATTTCAGATCCAATTCCAGCTGCAGGTTACAGCGCAAGTGAGCAACTGACCTTC CGTGAAGTATTCGGTATGGATCAGTACGATCCTGATACTAAAGGTCGCTGGGGAGCTAAATGGGGGACGAGTGCAATTAA CGACGGTTTCATGTATTTCGGTACTTACCACCAAGGTACAGATGCTGCTTATAAGCACTTTGCTAAGGCAGATCCTGAGT TATTCACCGACTTAACAGGTCTTGATGCACATGATTACTCAGTCATTGATGCAAATAAAGAAGCGGGTCATAAAACGTTT ATGATCAACGAGTGGCGCGCCACTTCAATCTTCCGTATTGACCTTAAAAATATTGATGCGGTAAGCGCAGGCGACACCTC TAAAGTAGAGCTGCTTTACGGCTACGAAACCATGCAGGTTAATGATGGTAATGGTTGGAAGGCTATGCCAAACAAGTTAG GTCAGAAGCCTATTCATGGTGAAGCTGGTATGGGTAACCCAGGAAACGTCTACTCTTGGACCTCAATTGCCAAAGACGGT AAGTTATTCTGGGGATTCTTCGATGCATTCTCTGGCCTACATGACCTACTGTTCGAGGCATACGCTGGTGAGTACATGTT ATTCGACGGTATCGTATTCCAGAACCCTGAGTGGAAGAACCAGATGGCTAACAACCCAGCCATGTGGATGTACGATTACG CTAAAACTGAGATGGATGCTAACGGCTTAGCCGAAGAGTTTATTCCAGGTGGCGATCTACTGATGATCGAAGCTGACGGT TCTGCACGTAAGCTTACCACTAACGGTTTCGGCAATGAGTGCTCTAACGGTATCCGTAACGTAGTCGATATCGACGACAA GCTATACTTCGGCACCTCAACTTGGTGTAACGTCGGTCCAACTTCTGGACTAGAGTTCTACCAATATGAGCCTAGCTTAG ACAAGTAG
Upstream 100 bases:
>100_bases GCAAGCATCACCAAACCAAACTTAATTCTTAAAGTACACCCTGACGGTCAACCTGTAGGTTCAGGCGCCGGTTCAGTAGT AAATCCAAACGAGGTATAAC
Downstream 100 bases:
>100_bases GTATATCGTTTAAGGCGGCCTCTGGCCGCCTTTTCTTTTTATTTCGGAGTTTATATGAATAGAACACTGGCTGAAATCAC CCCCACCTTAGCTGCCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MNTKLSLVAILLAGAMVTGCSDDDSETIYICEDGSEASSPELCPVTEPSDPTDPVEPPAVDGPFVHAGRTIIDGAFYSAT SPSNEYDPLRDWENTMPAGYKEMRNASYPWGTTVYDSADNGEELWMGTISNGWCVWPYQNIGMPIELTTYESETTGCSVP GTTGTPSQIFIYNFRTGAKEVIHEGMLTSGGPQFTEAFEPINNTYGFRAAGTVGDLVFVAGHYKSGVDANQGRLRLFVFN AKERSFVGYRDIVGDTTRRFRTLEHADGTTGFYTIVGAETGMTQTGDGPTQLLRWVGTQDDPFAGGTIKDVENPLNTTGW SKVSTQLDNEETPGGVQYGMIGDWRQFTHSDGTERLIMSASAHPFVYKEGKRNDKYKESVILISDPIPAAGYSASEQLTF REVFGMDQYDPDTKGRWGAKWGTSAINDGFMYFGTYHQGTDAAYKHFAKADPELFTDLTGLDAHDYSVIDANKEAGHKTF MINEWRATSIFRIDLKNIDAVSAGDTSKVELLYGYETMQVNDGNGWKAMPNKLGQKPIHGEAGMGNPGNVYSWTSIAKDG KLFWGFFDAFSGLHDLLFEAYAGEYMLFDGIVFQNPEWKNQMANNPAMWMYDYAKTEMDANGLAEEFIPGGDLLMIEADG SARKLTTNGFGNECSNGIRNVVDIDDKLYFGTSTWCNVGPTSGLEFYQYEPSLDK
Sequences:
>Translated_695_residues MNTKLSLVAILLAGAMVTGCSDDDSETIYICEDGSEASSPELCPVTEPSDPTDPVEPPAVDGPFVHAGRTIIDGAFYSAT SPSNEYDPLRDWENTMPAGYKEMRNASYPWGTTVYDSADNGEELWMGTISNGWCVWPYQNIGMPIELTTYESETTGCSVP GTTGTPSQIFIYNFRTGAKEVIHEGMLTSGGPQFTEAFEPINNTYGFRAAGTVGDLVFVAGHYKSGVDANQGRLRLFVFN AKERSFVGYRDIVGDTTRRFRTLEHADGTTGFYTIVGAETGMTQTGDGPTQLLRWVGTQDDPFAGGTIKDVENPLNTTGW SKVSTQLDNEETPGGVQYGMIGDWRQFTHSDGTERLIMSASAHPFVYKEGKRNDKYKESVILISDPIPAAGYSASEQLTF REVFGMDQYDPDTKGRWGAKWGTSAINDGFMYFGTYHQGTDAAYKHFAKADPELFTDLTGLDAHDYSVIDANKEAGHKTF MINEWRATSIFRIDLKNIDAVSAGDTSKVELLYGYETMQVNDGNGWKAMPNKLGQKPIHGEAGMGNPGNVYSWTSIAKDG KLFWGFFDAFSGLHDLLFEAYAGEYMLFDGIVFQNPEWKNQMANNPAMWMYDYAKTEMDANGLAEEFIPGGDLLMIEADG SARKLTTNGFGNECSNGIRNVVDIDDKLYFGTSTWCNVGPTSGLEFYQYEPSLDK >Mature_695_residues MNTKLSLVAILLAGAMVTGCSDDDSETIYICEDGSEASSPELCPVTEPSDPTDPVEPPAVDGPFVHAGRTIIDGAFYSAT SPSNEYDPLRDWENTMPAGYKEMRNASYPWGTTVYDSADNGEELWMGTISNGWCVWPYQNIGMPIELTTYESETTGCSVP GTTGTPSQIFIYNFRTGAKEVIHEGMLTSGGPQFTEAFEPINNTYGFRAAGTVGDLVFVAGHYKSGVDANQGRLRLFVFN AKERSFVGYRDIVGDTTRRFRTLEHADGTTGFYTIVGAETGMTQTGDGPTQLLRWVGTQDDPFAGGTIKDVENPLNTTGW SKVSTQLDNEETPGGVQYGMIGDWRQFTHSDGTERLIMSASAHPFVYKEGKRNDKYKESVILISDPIPAAGYSASEQLTF REVFGMDQYDPDTKGRWGAKWGTSAINDGFMYFGTYHQGTDAAYKHFAKADPELFTDLTGLDAHDYSVIDANKEAGHKTF MINEWRATSIFRIDLKNIDAVSAGDTSKVELLYGYETMQVNDGNGWKAMPNKLGQKPIHGEAGMGNPGNVYSWTSIAKDG KLFWGFFDAFSGLHDLLFEAYAGEYMLFDGIVFQNPEWKNQMANNPAMWMYDYAKTEMDANGLAEEFIPGGDLLMIEADG SARKLTTNGFGNECSNGIRNVVDIDDKLYFGTSTWCNVGPTSGLEFYQYEPSLDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76529; Mature: 76529
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKLSLVAILLAGAMVTGCSDDDSETIYICEDGSEASSPELCPVTEPSDPTDPVEPPAV CCCHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGPFVHAGRTIIDGAFYSATSPSNEYDPLRDWENTMPAGYKEMRNASYPWGTTVYDSADN CCCEEECCCEEECCCEECCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCC GEELWMGTISNGWCVWPYQNIGMPIELTTYESETTGCSVPGTTGTPSQIFIYNFRTGAKE CCEEEEEECCCCEEECCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHH VIHEGMLTSGGPQFTEAFEPINNTYGFRAAGTVGDLVFVAGHYKSGVDANQGRLRLFVFN HHHCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEC AKERSFVGYRDIVGDTTRRFRTLEHADGTTGFYTIVGAETGMTQTGDGPTQLLRWVGTQD CCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCC DPFAGGTIKDVENPLNTTGWSKVSTQLDNEETPGGVQYGMIGDWRQFTHSDGTERLIMSA CCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCHHHHHCCCCCCEEEEEC SAHPFVYKEGKRNDKYKESVILISDPIPAAGYSASEQLTFREVFGMDQYDPDTKGRWGAK CCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCC WGTSAINDGFMYFGTYHQGTDAAYKHFAKADPELFTDLTGLDAHDYSVIDANKEAGHKTF CCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCEEE MINEWRATSIFRIDLKNIDAVSAGDTSKVELLYGYETMQVNDGNGWKAMPNKLGQKPIHG EEECCCCCEEEEEECCCCCEECCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHCCCCCCC EAGMGNPGNVYSWTSIAKDGKLFWGFFDAFSGLHDLLFEAYAGEYMLFDGIVFQNPEWKN CCCCCCCCCEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCHHH QMANNPAMWMYDYAKTEMDANGLAEEFIPGGDLLMIEADGSARKLTTNGFGNECSNGIRN HHCCCCCEEEEEHHHCCCCCCCCHHHHCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHH VVDIDDKLYFGTSTWCNVGPTSGLEFYQYEPSLDK EEECCCEEEECCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MNTKLSLVAILLAGAMVTGCSDDDSETIYICEDGSEASSPELCPVTEPSDPTDPVEPPAV CCCHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGPFVHAGRTIIDGAFYSATSPSNEYDPLRDWENTMPAGYKEMRNASYPWGTTVYDSADN CCCEEECCCEEECCCEECCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCC GEELWMGTISNGWCVWPYQNIGMPIELTTYESETTGCSVPGTTGTPSQIFIYNFRTGAKE CCEEEEEECCCCEEECCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHH VIHEGMLTSGGPQFTEAFEPINNTYGFRAAGTVGDLVFVAGHYKSGVDANQGRLRLFVFN HHHCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEC AKERSFVGYRDIVGDTTRRFRTLEHADGTTGFYTIVGAETGMTQTGDGPTQLLRWVGTQD CCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCC DPFAGGTIKDVENPLNTTGWSKVSTQLDNEETPGGVQYGMIGDWRQFTHSDGTERLIMSA CCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCHHHHHCCCCCCEEEEEC SAHPFVYKEGKRNDKYKESVILISDPIPAAGYSASEQLTFREVFGMDQYDPDTKGRWGAK CCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCC WGTSAINDGFMYFGTYHQGTDAAYKHFAKADPELFTDLTGLDAHDYSVIDANKEAGHKTF CCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCEEE MINEWRATSIFRIDLKNIDAVSAGDTSKVELLYGYETMQVNDGNGWKAMPNKLGQKPIHG EEECCCCCEEEEEECCCCCEECCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHCCCCCCC EAGMGNPGNVYSWTSIAKDGKLFWGFFDAFSGLHDLLFEAYAGEYMLFDGIVFQNPEWKN CCCCCCCCCEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCHHH QMANNPAMWMYDYAKTEMDANGLAEEFIPGGDLLMIEADGSARKLTTNGFGNECSNGIRN HHCCCCCEEEEEHHHCCCCCCCCHHHHCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHH VVDIDDKLYFGTSTWCNVGPTSGLEFYQYEPSLDK EEECCCEEEECCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA