Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963069

Identifier: 157963069

GI number: 157963069

Start: 3989316

End: 3990227

Strand: Reverse

Name: 157963069

Synonym: Spea_3252

Alternate gene names: NA

Gene position: 3990227-3989316 (Counterclockwise)

Preceding gene: 157963070

Following gene: 157963067

Centisome position: 77.11

GC content: 48.25

Gene sequence:

>912_bases
ATGCGCGGAGTGTTGTATCTATTTATTGCCACCTTGTTGGCTGCTGTGGGCTGGGTTGCCTCTAAAATTGTGGTGCAATC
TGTGCCGGGGGAGTTATTTATTGGCTCCCGCTTTCTATTGGCAAGTTTAGTCTTGCTGCCATTTTGCTATAAGAGCCTGC
TGAAACTCAGTATGAAACAGTTGCTGTCGGCCTGTGGTGTTGGCGTCTTTCTCGGACTCGCACTGCAAGTTTGGATCTAT
GCGGTCTCGATTAGTGACAGCTTGTCTGAGGGGGCGTTTATCATGAGTTTGGCAATGATTATTGCACCGCTGACCGCTTG
GATACTGTTCCAAGCTAAACCTAATCGTGCCTTTTGGATAGCCTTGCCTGTGAGTACGACGGGCATGATGCTACTGAGCC
TAACTAATGGCTGGAAGATGGAGTCGAGTCAGTTGCTGTTCTTGCTGGCATCGGCATTGCTTTCTGTACATTTCGTGATG
AATAAGCGCATCAGCGGTAATCTAAAGCCACTGGTTTCTATCTGCTTACAGTTATTTGTGGTCGGCTTAGTGGGCTTGGG
CTATGCCTCGATTACTCAGCCTCACAGCATAGCGTTTTCTGGAGAGCTAATTAGTTGGTTTGCCATTTCGACCCTGATTG
CCACCTCTGTACGTTACCTATTGCAGACTATGGGGCAGTATAAGGTGAGCATGGAAACCGCAGCGCTATTGATGATCTTA
GAGCCTATTTGGACCCTGCTCTTGAGTATGACTCTGTTGGGAGAGACGCTAGAGCCACAAAAGCTTATTGGCGGCGGGGT
GATCTTCTTGTCACTGTTTCTTTATATCAAACTGTCTCGACGCTTTGCGAAGGCAGAGCAAGCAAAGGCGGTACAAGTAG
AGACCGAACAAGCTGAGACGGTAAAAGCATAG

Upstream 100 bases:

>100_bases
GGTTGCTATTTTTGTTTTTAGCGCAGCGCATTTTATTCAATGGCGCTGTGTAAAGATCCTATTTCAATTGGCTATAAGCC
CCTATTTAAGAGTGCTATTG

Downstream 100 bases:

>100_bases
AAGGTACTAGATCCTAGGAAAAGCTGAGAAAGGTCCTAGGTGCTAGGAAGAGCTAAGACGATAACAGACGTACAGCCTGC
GGCCTAGGGAACGTGACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: RhaT Protein; DMT Family Permease; DMT Superfamily Drug/Metabolite Transporter; Permease DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein; Integral Membrane Protein Transmembrane Transporter

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQLLSACGVGVFLGLALQVWIY
AVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWIALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVM
NKRISGNLKPLVSICLQLFVVGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL
EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAETVKA

Sequences:

>Translated_303_residues
MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQLLSACGVGVFLGLALQVWIY
AVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWIALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVM
NKRISGNLKPLVSICLQLFVVGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL
EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAETVKA
>Mature_303_residues
MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQLLSACGVGVFLGLALQVWIY
AVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWIALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVM
NKRISGNLKPLVSICLQLFVVGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL
EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAETVKA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33062; Mature: 33062

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH
LLSACGVGVFLGLALQVWIYAVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEE
ALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVMNKRISGNLKPLVSICLQLFV
EEECCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL
HHHHHCCHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAET
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHH
VKA
CCC
>Mature Secondary Structure
MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH
LLSACGVGVFLGLALQVWIYAVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEE
ALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVMNKRISGNLKPLVSICLQLFV
EEECCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL
HHHHHCCHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAET
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHH
VKA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA