| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963201
Identifier: 157963201
GI number: 157963201
Start: 4139622
End: 4140368
Strand: Reverse
Name: 157963201
Synonym: Spea_3386
Alternate gene names: NA
Gene position: 4140368-4139622 (Counterclockwise)
Preceding gene: 157963202
Following gene: 157963200
Centisome position: 80.01
GC content: 43.91
Gene sequence:
>747_bases ATGGCACTTCATAAAAGTAAGGCGGAGCTCTTTCCCTTACTTCACCTGCTTGATGATTTTAGTCACTTCCAATTACAAGA TGGCTTCATTCAAACATTAGCTGAAAAAGATTTGCTCCTGCAGTCTCCGCCCTCTATCAGACTCGATGAGTCTACTCTTG TTCCTAATATCAGTATTTATGACGACTCAAAGCCTGAAAATACCACCGCTCTGCAGCAATATTTCTGTAGCAAGAGTGCT GATGATAATGCCGCTATTCAGCAAATTTTCAACACTCTGAGCCCTGTAAGTCAGCTATCGGAAAGCAGGCATCAGAGGCA CTATCGCTTGGTCGCTTTTTCTGAAGAGGACAAACGAACGCCTGTGGCGTTCGTGACCTTTAACGTTGGCTTGCTCGACT CTTGGTATGCAGATGGAAACAGCTGTGATGATCGCCAAATCGGTGGCTGCTGTTATTTATTGTTTGCCTATGTGGTACCC CAGTGGCGGCATCTAGGAGTCGGGAGTTGCTTGTTTCATCTGATTTCAAATCTATTTTGGTCTCAGTTACAGTTTATCGA TGCCCAGGCGAAGTCTCATAATTTGACTATGGTTCCCTTGGTTTATGAGAGTGAAGCTGCAAAAGGAGCCGAAGGCTTGC TGCATCAACTGGCAATGAATATTAATCAGTATGAGGCTCTCTCATTAACCAATGATAAAGCTTCGACCATAGTTAAACCC TGCGTGAGTAACATTTCAGTTTCCTAA
Upstream 100 bases:
>100_bases TACATAAGTAGCACCTATAGTTAATGCAGAATGTTGTCTGCACTGAAGTCTGATAATTTGGTTTTGAGGCAGATAATGGG TTTATTGAGTGGAGCGGTAT
Downstream 100 bases:
>100_bases AGCTTATAGCCAACTCATCATCTGCTAATAGGTGCGCAATCCGCGCACCCATAATTATTTAGCCGTCCGGCATAAATAAT ATTAATTCCTTTAAGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MALHKSKAELFPLLHLLDDFSHFQLQDGFIQTLAEKDLLLQSPPSIRLDESTLVPNISIYDDSKPENTTALQQYFCSKSA DDNAAIQQIFNTLSPVSQLSESRHQRHYRLVAFSEEDKRTPVAFVTFNVGLLDSWYADGNSCDDRQIGGCCYLLFAYVVP QWRHLGVGSCLFHLISNLFWSQLQFIDAQAKSHNLTMVPLVYESEAAKGAEGLLHQLAMNINQYEALSLTNDKASTIVKP CVSNISVS
Sequences:
>Translated_248_residues MALHKSKAELFPLLHLLDDFSHFQLQDGFIQTLAEKDLLLQSPPSIRLDESTLVPNISIYDDSKPENTTALQQYFCSKSA DDNAAIQQIFNTLSPVSQLSESRHQRHYRLVAFSEEDKRTPVAFVTFNVGLLDSWYADGNSCDDRQIGGCCYLLFAYVVP QWRHLGVGSCLFHLISNLFWSQLQFIDAQAKSHNLTMVPLVYESEAAKGAEGLLHQLAMNINQYEALSLTNDKASTIVKP CVSNISVS >Mature_247_residues ALHKSKAELFPLLHLLDDFSHFQLQDGFIQTLAEKDLLLQSPPSIRLDESTLVPNISIYDDSKPENTTALQQYFCSKSAD DNAAIQQIFNTLSPVSQLSESRHQRHYRLVAFSEEDKRTPVAFVTFNVGLLDSWYADGNSCDDRQIGGCCYLLFAYVVPQ WRHLGVGSCLFHLISNLFWSQLQFIDAQAKSHNLTMVPLVYESEAAKGAEGLLHQLAMNINQYEALSLTNDKASTIVKPC VSNISVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27817; Mature: 27686
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHKSKAELFPLLHLLDDFSHFQLQDGFIQTLAEKDLLLQSPPSIRLDESTLVPNISIY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEE DDSKPENTTALQQYFCSKSADDNAAIQQIFNTLSPVSQLSESRHQRHYRLVAFSEEDKRT CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC PVAFVTFNVGLLDSWYADGNSCDDRQIGGCCYLLFAYVVPQWRHLGVGSCLFHLISNLFW CEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHH SQLQFIDAQAKSHNLTMVPLVYESEAAKGAEGLLHQLAMNINQYEALSLTNDKASTIVKP HHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHEEEECCCHHHHHHHH CVSNISVS HHHHCCCC >Mature Secondary Structure ALHKSKAELFPLLHLLDDFSHFQLQDGFIQTLAEKDLLLQSPPSIRLDESTLVPNISIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEE DDSKPENTTALQQYFCSKSADDNAAIQQIFNTLSPVSQLSESRHQRHYRLVAFSEEDKRT CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC PVAFVTFNVGLLDSWYADGNSCDDRQIGGCCYLLFAYVVPQWRHLGVGSCLFHLISNLFW CEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHH SQLQFIDAQAKSHNLTMVPLVYESEAAKGAEGLLHQLAMNINQYEALSLTNDKASTIVKP HHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHEEEECCCHHHHHHHH CVSNISVS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA