| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963114
Identifier: 157963114
GI number: 157963114
Start: 4038644
End: 4040521
Strand: Reverse
Name: 157963114
Synonym: Spea_3298
Alternate gene names: NA
Gene position: 4040521-4038644 (Counterclockwise)
Preceding gene: 157963116
Following gene: 157963113
Centisome position: 78.08
GC content: 33.07
Gene sequence:
>1878_bases ATGCCTAAAAATGTACGTGCAAGACCTTATACATCACACCTTAAGATGCTTGAAGAAAAGAAGGGTTGTCTATCTGGACG GAATCAAGCAGAGTTCAGCTCTTGGGTTGATCCTGAAAAGGTAAAGTTCGCAGTTGAGGAGTTGAGAAAGGTTGAGTTTG TAGTAACGATTTTCAGGAAAGAAGAACCTAAAAAAGTAAAAGAGTTTTACTTTCCTTGTCAATTGATTGAAAAGCGTAGC CCTAAAAAGGTTAATATCAAAGCTGATACATATGCTGATTTTAATTGTGATGAATCAATCATAATCGAAGGCCTTGTTGG TCATGGTAAGTCAATACTTTTAAGGCATTTACATAATTATGAGTTGAATTCGGCAGCAACAATTCCATTATTTATAGAGC TAAAAGATGTAAATGTTGAGCAACCTATATCTGAGTTTTTTTCAGAATACATAGAGAAAAACCTTGGTTTTAGGTGTTCT GAAAAACTGTTTGAATCGTTGTTGAAAATTGGTTTGTTTTCATTCTTCTTTGATGGCTTTGATGAGGTTGAATATGATAT TAGGCAGAATGTTGTAGAGTTTATTCAATATGTAGCTTCGAGAAGTTCAAACAAAAAAATATTTGTTACAACTCGGCCTG GCAATGAGATACAACGTTCATCTAGCTTTATTATTTTTAGTATTAAACCCCTTGATAACGATGAGCAGATTGGTTTTGTA AAAAAATTAATGGCGACAGAAAAGTCTATCGTTCAAAAAGAGAATTTGCAGCGAAACATTGATAGTTTACCTAAAAAACT AAGAGAGCTTTTGAAAACACCTCTTATGCTTACATTGTTTTCAATGGTATATCGAAATAAAGTAAAAATTCCGGAAGACC ACTCAGACTTTTATAAAAAACTGTTTGATACTTTGGTGTCTGAACATGATGGTTTAAAATTGGGTTTTACAAGGCCAACA AAAACATTGTTCAGTGCAGATAAAATCAAAACTGCATTGGAATTGTTGTCATATTATTCTATTAAATCATCTGAATTATC GGGAAGTAAGGACGACTTCATTCGGGTAATAAAAAATGTTCTTTTAGATATGGGAGAGAAAGTAACTCAAGCAAGCAATT TATTAGATGATATAACTAGGAATACGTGTTTACTGCAAATCGATGATCATGATTATCGATTTTTACATGAAATGATACCA CATTACTTCGCTGCATCTTGTATTAAAGAGCAAACTGATGATTTAGATGCGATAAGTTTTTATGGTTCTAGTCGCCGTAA GTGGCGACAGTGGTTAAATGTATTGCAATTTTTAGCAGATATTGACACTAGACGATTTGTAAGAAATCTTTATTTACCTG AAGTAGAGTTGTTTTTTGAGCCATCACTACTTCCTAGGAAGTTGTCGTTTACTAGTGAAGGTGCTGATATGTTTTCGAGA AATTTTTATTTTATTATATTTATTGGAAGCTCAAAGGAAATGACGGCAGAGGATAAGTATAAAGATGTTTTAATGTTTAA TGTGTCAACAAACTTCCTAGTGGATAAACACTTTTGGAACCCAGGTCATTCTAACGGAACCACAGAGAAAGTTAATCTAG ATAGTTTTATTGATAGGGTTTACAGGAAAGTAAGTGGGTGTAGACAAGATGATAATTTTACTCAGTTATCAAAAATTGGT GTTGCGTCTGACATAGAAGAGCACAAAGTAAGGGTTATTAACCTCTTCGAAGTGTTAAATGAGTTGAAGTTGAATCAATG GTTTAAAGATGAGTTGAATAAACTGCCTTTAGATAATATGAAGGCAAAGTATATGAAGTATTATGAACTTAATAGAAGGA AAGAGGAAGAAAGTAAAAAGGGGAAGTTTGAGGTATGA
Upstream 100 bases:
>100_bases CGATATAACTGCAATAGCGACTCGTATGGTTTTACGAAGTTTTGTAGGAGAGTGTATCTAGACTTTAATCGTTATCATTT GATATTTACTGGTTTAAAAT
Downstream 100 bases:
>100_bases GTATTCTTTGGAGTGATTTGCGGGTTTTAGGTAATAGTAAGTTGATTACAAGTAATTACTTTTGGATATTTTTAATCCCG TTTTTGACTATTAATTTTGA
Product: NACHT family-like NTPase
Products: NA
Alternate protein names: Signal Transduction Protein
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MPKNVRARPYTSHLKMLEEKKGCLSGRNQAEFSSWVDPEKVKFAVEELRKVEFVVTIFRKEEPKKVKEFYFPCQLIEKRS PKKVNIKADTYADFNCDESIIIEGLVGHGKSILLRHLHNYELNSAATIPLFIELKDVNVEQPISEFFSEYIEKNLGFRCS EKLFESLLKIGLFSFFFDGFDEVEYDIRQNVVEFIQYVASRSSNKKIFVTTRPGNEIQRSSSFIIFSIKPLDNDEQIGFV KKLMATEKSIVQKENLQRNIDSLPKKLRELLKTPLMLTLFSMVYRNKVKIPEDHSDFYKKLFDTLVSEHDGLKLGFTRPT KTLFSADKIKTALELLSYYSIKSSELSGSKDDFIRVIKNVLLDMGEKVTQASNLLDDITRNTCLLQIDDHDYRFLHEMIP HYFAASCIKEQTDDLDAISFYGSSRRKWRQWLNVLQFLADIDTRRFVRNLYLPEVELFFEPSLLPRKLSFTSEGADMFSR NFYFIIFIGSSKEMTAEDKYKDVLMFNVSTNFLVDKHFWNPGHSNGTTEKVNLDSFIDRVYRKVSGCRQDDNFTQLSKIG VASDIEEHKVRVINLFEVLNELKLNQWFKDELNKLPLDNMKAKYMKYYELNRRKEEESKKGKFEV
Sequences:
>Translated_625_residues MPKNVRARPYTSHLKMLEEKKGCLSGRNQAEFSSWVDPEKVKFAVEELRKVEFVVTIFRKEEPKKVKEFYFPCQLIEKRS PKKVNIKADTYADFNCDESIIIEGLVGHGKSILLRHLHNYELNSAATIPLFIELKDVNVEQPISEFFSEYIEKNLGFRCS EKLFESLLKIGLFSFFFDGFDEVEYDIRQNVVEFIQYVASRSSNKKIFVTTRPGNEIQRSSSFIIFSIKPLDNDEQIGFV KKLMATEKSIVQKENLQRNIDSLPKKLRELLKTPLMLTLFSMVYRNKVKIPEDHSDFYKKLFDTLVSEHDGLKLGFTRPT KTLFSADKIKTALELLSYYSIKSSELSGSKDDFIRVIKNVLLDMGEKVTQASNLLDDITRNTCLLQIDDHDYRFLHEMIP HYFAASCIKEQTDDLDAISFYGSSRRKWRQWLNVLQFLADIDTRRFVRNLYLPEVELFFEPSLLPRKLSFTSEGADMFSR NFYFIIFIGSSKEMTAEDKYKDVLMFNVSTNFLVDKHFWNPGHSNGTTEKVNLDSFIDRVYRKVSGCRQDDNFTQLSKIG VASDIEEHKVRVINLFEVLNELKLNQWFKDELNKLPLDNMKAKYMKYYELNRRKEEESKKGKFEV >Mature_624_residues PKNVRARPYTSHLKMLEEKKGCLSGRNQAEFSSWVDPEKVKFAVEELRKVEFVVTIFRKEEPKKVKEFYFPCQLIEKRSP KKVNIKADTYADFNCDESIIIEGLVGHGKSILLRHLHNYELNSAATIPLFIELKDVNVEQPISEFFSEYIEKNLGFRCSE KLFESLLKIGLFSFFFDGFDEVEYDIRQNVVEFIQYVASRSSNKKIFVTTRPGNEIQRSSSFIIFSIKPLDNDEQIGFVK KLMATEKSIVQKENLQRNIDSLPKKLRELLKTPLMLTLFSMVYRNKVKIPEDHSDFYKKLFDTLVSEHDGLKLGFTRPTK TLFSADKIKTALELLSYYSIKSSELSGSKDDFIRVIKNVLLDMGEKVTQASNLLDDITRNTCLLQIDDHDYRFLHEMIPH YFAASCIKEQTDDLDAISFYGSSRRKWRQWLNVLQFLADIDTRRFVRNLYLPEVELFFEPSLLPRKLSFTSEGADMFSRN FYFIIFIGSSKEMTAEDKYKDVLMFNVSTNFLVDKHFWNPGHSNGTTEKVNLDSFIDRVYRKVSGCRQDDNFTQLSKIGV ASDIEEHKVRVINLFEVLNELKLNQWFKDELNKLPLDNMKAKYMKYYELNRRKEEESKKGKFEV
Specific function: Unknown
COG id: COG5635
COG function: function code T; Predicted NTPase (NACHT family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73251; Mature: 73120
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNVRARPYTSHLKMLEEKKGCLSGRNQAEFSSWVDPEKVKFAVEELRKVEFVVTIFRK CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC EEPKKVKEFYFPCQLIEKRSPKKVNIKADTYADFNCDESIIIEGLVGHGKSILLRHLHNY CCHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC ELNSAATIPLFIELKDVNVEQPISEFFSEYIEKNLGFRCSEKLFESLLKIGLFSFFFDGF CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCH DEVEYDIRQNVVEFIQYVASRSSNKKIFVTTRPGNEIQRSSSFIIFSIKPLDNDEQIGFV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCEEEEEEECCCCCHHHHHH KKLMATEKSIVQKENLQRNIDSLPKKLRELLKTPLMLTLFSMVYRNKVKIPEDHSDFYKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHH LFDTLVSEHDGLKLGFTRPTKTLFSADKIKTALELLSYYSIKSSELSGSKDDFIRVIKNV HHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LLDMGEKVTQASNLLDDITRNTCLLQIDDHDYRFLHEMIPHYFAASCIKEQTDDLDAISF HHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH YGSSRRKWRQWLNVLQFLADIDTRRFVRNLYLPEVELFFEPSLLPRKLSFTSEGADMFSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCC NFYFIIFIGSSKEMTAEDKYKDVLMFNVSTNFLVDKHFWNPGHSNGTTEKVNLDSFIDRV CCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEECHHHHHHHH YRKVSGCRQDDNFTQLSKIGVASDIEEHKVRVINLFEVLNELKLNQWFKDELNKLPLDNM HHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KAKYMKYYELNRRKEEESKKGKFEV HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PKNVRARPYTSHLKMLEEKKGCLSGRNQAEFSSWVDPEKVKFAVEELRKVEFVVTIFRK CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC EEPKKVKEFYFPCQLIEKRSPKKVNIKADTYADFNCDESIIIEGLVGHGKSILLRHLHNY CCHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC ELNSAATIPLFIELKDVNVEQPISEFFSEYIEKNLGFRCSEKLFESLLKIGLFSFFFDGF CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCH DEVEYDIRQNVVEFIQYVASRSSNKKIFVTTRPGNEIQRSSSFIIFSIKPLDNDEQIGFV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCEEEEEEECCCCCHHHHHH KKLMATEKSIVQKENLQRNIDSLPKKLRELLKTPLMLTLFSMVYRNKVKIPEDHSDFYKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHH LFDTLVSEHDGLKLGFTRPTKTLFSADKIKTALELLSYYSIKSSELSGSKDDFIRVIKNV HHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LLDMGEKVTQASNLLDDITRNTCLLQIDDHDYRFLHEMIPHYFAASCIKEQTDDLDAISF HHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH YGSSRRKWRQWLNVLQFLADIDTRRFVRNLYLPEVELFFEPSLLPRKLSFTSEGADMFSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCC NFYFIIFIGSSKEMTAEDKYKDVLMFNVSTNFLVDKHFWNPGHSNGTTEKVNLDSFIDRV CCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEECHHHHHHHH YRKVSGCRQDDNFTQLSKIGVASDIEEHKVRVINLFEVLNELKLNQWFKDELNKLPLDNM HHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KAKYMKYYELNRRKEEESKKGKFEV HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA