Click here to switch to the map view.

The map label for this gene is fadL [C]

Identifier: 157963635

GI number: 157963635

Start: 4648523

End: 4649809

Strand: Reverse

Name: fadL [C]

Synonym: Spea_3824

Alternate gene names: 157963635

Gene position: 4649809-4648523 (Counterclockwise)

Preceding gene: 157963636

Following gene: 157963634

Centisome position: 89.86

GC content: 45.53

Gene sequence:

>1287_bases
ATGAATAAGCGTTTAATAACTCTTGCTGTTAGTACGGCACTTTTGGGGACAGTTACACAGGTTCAAGCTGCTGGTTTTCA
ATTAGCTGAATACTCTGCAACTGGTTTAGGTCGTGCGTATGCTGGTGAAGCAGCCATGGCCGATAACGCTGCGGCGCAAT
TTCGTAATCCAGCTATGCTGACTTATCTCGAAGGCACGCAAATGACAACTGGCGCAATTTTGGTTATGCCGAATATTGAT
GTTGACGGCACGGTGAGTTTTGCGGGTCAATCAACTCCGTCATCAGCAAAAGATATTGCTGGCGACGCGGTAGTACCTAA
CTTTTATGTGTCACACCAGTTAAACGACCAATGGTTCCTAGGTTTAGCGCTTGGTAGCAACTTTGGTATGGCAACTGAAT
TAGATGATAGCTTCCTTGGTACTCAGTTTGGTAATGAAGCATCAATTACCGCTATTGAAGTAAACCCAAATGTGGCTTAC
CGCATTAATGACCAGTTTAGCGTCGGTGCGGGTGTTCGTTTGGTGTTAGGGGAAGGTAGCTTTGGTGCACAAGCGCCAAC
ATCAGTTGGTCCTCTGCAAGGTACCACCCTTAAGTACATGGAAGGTGATGATATCTCTTGGGGTTGGCAGTTAGGCGGTG
CGTGGCAGATCAATGCTAATAACCGTATCGGCTTTAACTATCGCTCAGAAGTCGACCAAAATCTTGAAGGCGAAGCGAGA
GGCCTAGGTTTTGATTTCGCAATGATCGCTCAAGGTAAAGCGCCTTCTAGCCATTACGATGGTGCAATGGAATTAGCGCT
ACCAGCAACAGCAGAAATTGCTAGCTTCCATCAATTGACCGACAAACTTGCTATTCATGCGAGTGTTAACTGGACGGATT
GGAGCTCATTTGAAAAGCTTGAAGCAATGATCCCTGAGATCTCAGCAGACCCAATCTTAGTGAAGCAAGAAAATTGGGAA
GACAACTACCGCTTTGCAGTAGGTGCGACTTACCAGTTATCACAAAAATCAACGCTAAGAACCGGTATTGCTTATGACCA
AGCTGCAGTGTCTGATGCTAACCGTACAACCACTATTCCTGAAGTTGATCGTTTATGGTTGAGCGTGGGTTATGGTTACC
AGTACAGTGACAACCTAGATTTTGATTTTGGCGCAACTTACATCTTTGCTGATGAGTCTCCAATCCATGAGCATGACGAA
GATTCTGCTATGTTTGGTGGTACTTTCGAAGGTCAAGTTAGCGGCAACATCATTCTAGTTGGTGTTCAGGCGACTTACCG
CTTCTAA

Upstream 100 bases:

>100_bases
TTATAAAGTACTTGAAAAGATATTCTGCAGTTGTAAAATCGCCGCCATTAAAAAGTGGAGTTAATACTCTACTTCTTGTT
AACATAATTAGAGATTACCA

Downstream 100 bases:

>100_bases
ACTTAGTGCTAGGGTATGGGGCTAACCTTAGCTAAAGCTAAGCTGTTTCAGCCTTAACTGTTATTAAAGCCTCGCATCTG
CGGGGCTTTTTTGTACAGGA

Product: aromatic hydrocarbon degradation membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MNKRLITLAVSTALLGTVTQVQAAGFQLAEYSATGLGRAYAGEAAMADNAAAQFRNPAMLTYLEGTQMTTGAILVMPNID
VDGTVSFAGQSTPSSAKDIAGDAVVPNFYVSHQLNDQWFLGLALGSNFGMATELDDSFLGTQFGNEASITAIEVNPNVAY
RINDQFSVGAGVRLVLGEGSFGAQAPTSVGPLQGTTLKYMEGDDISWGWQLGGAWQINANNRIGFNYRSEVDQNLEGEAR
GLGFDFAMIAQGKAPSSHYDGAMELALPATAEIASFHQLTDKLAIHASVNWTDWSSFEKLEAMIPEISADPILVKQENWE
DNYRFAVGATYQLSQKSTLRTGIAYDQAAVSDANRTTTIPEVDRLWLSVGYGYQYSDNLDFDFGATYIFADESPIHEHDE
DSAMFGGTFEGQVSGNIILVGVQATYRF

Sequences:

>Translated_428_residues
MNKRLITLAVSTALLGTVTQVQAAGFQLAEYSATGLGRAYAGEAAMADNAAAQFRNPAMLTYLEGTQMTTGAILVMPNID
VDGTVSFAGQSTPSSAKDIAGDAVVPNFYVSHQLNDQWFLGLALGSNFGMATELDDSFLGTQFGNEASITAIEVNPNVAY
RINDQFSVGAGVRLVLGEGSFGAQAPTSVGPLQGTTLKYMEGDDISWGWQLGGAWQINANNRIGFNYRSEVDQNLEGEAR
GLGFDFAMIAQGKAPSSHYDGAMELALPATAEIASFHQLTDKLAIHASVNWTDWSSFEKLEAMIPEISADPILVKQENWE
DNYRFAVGATYQLSQKSTLRTGIAYDQAAVSDANRTTTIPEVDRLWLSVGYGYQYSDNLDFDFGATYIFADESPIHEHDE
DSAMFGGTFEGQVSGNIILVGVQATYRF
>Mature_428_residues
MNKRLITLAVSTALLGTVTQVQAAGFQLAEYSATGLGRAYAGEAAMADNAAAQFRNPAMLTYLEGTQMTTGAILVMPNID
VDGTVSFAGQSTPSSAKDIAGDAVVPNFYVSHQLNDQWFLGLALGSNFGMATELDDSFLGTQFGNEASITAIEVNPNVAY
RINDQFSVGAGVRLVLGEGSFGAQAPTSVGPLQGTTLKYMEGDDISWGWQLGGAWQINANNRIGFNYRSEVDQNLEGEAR
GLGFDFAMIAQGKAPSSHYDGAMELALPATAEIASFHQLTDKLAIHASVNWTDWSSFEKLEAMIPEISADPILVKQENWE
DNYRFAVGATYQLSQKSTLRTGIAYDQAAVSDANRTTTIPEVDRLWLSVGYGYQYSDNLDFDFGATYIFADESPIHEHDE
DSAMFGGTFEGQVSGNIILVGVQATYRF

Specific function: Involved In Translocation Of Long-Chain Fatty Acids Across The Outer Membrane. It Is A Receptor For The Bacteriophage T2. FADl May Form A Specific Channel. [C]

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ompP1/fadL family [H]

Homologues:

Organism=Escherichia coli, GI145693163, Length=462, Percent_Identity=33.1168831168831, Blast_Score=225, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005017 [H]

Pfam domain/function: PF03349 Toluene_X [H]

EC number: NA

Molecular weight: Translated: 46127; Mature: 46127

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRLITLAVSTALLGTVTQVQAAGFQLAEYSATGLGRAYAGEAAMADNAAAQFRNPAML
CCCEEEEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCHHCCCCHHHHCCCEEE
TYLEGTQMTTGAILVMPNIDVDGTVSFAGQSTPSSAKDIAGDAVVPNFYVSHQLNDQWFL
EEECCCCEECCEEEEEECCCCCCEEEECCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEE
GLALGSNFGMATELDDSFLGTQFGNEASITAIEVNPNVAYRINDQFSVGAGVRLVLGEGS
EEEECCCCCCEECCCCCHHCCCCCCCCEEEEEEECCCEEEEECCCEECCCCEEEEEECCC
FGAQAPTSVGPLQGTTLKYMEGDDISWGWQLGGAWQINANNRIGFNYRSEVDQNLEGEAR
CCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEECCCCEECCCCHHHCCCCCCCCCC
GLGFDFAMIAQGKAPSSHYDGAMELALPATAEIASFHQLTDKLAIHASVNWTDWSSFEKL
CCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHH
EAMIPEISADPILVKQENWEDNYRFAVGATYQLSQKSTLRTGIAYDQAAVSDANRTTTIP
HHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCHHHHCCCCCHHHHCCCCCCCCCC
EVDRLWLSVGYGYQYSDNLDFDFGATYIFADESPIHEHDEDSAMFGGTFEGQVSGNIILV
CHHEEEEEECCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEECCEEECEECCCEEEE
GVQATYRF
EEEEEECC
>Mature Secondary Structure
MNKRLITLAVSTALLGTVTQVQAAGFQLAEYSATGLGRAYAGEAAMADNAAAQFRNPAML
CCCEEEEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCHHCCCCHHHHCCCEEE
TYLEGTQMTTGAILVMPNIDVDGTVSFAGQSTPSSAKDIAGDAVVPNFYVSHQLNDQWFL
EEECCCCEECCEEEEEECCCCCCEEEECCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEE
GLALGSNFGMATELDDSFLGTQFGNEASITAIEVNPNVAYRINDQFSVGAGVRLVLGEGS
EEEECCCCCCEECCCCCHHCCCCCCCCEEEEEEECCCEEEEECCCEECCCCEEEEEECCC
FGAQAPTSVGPLQGTTLKYMEGDDISWGWQLGGAWQINANNRIGFNYRSEVDQNLEGEAR
CCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEECCCCEECCCCHHHCCCCCCCCCC
GLGFDFAMIAQGKAPSSHYDGAMELALPATAEIASFHQLTDKLAIHASVNWTDWSSFEKL
CCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHH
EAMIPEISADPILVKQENWEDNYRFAVGATYQLSQKSTLRTGIAYDQAAVSDANRTTTIP
HHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCHHHHCCCCCHHHHCCCCCCCCCC
EVDRLWLSVGYGYQYSDNLDFDFGATYIFADESPIHEHDEDSAMFGGTFEGQVSGNIILV
CHHEEEEEECCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEECCEEECEECCCEEEE
GVQATYRF
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]