Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is yoaE [H]

Identifier: 157963475

GI number: 157963475

Start: 4455524

End: 4457056

Strand: Reverse

Name: yoaE [H]

Synonym: Spea_3663

Alternate gene names: 157963475

Gene position: 4457056-4455524 (Counterclockwise)

Preceding gene: 157963476

Following gene: 157963473

Centisome position: 86.13

GC content: 43.9

Gene sequence:

>1533_bases
ATGGAATTTTTGCTTGAACCCCAAATATGGATTGGTTTAATTACCCTGATTATTATCGAGATCGTACTCGGTATTGATAA
CCTTGTCTTTATTGCCATTTTAGTTAAAAAACTCCCTCCCGAGCAAAGAGACAAAGCAAGAACTATCGGTTTATCTCTCG
CACTCATAATGCGATTAGGTCTGCTGAGCATAGTGTCTTGGCTAGTCACGCTGACACAGCCCTTGTTTAGTATCTATGAC
CTCAGCTTCTCGACTCGAGACCTGATTTTAATTACCGGTGGTTTGTTCCTGCTATTTAAGGCGACTCATGAGCTGCATGA
ACGTTTTGAAGGGGAGGCTAATCAGCAGCAAGGCGCCAATGTTTACGCAAGTTTTGGTGTGATCATCGCGCAGATCCTTG
CCTTAGACGCAGTGTTCTCTCTCGATTCGATCATTACCGCAGTGGGTATGGTAGATAGCTTAACTGTGATGATGATTGCC
GTTATCGTGTCTATGATTGTGATGCTGTTAGCGTCGAAGTCGATCACTAACTTCGTCAACGCGCATCCTACGGTTATCGT
ATTGTGTCTAAGCTTCCTATTGATGATTGGCTTTATTCTGGTTGCAGAAGGTTTTGGCTTACATATTCCTAAAGGCTACT
TGTATGCGGCGATTGGTTTCTCAATTTTAATTGAGATGTTTAATCAAATGATCAGCTCAAGCCATGCTAAAAATGCTGAA
CGAGTACCACTGCGTCAGCGCACGACTGAAGCCATCTTTCGTTTAATGGGTAATAAACATTACAACATCCATGATGACGA
CGATGGTAGTGAGCCTGCGCCAGTGAGCTTTGGTGATGCCGAGCGTGAAATGGTTACAGGAGTTTTATCATTGTCTGAGC
GTAATGTTCGCACTGTGATGACCCAAAGAAGTGAGACGGTTTGGTTAAATACTGAAGATTGCACCGATAAAATCAAGCAA
ACAATTAAGAATAGCCGCCACCAAAATTTCCCTGTGTGCACTGGTTCTCTGGATAACTTAGTCGGTATTGTACGCAGTAA
AGACTTACTATTAGGCATTGAGGCCGGGGAAGACTTAGCGTCTATTGCGGCAGCTTTCCCTGCCTATATCGTGCCCGATA
GTATTAATGTGATCCGTTTACTCGATGGCTTTAGAGAGTCAAGAGCGGGCATGGCTGTGCTGGCGGACGAGTTCGGTAGT
ATTCAGGGTATTGTCACCTTACATGACTTACTCGAGTCTATCGTGGGCGAGTTCCCGGATATTGGTGAGACCCCAGAGAT
CAGTGTGTGTAATGACGGTTGGTTGGTTAAAGGCAGTACCTCATTGCATGACTTGGAGTCGCGCCTTGAAACACTAGGGC
TAATCGATAAGCAGCAGGAGTACATTACCGTGGCTGGCTTATTATTAACCTTGAACTCAACGATTCCTAAAGTCAGTGAT
GTGATTGAATTTGCCAAGCTGAAGTTTGAAATCGTTGAAGCTGACGAATTTAAAGTGTCCTTAGTTAAGGTTAGTCATCT
ACCAGTAAATTAA

Upstream 100 bases:

>100_bases
TCCAATATAAATGCGCTTAACTTTTATAAACGCGTTATATTTTGGAGCTATTGACCGAACTGGTGTTTAGACATCGGCTT
TGGGAAAATGAAAACACACG

Downstream 100 bases:

>100_bases
TTGGTTTGGAACAAAGAAAAGGGTCTGCATTGCAGACCCTTTTTTTATGCGGCTAAGGCTTATCTCAACTAGAGCATCAC
AAGGTAAGTGATAAAGATCA

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLGLLSIVSWLVTLTQPLFSIYD
LSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGANVYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIA
VIVSMIVMLLASKSITNFVNAHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE
RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVMTQRSETVWLNTEDCTDKIKQ
TIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLASIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGS
IQGIVTLHDLLESIVGEFPDIGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD
VIEFAKLKFEIVEADEFKVSLVKVSHLPVN

Sequences:

>Translated_510_residues
MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLGLLSIVSWLVTLTQPLFSIYD
LSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGANVYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIA
VIVSMIVMLLASKSITNFVNAHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE
RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVMTQRSETVWLNTEDCTDKIKQ
TIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLASIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGS
IQGIVTLHDLLESIVGEFPDIGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD
VIEFAKLKFEIVEADEFKVSLVKVSHLPVN
>Mature_510_residues
MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLGLLSIVSWLVTLTQPLFSIYD
LSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGANVYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIA
VIVSMIVMLLASKSITNFVNAHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE
RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVMTQRSETVWLNTEDCTDKIKQ
TIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLASIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGS
IQGIVTLHDLLESIVGEFPDIGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD
VIEFAKLKFEIVEADEFKVSLVKVSHLPVN

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=208, Percent_Identity=23.0769230769231, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1788119, Length=508, Percent_Identity=56.1023622047244, Blast_Score=560, Evalue=1e-161,
Organism=Escherichia coli, GI87082033, Length=522, Percent_Identity=44.8275862068966, Blast_Score=402, Evalue=1e-113,
Organism=Escherichia coli, GI1789197, Length=227, Percent_Identity=49.3392070484581, Blast_Score=206, Evalue=4e-54,
Organism=Escherichia coli, GI1790664, Length=230, Percent_Identity=28.2608695652174, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1786879, Length=229, Percent_Identity=30.1310043668122, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI145693175, Length=232, Percent_Identity=23.7068965517241, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005496
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 56125; Mature: 56125

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLSIVSWLVTLTQPLFSIYDLSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGAN
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHCCCH
VYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIAVIVSMIVMLLASKSITNFVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVM
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
TQRSETVWLNTEDCTDKIKQTIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLA
HCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCEEEEECCCCHHH
SIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGSIQGIVTLHDLLESIVGEFPD
HHHHHCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
IGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD
CCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
VIEFAKLKFEIVEADEFKVSLVKVSHLPVN
HHHHHHHHHEEEECCCEEEEEEEEECCCCC
>Mature Secondary Structure
MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLSIVSWLVTLTQPLFSIYDLSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGAN
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHCCCH
VYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIAVIVSMIVMLLASKSITNFVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVM
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
TQRSETVWLNTEDCTDKIKQTIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLA
HCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCEEEEECCCCHHH
SIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGSIQGIVTLHDLLESIVGEFPD
HHHHHCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
IGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD
CCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
VIEFAKLKFEIVEADEFKVSLVKVSHLPVN
HHHHHHHHHEEEECCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]