| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963113
Identifier: 157963113
GI number: 157963113
Start: 4038030
End: 4038560
Strand: Reverse
Name: 157963113
Synonym: Spea_3297
Alternate gene names: NA
Gene position: 4038560-4038030 (Counterclockwise)
Preceding gene: 157963114
Following gene: 157963112
Centisome position: 78.05
GC content: 32.2
Gene sequence:
>531_bases TTGACTATTAATTTTGAGCGCTTTTCAACTTTTTCAGGTGTGGATTTATTTATTCCTTTTAGTGTCTCTAAGTTTTTTTA TGCATCTTTGTGTTTTGCTATTGGCACTCTTATTTATCAGGTTAGGTGTCCTTTGATGATTAAGCAGAACTCAAGTTTGA GCGATTTTGAAAGCGAAGGGAAAACTATGCAGCACATTATTGACTACCTTCAGTTATCTTCATCAAAAATAGGGTCTAAA GTTTCTTGTGATGATATCTTTAATTTTGTAAAAGACTTTGATAAGACTAAGGATGTAGATTGTAAAGCGGTGGTTGGTAT TTTAAATCGGAAGAGGGAGGTTGAGTCAGTTTTTATTGATTCTGAACTTAGAGCTGACTTTTTTTGGAAAACTTATAATA AGCTTAATTGTCAGTTCCGTATCTCAGCAGTTTTTTGTTTTATCTTTTACTTTCTTGGTTTGTCTTTTTTATTCGTGAGT GCCATTGTAAATGTTTTTTATGCACTGAAACTATTTATTTGCGAGGTATGA
Upstream 100 bases:
>100_bases GGAAGTTTGAGGTATGAGTATTCTTTGGAGTGATTTGCGGGTTTTAGGTAATAGTAAGTTGATTACAAGTAATTACTTTT GGATATTTTTAATCCCGTTT
Downstream 100 bases:
>100_bases GTGTGAATAAGTTTTAGAGATGGTTGTTAATGTTTTTAACTAGGGGGTATAGTGTGCGTAATAAAGAAATTGATAATAGG TTGGGTGAGTTATGTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTINFERFSTFSGVDLFIPFSVSKFFYASLCFAIGTLIYQVRCPLMIKQNSSLSDFESEGKTMQHIIDYLQLSSSKIGSK VSCDDIFNFVKDFDKTKDVDCKAVVGILNRKREVESVFIDSELRADFFWKTYNKLNCQFRISAVFCFIFYFLGLSFLFVS AIVNVFYALKLFICEV
Sequences:
>Translated_176_residues MTINFERFSTFSGVDLFIPFSVSKFFYASLCFAIGTLIYQVRCPLMIKQNSSLSDFESEGKTMQHIIDYLQLSSSKIGSK VSCDDIFNFVKDFDKTKDVDCKAVVGILNRKREVESVFIDSELRADFFWKTYNKLNCQFRISAVFCFIFYFLGLSFLFVS AIVNVFYALKLFICEV >Mature_175_residues TINFERFSTFSGVDLFIPFSVSKFFYASLCFAIGTLIYQVRCPLMIKQNSSLSDFESEGKTMQHIIDYLQLSSSKIGSKV SCDDIFNFVKDFDKTKDVDCKAVVGILNRKREVESVFIDSELRADFFWKTYNKLNCQFRISAVFCFIFYFLGLSFLFVSA IVNVFYALKLFICEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20358; Mature: 20227
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINFERFSTFSGVDLFIPFSVSKFFYASLCFAIGTLIYQVRCPLMIKQNSSLSDFESEG CCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHCC KTMQHIIDYLQLSSSKIGSKVSCDDIFNFVKDFDKTKDVDCKAVVGILNRKREVESVFID HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC SELRADFFWKTYNKLNCQFRISAVFCFIFYFLGLSFLFVSAIVNVFYALKLFICEV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TINFERFSTFSGVDLFIPFSVSKFFYASLCFAIGTLIYQVRCPLMIKQNSSLSDFESEG CCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHCC KTMQHIIDYLQLSSSKIGSKVSCDDIFNFVKDFDKTKDVDCKAVVGILNRKREVESVFID HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC SELRADFFWKTYNKLNCQFRISAVFCFIFYFLGLSFLFVSAIVNVFYALKLFICEV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA