| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is leuE [H]
Identifier: 157963134
GI number: 157963134
Start: 4058662
End: 4059276
Strand: Reverse
Name: leuE [H]
Synonym: Spea_3318
Alternate gene names: 157963134
Gene position: 4059276-4058662 (Counterclockwise)
Preceding gene: 157963139
Following gene: 157963130
Centisome position: 78.45
GC content: 47.64
Gene sequence:
>615_bases ATGACTATTAGTGCTTGGCTAGGCTTGTTAGCTATCTGCTGTTTAGGGGCCATGTCACCGGGGCCGAGTCTGGCTATGGT AGTGAGACATACCTTAGGTGGAGGTAGAGGTAAAGGCATCATCTGCGCTTGGGCGCACTCAATTGGTATTGGTGTTTATG CTTTGCTGACTTTATTAGGCTTAGCGGTATTGCTAAAGCAGGCGCCTATGGTGTTTAACGGTATTGCGATTATAGGTGCG CTTTATCTTGCGTATATGGGCGTGCAGGCGCTGCGCTCAAAAGGCGGCATGTCAGATAAGCTAGCAGCTGGTGAGTCGAC CGATGTCTTTACCGCGGCGCGTGATGGCTTAGCTATTTCACTGTTTAACCCCAAAATAATGTTGTTTTTTTTGGCGCTGT TTAGCCAGTTTGTGCTGGTTGCAGACAATATGACGGGCAAGGTCTTGATTGTATTAACGCCGCTGATTGTTGATGGCCTT TGGTACACGCTTATCGCCTTACTGCTTTCTCACTCGTCAGTGCTGCCTAAACTTAGAGAAAAAGCAGCCCTAATTGATAA ACTATCGGGTGTAGTGCTTATTTTGTTGGCGGTGCGAGTAGTTGTGACGCTTTAG
Upstream 100 bases:
>100_bases TTGTGATCTGCCTGCAGAGATCCTGTATATTGTGGCGATTACAAATAACTGAAACAGGTTAAGGCCAATACGTGAACAAA AATAATAATCGAGGCAAGCA
Downstream 100 bases:
>100_bases ATATTACAGATACAAAAAACGCCATCAATTTGATGGCGTTTTTTCGTTAAGCGTTTAATGCACTTGTAACCGATAGCGAT TAAGAGGTGAATACCTGTAC
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTISAWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGVYALLTLLGLAVLLKQAPMVFNGIAIIGA LYLAYMGVQALRSKGGMSDKLAAGESTDVFTAARDGLAISLFNPKIMLFFLALFSQFVLVADNMTGKVLIVLTPLIVDGL WYTLIALLLSHSSVLPKLREKAALIDKLSGVVLILLAVRVVVTL
Sequences:
>Translated_204_residues MTISAWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGVYALLTLLGLAVLLKQAPMVFNGIAIIGA LYLAYMGVQALRSKGGMSDKLAAGESTDVFTAARDGLAISLFNPKIMLFFLALFSQFVLVADNMTGKVLIVLTPLIVDGL WYTLIALLLSHSSVLPKLREKAALIDKLSGVVLILLAVRVVVTL >Mature_203_residues TISAWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGVYALLTLLGLAVLLKQAPMVFNGIAIIGAL YLAYMGVQALRSKGGMSDKLAAGESTDVFTAARDGLAISLFNPKIMLFFLALFSQFVLVADNMTGKVLIVLTPLIVDGLW YTLIALLLSHSSVLPKLREKAALIDKLSGVVLILLAVRVVVTL
Specific function: Exporter of leucine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=183, Percent_Identity=28.4153005464481, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786522, Length=177, Percent_Identity=27.1186440677966, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI48994978, Length=195, Percent_Identity=27.6923076923077, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21432; Mature: 21301
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISAWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGVYALLTLLG CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH LAVLLKQAPMVFNGIAIIGALYLAYMGVQALRSKGGMSDKLAAGESTDVFTAARDGLAIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHCCCEEEE LFNPKIMLFFLALFSQFVLVADNMTGKVLIVLTPLIVDGLWYTLIALLLSHSSVLPKLRE EECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH KAALIDKLSGVVLILLAVRVVVTL HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TISAWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGVYALLTLLG CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH LAVLLKQAPMVFNGIAIIGALYLAYMGVQALRSKGGMSDKLAAGESTDVFTAARDGLAIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHCCCEEEE LFNPKIMLFFLALFSQFVLVADNMTGKVLIVLTPLIVDGLWYTLIALLLSHSSVLPKLRE EECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH KAALIDKLSGVVLILLAVRVVVTL HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA