| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963476
Identifier: 157963476
GI number: 157963476
Start: 4457438
End: 4460005
Strand: Reverse
Name: 157963476
Synonym: Spea_3664
Alternate gene names: NA
Gene position: 4460005-4457438 (Counterclockwise)
Preceding gene: 157963477
Following gene: 157963475
Centisome position: 86.19
GC content: 43.57
Gene sequence:
>2568_bases ATGAAAAAAACACTAATAGCAGTAGCAATAATATCATTAGTCGCCTGTGGTGGCGGTGATGAAGCTACTCAAGCGCAACC CAATACCGCTCCGAAAATGTTGATATCAAATGCTATAGCTCATGAGATGGTATTAGGCCAAGAAAATAGCGCATTGCCGT TAGCTACATACTTCAGTGATGCTGATGGTGATGTGTTGAGTTACAAGCTGTTGAGTACGGAGTTAGATGTGGTGATCAGC GCTTCATCACTGACTTTCGGTTCGGCTATGACAGAGGGCGTCTATGATGTCCAAGTCATAGCGCTTGATGATAAGGGCGC ACAGTCTCAGCCTCTTACTATTAAGTTGAATGTGGTCGATCCCGCCATCCCCGATTTGACCGTTAACGGTGCCAATGAGG CTTATATTGCTAATGAGGTTGTGACCCTAGCAGTTAAGTTGGACGAAGAACCTGCTTTTCCGATTTTGTACTCTTGGGGG CAAGAGACGGGGCGAACTGTTGAGAGCATCGATACTGAATCGGAGACATTAGAGTTTAGTGTACCTGGCGATATTAGTGC GCAAACATTAAGTTTTAAGCTGGTTCTAGAGTCAGATTATGCCAGTCGCTCTGAGATTGTTAATCTTGCCGTTTACTCTC CATTGGCAATAGATACGGTAGATACAGCGTTGACCGCATTTGGTGAGCGAGTCAGATTAGTGACCTCTGGTGGTAACGGT AACGACCTGAGTTTTACTAGCTCCGATGAGGCGATAGCCAAAGTCGATGATAATGGTGAAGTTACCCCTTTGAATGCTGG CTCTTTTACTATTCGCGTTATTCAGGAAGGCTTGGATTTGATCCCAGCCCTTGATGCTGAGGTGGATTTAGTTGTTTCAA ATCCTGAGGGCCTTAGGGTTTATTTAGATGTTCCTGTGCAGCTCACCAATGGCGTGAGTGCCTTTTCGGCGCCTAATGTC CCAGCGATTGGGCAAGGCAAAGACACCAGTTTTACTACTTTTGCCAAAGTGAGCTTTGATGATAAAGAGCAGATCACTGA ACTTGAAAATATTGACGGAGTGTGGAGTGGCGTTTTGTTGCAAGTTCCCGCCGATAAGTTGCTGATATTAACAACTCATA GTGTTGATTTTGCAGGGCAAAAAACATATCAGCAATCTAAAGAGTTCATCCTAACGGAAGAGGGGGAACTGACAGTACAA GTTCAGCAAGTTGCCGTAGAGGCTGAAAACATAGTGTCAACGCCAATCGACCGATGTGAAAACTATGTGGATGATAAGGG AAATATATACCCGATCTCTATGCAGGAAAGTATCGATGGTTTTGGGGCAAAACTCCAAATCTGGGGCTATGAAATTGAGC AGCAATTCATTCGCCATCACGATTGCCAACCAGCTTATATTCAATACTTTATTTCCGGAAATTTATCCGAGGAAATAAAT TACTTACATGGTGTTAATCACAATAGTGGGCAGATCTCTTATACCCGTTATTATGATGCGGTTGATGCCTATGGCGATCC CATTAAGCACATTGAGTCCCGTGAAGATGAGAGTGGTCACAGCCTAGTATTAGATGATCAACCATCAGGCTATGAGTATT ACCCTAGCGGTAGGATCCGAGTGAAACAATGGATAGCTGGCGAAGCTTCGTCTTTCATTCGTGCATTTGGTCCAGATTTA ATTGTTTATACGGATGATGAAACATCAACGTACAGCAGTATGACTTGGCATGATGCTGCACAGACCCGTGAAAAAGAGAA GGTATTTAATCCAGATGGTAGTCCGCAATGGTGCAGTTATTTAGATCCAAATAGTAAACAAGATGTCCTTTACAGTAACT GCGAGCTTTATAATGGATCTGGAGATATTAAGACCGAGGTCGATTTAGATAGGCAATATGCTATCGATACCAATGATCAA CCTATCATTGAGCCAATTAACGAGTGCCAACACTTTATTGATGATGACGGTACGGTTTACCCCATTCAGGAGCAAACGGA CAGCACAGGTTATGTTACAACGGGCTATTTTAAGAGTGGCCAGTATACCTATCATAACCAATGCAAGCCTGCTATGACTC GGTTCTATTCATCAGGCAATCCCGAGCATGCATGGACATTCCGCAAAGGGGTCAATACTCACCCTGATGGCTATACCTCG TTTGCTTATTACGACCTTTTAGACGGGGAGGGTAAGCCAATACTTGAGATGGAATCCAAGATTGAGAATGAGCTGTATGT CATACAGGAAGACGCGCCCTCTGTGGTTAAGTATTTCACTAATGGTGATATTCAATACCAAGCTTGGATGCAAACCTATG ACTTAGGTGACTGGGTTTATGGCCGCGATGCTGGGCCTGATGTAGTCACTTATGGTTATGGTAGCAATGGTTACCAGCAA AAAAGTGTTTATTGGTATAGTAAGGCTGGAGATAGGCTGAAGCGTAAAGATTTCGACTCGCAAGGTGAGCTTGATGTTTG TCATTACTACCAGATTGATCAATTGGTGCAGTCAGATGACGCATGTTTGAATGAATCAGAATTAGACATCGAGTTCGAAA TTCAATAA
Upstream 100 bases:
>100_bases AAGAAGGGGGAGCATTGATTGTTTCAGTTGTGATATGTATGTTACAGCTTGGTGTGAGGTTTATGGATACTCGCTTTAAC TAACTATGTGAGTTTTAAGG
Downstream 100 bases:
>100_bases TCGTTATATAGTCACATCATTTTCAAAAGGGCCGAGTGATTTTCACTTGGCTTTTTTGCAGCTTGTTGCCCAGCCATTCG CCTTGAATTAGTTTGTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 855; Mature: 855
Protein sequence:
>855_residues MKKTLIAVAIISLVACGGGDEATQAQPNTAPKMLISNAIAHEMVLGQENSALPLATYFSDADGDVLSYKLLSTELDVVIS ASSLTFGSAMTEGVYDVQVIALDDKGAQSQPLTIKLNVVDPAIPDLTVNGANEAYIANEVVTLAVKLDEEPAFPILYSWG QETGRTVESIDTESETLEFSVPGDISAQTLSFKLVLESDYASRSEIVNLAVYSPLAIDTVDTALTAFGERVRLVTSGGNG NDLSFTSSDEAIAKVDDNGEVTPLNAGSFTIRVIQEGLDLIPALDAEVDLVVSNPEGLRVYLDVPVQLTNGVSAFSAPNV PAIGQGKDTSFTTFAKVSFDDKEQITELENIDGVWSGVLLQVPADKLLILTTHSVDFAGQKTYQQSKEFILTEEGELTVQ VQQVAVEAENIVSTPIDRCENYVDDKGNIYPISMQESIDGFGAKLQIWGYEIEQQFIRHHDCQPAYIQYFISGNLSEEIN YLHGVNHNSGQISYTRYYDAVDAYGDPIKHIESREDESGHSLVLDDQPSGYEYYPSGRIRVKQWIAGEASSFIRAFGPDL IVYTDDETSTYSSMTWHDAAQTREKEKVFNPDGSPQWCSYLDPNSKQDVLYSNCELYNGSGDIKTEVDLDRQYAIDTNDQ PIIEPINECQHFIDDDGTVYPIQEQTDSTGYVTTGYFKSGQYTYHNQCKPAMTRFYSSGNPEHAWTFRKGVNTHPDGYTS FAYYDLLDGEGKPILEMESKIENELYVIQEDAPSVVKYFTNGDIQYQAWMQTYDLGDWVYGRDAGPDVVTYGYGSNGYQQ KSVYWYSKAGDRLKRKDFDSQGELDVCHYYQIDQLVQSDDACLNESELDIEFEIQ
Sequences:
>Translated_855_residues MKKTLIAVAIISLVACGGGDEATQAQPNTAPKMLISNAIAHEMVLGQENSALPLATYFSDADGDVLSYKLLSTELDVVIS ASSLTFGSAMTEGVYDVQVIALDDKGAQSQPLTIKLNVVDPAIPDLTVNGANEAYIANEVVTLAVKLDEEPAFPILYSWG QETGRTVESIDTESETLEFSVPGDISAQTLSFKLVLESDYASRSEIVNLAVYSPLAIDTVDTALTAFGERVRLVTSGGNG NDLSFTSSDEAIAKVDDNGEVTPLNAGSFTIRVIQEGLDLIPALDAEVDLVVSNPEGLRVYLDVPVQLTNGVSAFSAPNV PAIGQGKDTSFTTFAKVSFDDKEQITELENIDGVWSGVLLQVPADKLLILTTHSVDFAGQKTYQQSKEFILTEEGELTVQ VQQVAVEAENIVSTPIDRCENYVDDKGNIYPISMQESIDGFGAKLQIWGYEIEQQFIRHHDCQPAYIQYFISGNLSEEIN YLHGVNHNSGQISYTRYYDAVDAYGDPIKHIESREDESGHSLVLDDQPSGYEYYPSGRIRVKQWIAGEASSFIRAFGPDL IVYTDDETSTYSSMTWHDAAQTREKEKVFNPDGSPQWCSYLDPNSKQDVLYSNCELYNGSGDIKTEVDLDRQYAIDTNDQ PIIEPINECQHFIDDDGTVYPIQEQTDSTGYVTTGYFKSGQYTYHNQCKPAMTRFYSSGNPEHAWTFRKGVNTHPDGYTS FAYYDLLDGEGKPILEMESKIENELYVIQEDAPSVVKYFTNGDIQYQAWMQTYDLGDWVYGRDAGPDVVTYGYGSNGYQQ KSVYWYSKAGDRLKRKDFDSQGELDVCHYYQIDQLVQSDDACLNESELDIEFEIQ >Mature_855_residues MKKTLIAVAIISLVACGGGDEATQAQPNTAPKMLISNAIAHEMVLGQENSALPLATYFSDADGDVLSYKLLSTELDVVIS ASSLTFGSAMTEGVYDVQVIALDDKGAQSQPLTIKLNVVDPAIPDLTVNGANEAYIANEVVTLAVKLDEEPAFPILYSWG QETGRTVESIDTESETLEFSVPGDISAQTLSFKLVLESDYASRSEIVNLAVYSPLAIDTVDTALTAFGERVRLVTSGGNG NDLSFTSSDEAIAKVDDNGEVTPLNAGSFTIRVIQEGLDLIPALDAEVDLVVSNPEGLRVYLDVPVQLTNGVSAFSAPNV PAIGQGKDTSFTTFAKVSFDDKEQITELENIDGVWSGVLLQVPADKLLILTTHSVDFAGQKTYQQSKEFILTEEGELTVQ VQQVAVEAENIVSTPIDRCENYVDDKGNIYPISMQESIDGFGAKLQIWGYEIEQQFIRHHDCQPAYIQYFISGNLSEEIN YLHGVNHNSGQISYTRYYDAVDAYGDPIKHIESREDESGHSLVLDDQPSGYEYYPSGRIRVKQWIAGEASSFIRAFGPDL IVYTDDETSTYSSMTWHDAAQTREKEKVFNPDGSPQWCSYLDPNSKQDVLYSNCELYNGSGDIKTEVDLDRQYAIDTNDQ PIIEPINECQHFIDDDGTVYPIQEQTDSTGYVTTGYFKSGQYTYHNQCKPAMTRFYSSGNPEHAWTFRKGVNTHPDGYTS FAYYDLLDGEGKPILEMESKIENELYVIQEDAPSVVKYFTNGDIQYQAWMQTYDLGDWVYGRDAGPDVVTYGYGSNGYQQ KSVYWYSKAGDRLKRKDFDSQGELDVCHYYQIDQLVQSDDACLNESELDIEFEIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94764; Mature: 94764
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLIAVAIISLVACGGGDEATQAQPNTAPKMLISNAIAHEMVLGQENSALPLATYFSD CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC ADGDVLSYKLLSTELDVVISASSLTFGSAMTEGVYDVQVIALDDKGAQSQPLTIKLNVVD CCCCEEEEEEECCCEEEEEEECCEECCHHHHCCCEEEEEEEECCCCCCCCCEEEEEEEEC PAIPDLTVNGANEAYIANEVVTLAVKLDEEPAFPILYSWGQETGRTVESIDTESETLEFS CCCCCEEECCCCCEEEECEEEEEEEEECCCCCCCEEEECCCCCCCCHHHCCCCCCEEEEE VPGDISAQTLSFKLVLESDYASRSEIVNLAVYSPLAIDTVDTALTAFGERVRLVTSGGNG CCCCCCCEEEEEEEEEECCCCCCHHEEEEEEECCEEEHHHHHHHHHCCCEEEEEEECCCC NDLSFTSSDEAIAKVDDNGEVTPLNAGSFTIRVIQEGLDLIPALDAEVDLVVSNPEGLRV CCCEECCCCCEEEEECCCCCEEEECCCCEEEEEEHHCHHHCCCCCCEEEEEEECCCCEEE YLDVPVQLTNGVSAFSAPNVPAIGQGKDTSFTTFAKVSFDDKEQITELENIDGVWSGVLL EEEECEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEE QVPADKLLILTTHSVDFAGQKTYQQSKEFILTEEGELTVQVQQVAVEAENIVSTPIDRCE EECCCCEEEEEECCCCCCCCHHHHCCCCEEEECCCCEEEEEEEEHHHHHHHHCCCHHHHH NYVDDKGNIYPISMQESIDGFGAKLQIWGYEIEQQFIRHHDCQPAYIQYFISGNLSEEIN HHCCCCCCEEEEEHHHCCCCCCCEEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCHHHHH YLHGVNHNSGQISYTRYYDAVDAYGDPIKHIESREDESGHSLVLDDQPSGYEYYPSGRIR HHHCCCCCCCEEEEEEEECCHHHCCCHHHHHHCCCCCCCCEEEECCCCCCCEECCCCCEE VKQWIAGEASSFIRAFGPDLIVYTDDETSTYSSMTWHDAAQTREKEKVFNPDGSPQWCSY EEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCC LDPNSKQDVLYSNCELYNGSGDIKTEVDLDRQYAIDTNDQPIIEPINECQHFIDDDGTVY CCCCCCCCEEEECCEEECCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEE PIQEQTDSTGYVTTGYFKSGQYTYHNQCKPAMTRFYSSGNPEHAWTFRKGVNTHPDGYTS EECCCCCCCCEEEEEEEECCCEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCE FAYYDLLDGEGKPILEMESKIENELYVIQEDAPSVVKYFTNGDIQYQAWMQTYDLGDWVY EEEEEEECCCCCEEHHHHHCCCCEEEEEECCCCCCHHHHCCCCEEEEEEEEEECCCCEEC GRDAGPDVVTYGYGSNGYQQKSVYWYSKAGDRLKRKDFDSQGELDVCHYYQIDQLVQSDD CCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEEHHHHHHHHCCCC ACLNESELDIEFEIQ CCCCCCCCCEEEEEC >Mature Secondary Structure MKKTLIAVAIISLVACGGGDEATQAQPNTAPKMLISNAIAHEMVLGQENSALPLATYFSD CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC ADGDVLSYKLLSTELDVVISASSLTFGSAMTEGVYDVQVIALDDKGAQSQPLTIKLNVVD CCCCEEEEEEECCCEEEEEEECCEECCHHHHCCCEEEEEEEECCCCCCCCCEEEEEEEEC PAIPDLTVNGANEAYIANEVVTLAVKLDEEPAFPILYSWGQETGRTVESIDTESETLEFS CCCCCEEECCCCCEEEECEEEEEEEEECCCCCCCEEEECCCCCCCCHHHCCCCCCEEEEE VPGDISAQTLSFKLVLESDYASRSEIVNLAVYSPLAIDTVDTALTAFGERVRLVTSGGNG CCCCCCCEEEEEEEEEECCCCCCHHEEEEEEECCEEEHHHHHHHHHCCCEEEEEEECCCC NDLSFTSSDEAIAKVDDNGEVTPLNAGSFTIRVIQEGLDLIPALDAEVDLVVSNPEGLRV CCCEECCCCCEEEEECCCCCEEEECCCCEEEEEEHHCHHHCCCCCCEEEEEEECCCCEEE YLDVPVQLTNGVSAFSAPNVPAIGQGKDTSFTTFAKVSFDDKEQITELENIDGVWSGVLL EEEECEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEE QVPADKLLILTTHSVDFAGQKTYQQSKEFILTEEGELTVQVQQVAVEAENIVSTPIDRCE EECCCCEEEEEECCCCCCCCHHHHCCCCEEEECCCCEEEEEEEEHHHHHHHHCCCHHHHH NYVDDKGNIYPISMQESIDGFGAKLQIWGYEIEQQFIRHHDCQPAYIQYFISGNLSEEIN HHCCCCCCEEEEEHHHCCCCCCCEEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCHHHHH YLHGVNHNSGQISYTRYYDAVDAYGDPIKHIESREDESGHSLVLDDQPSGYEYYPSGRIR HHHCCCCCCCEEEEEEEECCHHHCCCHHHHHHCCCCCCCCEEEECCCCCCCEECCCCCEE VKQWIAGEASSFIRAFGPDLIVYTDDETSTYSSMTWHDAAQTREKEKVFNPDGSPQWCSY EEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCC LDPNSKQDVLYSNCELYNGSGDIKTEVDLDRQYAIDTNDQPIIEPINECQHFIDDDGTVY CCCCCCCCEEEECCEEECCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEE PIQEQTDSTGYVTTGYFKSGQYTYHNQCKPAMTRFYSSGNPEHAWTFRKGVNTHPDGYTS EECCCCCCCCEEEEEEEECCCEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCE FAYYDLLDGEGKPILEMESKIENELYVIQEDAPSVVKYFTNGDIQYQAWMQTYDLGDWVY EEEEEEECCCCCEEHHHHHCCCCEEEEEECCCCCCHHHHCCCCEEEEEEEEEECCCCEEC GRDAGPDVVTYGYGSNGYQQKSVYWYSKAGDRLKRKDFDSQGELDVCHYYQIDQLVQSDD CCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEEHHHHHHHHCCCC ACLNESELDIEFEIQ CCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA