Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963116

Identifier: 157963116

GI number: 157963116

Start: 4041469

End: 4041918

Strand: Reverse

Name: 157963116

Synonym: Spea_3300

Alternate gene names: NA

Gene position: 4041918-4041469 (Counterclockwise)

Preceding gene: 157963117

Following gene: 157963114

Centisome position: 78.11

GC content: 45.78

Gene sequence:

>450_bases
ATGACACAAATTGATATGCAAGAACAACTTCCTATTACGATTAGTGCCGATAGCGGCTTTTCTAGTTCGCTTAAACCGTT
ATTGATTGAGCTGGAAATGTGGATCAACTTTCAGGCGTTGAAAGCGGATTGGTATGGCGATGAAACCTGTATCTTGGCTT
TCGATTTTACCTTGGTTAGAAGCTTGGAAGATAAAGGGCTGCAAGCGGGTGCTGTGGCTGTTAGTGAAAAGAGTGGGAGC
GCTGCGGCGGGAAAAGAGTGGATCTCGGGTGATGGTTATGCCTATTGTTATGACAGCACTAGCTTAAAGACCACGGCTTT
TATTGCAGTTGCTGACTTGCTTGAGGCTGGTGTTGGGATAGAGCAAGCGATTAAGGCTAGATTGATAGCGGTAGCTAATG
AGATTGCTAAGTCTGTGGCAAGAGGGCACAGGTTGTTGGGTTTGGTTTAG

Upstream 100 bases:

>100_bases
GGCAGATTTGATAGTGGGCTGTTGCAACTAATGGCATTAGCCAGCAGAATCAGCTTTAAACCACTTGATTTAAACCATAG
CAAAGTGACGACAAATACCG

Downstream 100 bases:

>100_bases
AGTAGCTCGGTAATACGCTCTTGAATAGATGTGAACTCAGAGGTTTGAAGAGTGTCTGCTATTCCGGCTCTGATAGGGTT
TAAATCCACGTACATCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTQIDMQEQLPITISADSGFSSSLKPLLIELEMWINFQALKADWYGDETCILAFDFTLVRSLEDKGLQAGAVAVSEKSGS
AAAGKEWISGDGYAYCYDSTSLKTTAFIAVADLLEAGVGIEQAIKARLIAVANEIAKSVARGHRLLGLV

Sequences:

>Translated_149_residues
MTQIDMQEQLPITISADSGFSSSLKPLLIELEMWINFQALKADWYGDETCILAFDFTLVRSLEDKGLQAGAVAVSEKSGS
AAAGKEWISGDGYAYCYDSTSLKTTAFIAVADLLEAGVGIEQAIKARLIAVANEIAKSVARGHRLLGLV
>Mature_148_residues
TQIDMQEQLPITISADSGFSSSLKPLLIELEMWINFQALKADWYGDETCILAFDFTLVRSLEDKGLQAGAVAVSEKSGSA
AAGKEWISGDGYAYCYDSTSLKTTAFIAVADLLEAGVGIEQAIKARLIAVANEIAKSVARGHRLLGLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15962; Mature: 15831

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIDMQEQLPITISADSGFSSSLKPLLIELEMWINFQALKADWYGDETCILAFDFTLVR
CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEHEEEEEEEEECCCCCCEEEEEEHHHHHH
SLEDKGLQAGAVAVSEKSGSAAAGKEWISGDGYAYCYDSTSLKTTAFIAVADLLEAGVGI
HHHHCCCCCCEEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCH
EQAIKARLIAVANEIAKSVARGHRLLGLV
HHHHHHHHHHHHHHHHHHHHHCHHHCCCC
>Mature Secondary Structure 
TQIDMQEQLPITISADSGFSSSLKPLLIELEMWINFQALKADWYGDETCILAFDFTLVR
CCCCCCCCCCEEEECCCCCCCCCCCEEEEEEHEEEEEEEEECCCCCCEEEEEEHHHHHH
SLEDKGLQAGAVAVSEKSGSAAAGKEWISGDGYAYCYDSTSLKTTAFIAVADLLEAGVGI
HHHHCCCCCCEEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCH
EQAIKARLIAVANEIAKSVARGHRLLGLV
HHHHHHHHHHHHHHHHHHHHHCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA