| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yoaE [H]
Identifier: 157963475
GI number: 157963475
Start: 4455524
End: 4457056
Strand: Reverse
Name: yoaE [H]
Synonym: Spea_3663
Alternate gene names: 157963475
Gene position: 4457056-4455524 (Counterclockwise)
Preceding gene: 157963476
Following gene: 157963473
Centisome position: 86.13
GC content: 43.9
Gene sequence:
>1533_bases ATGGAATTTTTGCTTGAACCCCAAATATGGATTGGTTTAATTACCCTGATTATTATCGAGATCGTACTCGGTATTGATAA CCTTGTCTTTATTGCCATTTTAGTTAAAAAACTCCCTCCCGAGCAAAGAGACAAAGCAAGAACTATCGGTTTATCTCTCG CACTCATAATGCGATTAGGTCTGCTGAGCATAGTGTCTTGGCTAGTCACGCTGACACAGCCCTTGTTTAGTATCTATGAC CTCAGCTTCTCGACTCGAGACCTGATTTTAATTACCGGTGGTTTGTTCCTGCTATTTAAGGCGACTCATGAGCTGCATGA ACGTTTTGAAGGGGAGGCTAATCAGCAGCAAGGCGCCAATGTTTACGCAAGTTTTGGTGTGATCATCGCGCAGATCCTTG CCTTAGACGCAGTGTTCTCTCTCGATTCGATCATTACCGCAGTGGGTATGGTAGATAGCTTAACTGTGATGATGATTGCC GTTATCGTGTCTATGATTGTGATGCTGTTAGCGTCGAAGTCGATCACTAACTTCGTCAACGCGCATCCTACGGTTATCGT ATTGTGTCTAAGCTTCCTATTGATGATTGGCTTTATTCTGGTTGCAGAAGGTTTTGGCTTACATATTCCTAAAGGCTACT TGTATGCGGCGATTGGTTTCTCAATTTTAATTGAGATGTTTAATCAAATGATCAGCTCAAGCCATGCTAAAAATGCTGAA CGAGTACCACTGCGTCAGCGCACGACTGAAGCCATCTTTCGTTTAATGGGTAATAAACATTACAACATCCATGATGACGA CGATGGTAGTGAGCCTGCGCCAGTGAGCTTTGGTGATGCCGAGCGTGAAATGGTTACAGGAGTTTTATCATTGTCTGAGC GTAATGTTCGCACTGTGATGACCCAAAGAAGTGAGACGGTTTGGTTAAATACTGAAGATTGCACCGATAAAATCAAGCAA ACAATTAAGAATAGCCGCCACCAAAATTTCCCTGTGTGCACTGGTTCTCTGGATAACTTAGTCGGTATTGTACGCAGTAA AGACTTACTATTAGGCATTGAGGCCGGGGAAGACTTAGCGTCTATTGCGGCAGCTTTCCCTGCCTATATCGTGCCCGATA GTATTAATGTGATCCGTTTACTCGATGGCTTTAGAGAGTCAAGAGCGGGCATGGCTGTGCTGGCGGACGAGTTCGGTAGT ATTCAGGGTATTGTCACCTTACATGACTTACTCGAGTCTATCGTGGGCGAGTTCCCGGATATTGGTGAGACCCCAGAGAT CAGTGTGTGTAATGACGGTTGGTTGGTTAAAGGCAGTACCTCATTGCATGACTTGGAGTCGCGCCTTGAAACACTAGGGC TAATCGATAAGCAGCAGGAGTACATTACCGTGGCTGGCTTATTATTAACCTTGAACTCAACGATTCCTAAAGTCAGTGAT GTGATTGAATTTGCCAAGCTGAAGTTTGAAATCGTTGAAGCTGACGAATTTAAAGTGTCCTTAGTTAAGGTTAGTCATCT ACCAGTAAATTAA
Upstream 100 bases:
>100_bases TCCAATATAAATGCGCTTAACTTTTATAAACGCGTTATATTTTGGAGCTATTGACCGAACTGGTGTTTAGACATCGGCTT TGGGAAAATGAAAACACACG
Downstream 100 bases:
>100_bases TTGGTTTGGAACAAAGAAAAGGGTCTGCATTGCAGACCCTTTTTTTATGCGGCTAAGGCTTATCTCAACTAGAGCATCAC AAGGTAAGTGATAAAGATCA
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLGLLSIVSWLVTLTQPLFSIYD LSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGANVYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIA VIVSMIVMLLASKSITNFVNAHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVMTQRSETVWLNTEDCTDKIKQ TIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLASIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGS IQGIVTLHDLLESIVGEFPDIGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD VIEFAKLKFEIVEADEFKVSLVKVSHLPVN
Sequences:
>Translated_510_residues MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLGLLSIVSWLVTLTQPLFSIYD LSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGANVYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIA VIVSMIVMLLASKSITNFVNAHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVMTQRSETVWLNTEDCTDKIKQ TIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLASIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGS IQGIVTLHDLLESIVGEFPDIGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD VIEFAKLKFEIVEADEFKVSLVKVSHLPVN >Mature_510_residues MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLGLLSIVSWLVTLTQPLFSIYD LSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGANVYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIA VIVSMIVMLLASKSITNFVNAHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVMTQRSETVWLNTEDCTDKIKQ TIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLASIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGS IQGIVTLHDLLESIVGEFPDIGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD VIEFAKLKFEIVEADEFKVSLVKVSHLPVN
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI310128564, Length=208, Percent_Identity=23.0769230769231, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI1788119, Length=508, Percent_Identity=56.1023622047244, Blast_Score=560, Evalue=1e-161, Organism=Escherichia coli, GI87082033, Length=522, Percent_Identity=44.8275862068966, Blast_Score=402, Evalue=1e-113, Organism=Escherichia coli, GI1789197, Length=227, Percent_Identity=49.3392070484581, Blast_Score=206, Evalue=4e-54, Organism=Escherichia coli, GI1790664, Length=230, Percent_Identity=28.2608695652174, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1786879, Length=229, Percent_Identity=30.1310043668122, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI145693175, Length=232, Percent_Identity=23.7068965517241, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 56125; Mature: 56125
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLSIVSWLVTLTQPLFSIYDLSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGAN HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHCCCH VYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIAVIVSMIVMLLASKSITNFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVM CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH TQRSETVWLNTEDCTDKIKQTIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLA HCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCEEEEECCCCHHH SIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGSIQGIVTLHDLLESIVGEFPD HHHHHCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC IGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD CCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH VIEFAKLKFEIVEADEFKVSLVKVSHLPVN HHHHHHHHHEEEECCCEEEEEEEEECCCCC >Mature Secondary Structure MEFLLEPQIWIGLITLIIIEIVLGIDNLVFIAILVKKLPPEQRDKARTIGLSLALIMRLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLSIVSWLVTLTQPLFSIYDLSFSTRDLILITGGLFLLFKATHELHERFEGEANQQQGAN HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHCCCH VYASFGVIIAQILALDAVFSLDSIITAVGMVDSLTVMMIAVIVSMIVMLLASKSITNFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AHPTVIVLCLSFLLMIGFILVAEGFGLHIPKGYLYAAIGFSILIEMFNQMISSSHAKNAE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RVPLRQRTTEAIFRLMGNKHYNIHDDDDGSEPAPVSFGDAEREMVTGVLSLSERNVRTVM CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH TQRSETVWLNTEDCTDKIKQTIKNSRHQNFPVCTGSLDNLVGIVRSKDLLLGIEAGEDLA HCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCEEEEECCCCHHH SIAAAFPAYIVPDSINVIRLLDGFRESRAGMAVLADEFGSIQGIVTLHDLLESIVGEFPD HHHHHCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC IGETPEISVCNDGWLVKGSTSLHDLESRLETLGLIDKQQEYITVAGLLLTLNSTIPKVSD CCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH VIEFAKLKFEIVEADEFKVSLVKVSHLPVN HHHHHHHHHEEEECCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]