| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963634
Identifier: 157963634
GI number: 157963634
Start: 4647380
End: 4647913
Strand: Reverse
Name: 157963634
Synonym: Spea_3823
Alternate gene names: NA
Gene position: 4647913-4647380 (Counterclockwise)
Preceding gene: 157963635
Following gene: 157963633
Centisome position: 89.82
GC content: 44.01
Gene sequence:
>534_bases ATGAAACCCAAAATTTGGTTACTCGCTATTGGTTCGGTATTTTTAACTCTATTACCATCGGCCTATGCTGCAGAGCCGCA ACCGCTCGAAGACCAGCCAAAATCTGTGCTGGTGGTGAAGCAGTTTATTCAAGGTTTTAATAACCATAGTGTAGAGCAGT TATTACAGCATACGACGCCAAACGTGCACTGGTTTAATTTAACAGGTACCAAGATGGATATTGAAACATCCACTCAGCAA GAGCTTGGCGCTGCGATGACCGATTACTTTGCTAGTCTCACTGATGCCAAGGCCAAATTAAGGCAGATCTTGGTTTCGGC TAATTACGTGAGTACGGTCGAAGAAGTGACTTGGAGTCATGATGGTGAGCGACATAGTCAATGTAGCCTAGGTATTTATC AGCTAGCGGGCGATAAAATTAATGCGGTATGGTATTACCCTAGCCACGCCTGTGATGTGACGCCTTGGGTTGAAGTGGTA AGCCCTGAAATTGTTCAACCAGAAATTGGTTTATTAAAAGAAACGCGCCAATAA
Upstream 100 bases:
>100_bases TCGTGGTAAAAAAGGATAACGGCTTAGGTAATAAGACCTCCTTGCTGTGTACACTTCTATCCATTCACCCTAAAGCATCA AAATAAATAAGAGGTTCACC
Downstream 100 bases:
>100_bases GGAAAGCAAAAAGTGTCAAAGAAATACATCATAGCACTGGACCAAGGGACAACGAGCTCCCGAGCGATAGTGTTCGATCA TGATACCAAGATGGTTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKPKIWLLAIGSVFLTLLPSAYAAEPQPLEDQPKSVLVVKQFIQGFNNHSVEQLLQHTTPNVHWFNLTGTKMDIETSTQQ ELGAAMTDYFASLTDAKAKLRQILVSANYVSTVEEVTWSHDGERHSQCSLGIYQLAGDKINAVWYYPSHACDVTPWVEVV SPEIVQPEIGLLKETRQ
Sequences:
>Translated_177_residues MKPKIWLLAIGSVFLTLLPSAYAAEPQPLEDQPKSVLVVKQFIQGFNNHSVEQLLQHTTPNVHWFNLTGTKMDIETSTQQ ELGAAMTDYFASLTDAKAKLRQILVSANYVSTVEEVTWSHDGERHSQCSLGIYQLAGDKINAVWYYPSHACDVTPWVEVV SPEIVQPEIGLLKETRQ >Mature_177_residues MKPKIWLLAIGSVFLTLLPSAYAAEPQPLEDQPKSVLVVKQFIQGFNNHSVEQLLQHTTPNVHWFNLTGTKMDIETSTQQ ELGAAMTDYFASLTDAKAKLRQILVSANYVSTVEEVTWSHDGERHSQCSLGIYQLAGDKINAVWYYPSHACDVTPWVEVV SPEIVQPEIGLLKETRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19854; Mature: 19854
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKIWLLAIGSVFLTLLPSAYAAEPQPLEDQPKSVLVVKQFIQGFNNHSVEQLLQHTTP CCCCEEEEHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC NVHWFNLTGTKMDIETSTQQELGAAMTDYFASLTDAKAKLRQILVSANYVSTVEEVTWSH CEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC DGERHSQCSLGIYQLAGDKINAVWYYPSHACDVTPWVEVVSPEIVQPEIGLLKETRQ CCCCCCHHCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKPKIWLLAIGSVFLTLLPSAYAAEPQPLEDQPKSVLVVKQFIQGFNNHSVEQLLQHTTP CCCCEEEEHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC NVHWFNLTGTKMDIETSTQQELGAAMTDYFASLTDAKAKLRQILVSANYVSTVEEVTWSH CEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC DGERHSQCSLGIYQLAGDKINAVWYYPSHACDVTPWVEVVSPEIVQPEIGLLKETRQ CCCCCCHHCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA