| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mutL
Identifier: 157963356
GI number: 157963356
Start: 4324926
End: 4326812
Strand: Reverse
Name: mutL
Synonym: Spea_3542
Alternate gene names: 157963356
Gene position: 4326812-4324926 (Counterclockwise)
Preceding gene: 157963357
Following gene: 157963355
Centisome position: 83.62
GC content: 47.59
Gene sequence:
>1887_bases ATGGCAATAGAAAAATTACCGCCACAATTAGCTAATCAGATCGCCGCAGGTGAGGTGGTCGAACGTCCTGCATCTGTGAT TAAAGAGCTGGTTGAAAACAGTCTCGATGCAGGGGCTACACGCGTCGATATCGAGATTGAAAAAGGCGGCGCTAAACTTA TTCGGATCCGCGATAATGGCTCAGGGATCCCAAAAGAAGATCTGAGTCTAGCTTTGTCTCGACATGCCACGTCCAAGCTT AAATCGCTGGATGATTTAGAGGCTATTTTGAGCTTTGGTTTTCGCGGCGAAGCGTTAGCGAGTATTAGCTCTGTTTCGCG GCTTATCTTAACCTCACGAACAGCCGAGCAAACAGAGGCCTGGCAAGCGCACGCCGAGGGTACCGAGATGGCCGTTAAGG TATTACCAGCGGCTCATCCTGTCGGTTCAACTGTCGAAGCTGTGGATTTGTTTTTTAATACCCCAGCAAGGCGTCGTTTC TTAAAGAGTGATAAGACAGAGTTCACCCATATTGATGAGTGGCTCAAGCGTATAGCTTTGGCTAGGCGTGATATCCATTT CACCTTAAAACACAACGGTAAGACGGTACGCAATTACCGTCCTGCGAATACCGAGATTCAGTATATTCAGCGCTTGGGGC AAATCTGCGGTAAAGCATTCGCAGAAACCTGCCTGCGTATAGAGTGTGAGCATAATGACTTAAAACTAAGTGGTTACTTA CAATCACCTAGTGCTGCTAGCGGCTACAGTGAGACCCAGTATTTCTATGTGAATGGTCGCCTAGTAAAAGACAGACTGGT TAATCACGCCGTTCGTCAGGCGTTTTCGCAATATGCCGAGGGTATTTCTCCTGGTTACGTGCTGATGCTAGAGCTTGACC CGCATCAAGTGGATGTGAACGTACATCCGGCAAAACATGAGGTACGTTTTCATCAGAGTCGTTACGTACACGACTATATT TTACAAGCCCTGCAGTCGGCGATGGCGCAATCGACTCAACTTAGTGTTGATATAGAACCAGAGTCCGAACAGACTACTGC ATGGCAAACAAGCCCGACGCGAGGAGCTGTAGCACCGTCTCACTACGTTGACGAATCGAAGAGTAAGCCATCGGCAGTGT TCGATGTACGTGAAAGACACTCAAGCGCCAGTCAAGCGGGTTACTCAGGGGGCGGGGGGAGTTATAGGAGTCAACTTAAA CCAGCTTCTAGAAACTCCGAGGTAAGTTTACCCTCTCAGACGAGTATTCGTGCATATGGTGAGCTCTTGAGTACTGACTC TGTTCAGACTCAAAGCACGAATGTGCCTCTACGTCCAGCAGCTCATCAAGCCGGCATGATGTCTACCTCTCATGGGGCGG CGAGTATGCCGCCAGTCATAGCGGGCCAATACTGGGTGCTAGTTAAAGAGGATAAAATATCTCTGCTGGATATTGCCATG GTAGCAAAGGCGGCATTGAAAGCAGAAATAGCAGCCAAGCTTGCACAAGGTATAATTGGCCAACCTTTATTGATGCCTGT AGCGATTAGTGTTGATGATGATTGGCCTGAGATTATCGATAATCGTGAGCAGTTATTACGAAAGTTGGGAATAGAGCTCT CTATTCGTCTCGGGCAGTTGATTATTAAGAAAGTGCCCCCATATCTAAGAGATAGTCAACTGGCAGCCTTAATCCCTGAA TTACTAGAGTGGATTAGATTAGAATTACCAAGCGATGCCGCTGTTATAAAGTGGCTTGCAGAGCAAGCAGCAAACCGATT TACTTCGGCCAGTGAGGCATGGTTTGCCTTCAGTGCATTGCCGGATGATGTGCAGTGTGAGCTTTATAATCACTCCCAAG AGTTACCTTGGGAGCAATGGATGAAAGAAAATCAGAGTGACCGATAA
Upstream 100 bases:
>100_bases ATAAGCCGTTTGAAGAAGGCAAACAACCTTAAATCAAATAACCTACGAATTGGTCAGAAATTAAAGATTCCGAGTGCGTA AGGGCTTTTGAGAGTACACA
Downstream 100 bases:
>100_bases AAAATCACAGAAAGTTATTACCTTGATGGGGCCTACAGCCTCAGGTAAAACCGCATTAGCGATTGAGCTTGTTAAGCAGT ATGACTGTGAGATCATCTCT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MAIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGAKLIRIRDNGSGIPKEDLSLALSRHATSKL KSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQTEAWQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRF LKSDKTEFTHIDEWLKRIALARRDIHFTLKHNGKTVRNYRPANTEIQYIQRLGQICGKAFAETCLRIECEHNDLKLSGYL QSPSAASGYSETQYFYVNGRLVKDRLVNHAVRQAFSQYAEGISPGYVLMLELDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSAMAQSTQLSVDIEPESEQTTAWQTSPTRGAVAPSHYVDESKSKPSAVFDVRERHSSASQAGYSGGGGSYRSQLK PASRNSEVSLPSQTSIRAYGELLSTDSVQTQSTNVPLRPAAHQAGMMSTSHGAASMPPVIAGQYWVLVKEDKISLLDIAM VAKAALKAEIAAKLAQGIIGQPLLMPVAISVDDDWPEIIDNREQLLRKLGIELSIRLGQLIIKKVPPYLRDSQLAALIPE LLEWIRLELPSDAAVIKWLAEQAANRFTSASEAWFAFSALPDDVQCELYNHSQELPWEQWMKENQSDR
Sequences:
>Translated_628_residues MAIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGAKLIRIRDNGSGIPKEDLSLALSRHATSKL KSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQTEAWQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRF LKSDKTEFTHIDEWLKRIALARRDIHFTLKHNGKTVRNYRPANTEIQYIQRLGQICGKAFAETCLRIECEHNDLKLSGYL QSPSAASGYSETQYFYVNGRLVKDRLVNHAVRQAFSQYAEGISPGYVLMLELDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSAMAQSTQLSVDIEPESEQTTAWQTSPTRGAVAPSHYVDESKSKPSAVFDVRERHSSASQAGYSGGGGSYRSQLK PASRNSEVSLPSQTSIRAYGELLSTDSVQTQSTNVPLRPAAHQAGMMSTSHGAASMPPVIAGQYWVLVKEDKISLLDIAM VAKAALKAEIAAKLAQGIIGQPLLMPVAISVDDDWPEIIDNREQLLRKLGIELSIRLGQLIIKKVPPYLRDSQLAALIPE LLEWIRLELPSDAAVIKWLAEQAANRFTSASEAWFAFSALPDDVQCELYNHSQELPWEQWMKENQSDR >Mature_627_residues AIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGAKLIRIRDNGSGIPKEDLSLALSRHATSKLK SLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQTEAWQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRFL KSDKTEFTHIDEWLKRIALARRDIHFTLKHNGKTVRNYRPANTEIQYIQRLGQICGKAFAETCLRIECEHNDLKLSGYLQ SPSAASGYSETQYFYVNGRLVKDRLVNHAVRQAFSQYAEGISPGYVLMLELDPHQVDVNVHPAKHEVRFHQSRYVHDYIL QALQSAMAQSTQLSVDIEPESEQTTAWQTSPTRGAVAPSHYVDESKSKPSAVFDVRERHSSASQAGYSGGGGSYRSQLKP ASRNSEVSLPSQTSIRAYGELLSTDSVQTQSTNVPLRPAAHQAGMMSTSHGAASMPPVIAGQYWVLVKEDKISLLDIAMV AKAALKAEIAAKLAQGIIGQPLLMPVAISVDDDWPEIIDNREQLLRKLGIELSIRLGQLIIKKVPPYLRDSQLAALIPEL LEWIRLELPSDAAVIKWLAEQAANRFTSASEAWFAFSALPDDVQCELYNHSQELPWEQWMKENQSDR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=339, Percent_Identity=36.5781710914454, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI4505911, Length=340, Percent_Identity=29.4117647058824, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI189458898, Length=340, Percent_Identity=29.4117647058824, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI189458896, Length=339, Percent_Identity=28.9085545722714, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI4505913, Length=341, Percent_Identity=26.6862170087977, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI310128478, Length=341, Percent_Identity=26.6862170087977, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI263191589, Length=244, Percent_Identity=30.7377049180328, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI91992162, Length=341, Percent_Identity=24.9266862170088, Blast_Score=93, Evalue=1e-18, Organism=Homo sapiens, GI91992160, Length=341, Percent_Identity=24.9266862170088, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI310128480, Length=293, Percent_Identity=23.8907849829352, Blast_Score=92, Evalue=2e-18, Organism=Escherichia coli, GI1790612, Length=570, Percent_Identity=48.7719298245614, Blast_Score=494, Evalue=1e-141, Organism=Caenorhabditis elegans, GI71991825, Length=325, Percent_Identity=35.3846153846154, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17562796, Length=345, Percent_Identity=26.6666666666667, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323819, Length=320, Percent_Identity=39.0625, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324247, Length=342, Percent_Identity=26.3157894736842, Blast_Score=104, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6325093, Length=307, Percent_Identity=26.3843648208469, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323063, Length=357, Percent_Identity=24.3697478991597, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI17136968, Length=341, Percent_Identity=35.4838709677419, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI17136970, Length=357, Percent_Identity=26.0504201680672, Blast_Score=120, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_SHEPA (A8H8G8)
Other databases:
- EMBL: CP000851 - RefSeq: YP_001503390.1 - ProteinModelPortal: A8H8G8 - STRING: A8H8G8 - GeneID: 5663928 - GenomeReviews: CP000851_GR - KEGG: spl:Spea_3542 - NMPDR: fig|398579.3.peg.3056 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: FTHIDEW - ProtClustDB: PRK00095 - BioCyc: SPEA398579:SPEA_3542-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 69497; Mature: 69366
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGAKLIRIRDNG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC SGIPKEDLSLALSRHATSKLKSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQTEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHH WQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL HHHHCCCHHEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHH ARRDIHFTLKHNGKTVRNYRPANTEIQYIQRLGQICGKAFAETCLRIECEHNDLKLSGYL HHCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEE QSPSAASGYSETQYFYVNGRLVKDRLVNHAVRQAFSQYAEGISPGYVLMLELDPHQVDVN CCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEE VHPAKHEVRFHQSRYVHDYILQALQSAMAQSTQLSVDIEPESEQTTAWQTSPTRGAVAPS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCCCH HYVDESKSKPSAVFDVRERHSSASQAGYSGGGGSYRSQLKPASRNSEVSLPSQTSIRAYG HHCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHH ELLSTDSVQTQSTNVPLRPAAHQAGMMSTSHGAASMPPVIAGQYWVLVKEDKISLLDIAM HHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCEEEEEECCCCHHHHHHH VAKAALKAEIAAKLAQGIIGQPLLMPVAISVDDDWPEIIDNREQLLRKLGIELSIRLGQL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHCCHHHHHHHHCCEEEEHHHHH IIKKVPPYLRDSQLAALIPELLEWIRLELPSDAAVIKWLAEQAANRFTSASEAWFAFSAL HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECC PDDVQCELYNHSQELPWEQWMKENQSDR CCCCEEEEECCCCCCCHHHHHHCCCCCC >Mature Secondary Structure AIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGAKLIRIRDNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC SGIPKEDLSLALSRHATSKLKSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQTEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHH WQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL HHHHCCCHHEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHH ARRDIHFTLKHNGKTVRNYRPANTEIQYIQRLGQICGKAFAETCLRIECEHNDLKLSGYL HHCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEE QSPSAASGYSETQYFYVNGRLVKDRLVNHAVRQAFSQYAEGISPGYVLMLELDPHQVDVN CCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEE VHPAKHEVRFHQSRYVHDYILQALQSAMAQSTQLSVDIEPESEQTTAWQTSPTRGAVAPS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCCCH HYVDESKSKPSAVFDVRERHSSASQAGYSGGGGSYRSQLKPASRNSEVSLPSQTSIRAYG HHCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHH ELLSTDSVQTQSTNVPLRPAAHQAGMMSTSHGAASMPPVIAGQYWVLVKEDKISLLDIAM HHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCEEEEEECCCCHHHHHHH VAKAALKAEIAAKLAQGIIGQPLLMPVAISVDDDWPEIIDNREQLLRKLGIELSIRLGQL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHCCHHHHHHHHCCEEEEHHHHH IIKKVPPYLRDSQLAALIPELLEWIRLELPSDAAVIKWLAEQAANRFTSASEAWFAFSAL HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECC PDDVQCELYNHSQELPWEQWMKENQSDR CCCCEEEEECCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA