| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963267
Identifier: 157963267
GI number: 157963267
Start: 4221496
End: 4222065
Strand: Reverse
Name: 157963267
Synonym: Spea_3453
Alternate gene names: NA
Gene position: 4222065-4221496 (Counterclockwise)
Preceding gene: 157963268
Following gene: 157963264
Centisome position: 81.59
GC content: 38.42
Gene sequence:
>570_bases ATGGTTAAGTTCAGTGGTTGCGTTGCTCACACCTTAATGCGGCGTCAGGGGCAAATTGTGAGTCCAGATATCTTTTTAGA TGATTTTGAAATTACAGAAAATACGGAAGAACTACAGGCAATACTTGGACGTTGTTTGATAGTTGCAACTCGTTTTGATT ACTTGTGCGATCATACATCGAAATATCTTGAACTAAAAAACTCGTTTGTAATGGTCGTTGATAGACAGGAATTCGAGGCT TATGCGACAGAATTGATAGGTAAATTCCGAGTTCTATATAAAAATATTGAATCACTTCCGATAGCTGATGCCGTAAAAGA TATCCTCCATGCTGCGAGAGAAGCGAGAAATGAAATAGCTCATAGTTTAACTATTGGTTTAACTGGGTGCTTGGATACAA AAATTGATGAGAGCAACTTTAAATCTCAGGTGATCCAACTTATTCAAGAGGTTGCTGCTGGTGATTACACTATTTCTGTA ATTTTGTCACTGCTCAACAAGGAGCCTTTGCTTCAACAGTCAAGTAAGGATTACCAAAACAACGTAGTAAATTGGGTGCT TGGGGAGTGA
Upstream 100 bases:
>100_bases AATGTAAATAAGCGTTAAAATTCAGCTAACAAGCATTTAAGAGTGACTCCCAAAGCTTGGCATTTTTAATTCCATCGTTG GGTTTCGTGTTTAAAGTGGT
Downstream 100 bases:
>100_bases ACGCATAACAAGGCGTTACCGTATATCCACTTTCCCTAATGAGACTCATAATCTTGACTGCTTTATCACGAACTAATTTC TGTCCAAACACGTTTCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MVKFSGCVAHTLMRRQGQIVSPDIFLDDFEITENTEELQAILGRCLIVATRFDYLCDHTSKYLELKNSFVMVVDRQEFEA YATELIGKFRVLYKNIESLPIADAVKDILHAAREARNEIAHSLTIGLTGCLDTKIDESNFKSQVIQLIQEVAAGDYTISV ILSLLNKEPLLQQSSKDYQNNVVNWVLGE
Sequences:
>Translated_189_residues MVKFSGCVAHTLMRRQGQIVSPDIFLDDFEITENTEELQAILGRCLIVATRFDYLCDHTSKYLELKNSFVMVVDRQEFEA YATELIGKFRVLYKNIESLPIADAVKDILHAAREARNEIAHSLTIGLTGCLDTKIDESNFKSQVIQLIQEVAAGDYTISV ILSLLNKEPLLQQSSKDYQNNVVNWVLGE >Mature_189_residues MVKFSGCVAHTLMRRQGQIVSPDIFLDDFEITENTEELQAILGRCLIVATRFDYLCDHTSKYLELKNSFVMVVDRQEFEA YATELIGKFRVLYKNIESLPIADAVKDILHAAREARNEIAHSLTIGLTGCLDTKIDESNFKSQVIQLIQEVAAGDYTISV ILSLLNKEPLLQQSSKDYQNNVVNWVLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21388; Mature: 21388
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKFSGCVAHTLMRRQGQIVSPDIFLDDFEITENTEELQAILGRCLIVATRFDYLCDHTS CCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KYLELKNSFVMVVDRQEFEAYATELIGKFRVLYKNIESLPIADAVKDILHAAREARNEIA HHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH HSLTIGLTGCLDTKIDESNFKSQVIQLIQEVAAGDYTISVILSLLNKEPLLQQSSKDYQN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHH NVVNWVLGE HHHHHCCCC >Mature Secondary Structure MVKFSGCVAHTLMRRQGQIVSPDIFLDDFEITENTEELQAILGRCLIVATRFDYLCDHTS CCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KYLELKNSFVMVVDRQEFEAYATELIGKFRVLYKNIESLPIADAVKDILHAAREARNEIA HHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH HSLTIGLTGCLDTKIDESNFKSQVIQLIQEVAAGDYTISVILSLLNKEPLLQQSSKDYQN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHH NVVNWVLGE HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA