| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962591
Identifier: 157962591
GI number: 157962591
Start: 3384155
End: 3385714
Strand: Reverse
Name: 157962591
Synonym: Spea_2770
Alternate gene names: NA
Gene position: 3385714-3384155 (Counterclockwise)
Preceding gene: 157962592
Following gene: 157962590
Centisome position: 65.43
GC content: 47.18
Gene sequence:
>1560_bases ATGATGAGAAGACATGTAACAGAGCATGGTCGCCGAACACTAATCGCCAGTACGCTGATAGCGCTTATGGTTGGTTGTGG TAGCGATAACAATGATAATAACGATAATAATGAAGGTGTTAATCTTCCTCCCGTGGCAGGCAGTTTATCTGTTGTTGCCG TCATCGGTGAGGAAACCGCTATTGATGTGCTGGCCGAGTCCAGCGATCCGGAGGGCGGTGAGCTAACATTGTCAGAGGCT AAAGTGGTAAATGGCGTCGGCGAAGTGCGTATGCAAGATAACCAACTTTGGTTTGAATCAGATACTTATGGCTTAGCCCA AATTGAGTATGTCATTCTTGACGATCAAAGCAATGAGGGGCGAGCGAAGGTTGATGTGGAAGTGAAGGCCAGTTTGCGCG ATTACGTTGGTACTGATACTTGCCTTAGTTGCCATACAAATAAAGCGAGCTTCCAGCAGACCGGTCATAACTTTAAGTTT ACTAAAGTCGAAAAAGATCAGATGCCGGAGTTTCCTTTCACCACCATGGAGGGGATATTTGACCATCTAGAGGGGGTTGA GAATAGTTTAGGGGCACCAATGAGCTGGGCTGATGTTAGCTATGTGCTCGGTGGATACCAGCGACAAGGGATATTGCTGG ATAAAAATGGTTATATGGTTAATGGTACTAAAGCTATGGTAGACGTGGTGCCGACAGGGGGCGTGATCACCGCAGATAGA ATGGTACCGTTTGCGCCTGGTGCTGGTGCAGATGCTATGCCTTATAAATGTGGTACTTGTCATAACACTGGCTGGCGAGA TTACACTTCTGAGCCAGGCGATCACCGTAATCGTAATCGTCAGGATGATTTAATCGGCATGGAAGGAACCTTTGCTCTGC AAGGCGTGCAATGTGAGGCGTGCCACGGTGCTGGTAGCGATCACGTTAAGAAACCAAGTAAAGATAATATCACTCGTAAA GCAGAGGGTCGTCTAACCGCGGACTTGACGGCACTGAATATGGCCTATGGAGAGCCTGTAGCTTGTGGTGAATGTCATAC TAAAGAGGGGGAGCGGTATTACCCAAGCTATCAGACACCTTATAATGCTGACTTTGGCGGAGACACAGTTGGCGGTCGCT ATAAGGAATACTTTGAAGAAGGTCGGACAGCAGGAGACGCCTTAATGGCTATCGATCCTGACACAGGTATACCTAATGGG TCGAAGCGCCATCTTCACTGTGCAGATTGCCACAATCCACATCAATCTACTAACTTCCAAGATAAACCAGGACACGAACA GGCATTGATCACTGAGTGTCAAGATTGTCATGGGGTCAAGGAGTTTGCAGATGGAGCGACTAAAGTTCATGCCGCAGTTG CAGATTGTACAGATTGTCATATGCCAATCAACTCACATCTCTTTAAAATTGATCTGTCGGAACCTTCTGACAGCCCTTAT CATTTCTCGAAGGATGGTAAGTTCCGTCAGCCTTGGTTGAGACCGTCACAGTCGTGTAAAGCGTGTCATGCTGATGACTA TGATGATAGAGCCTCACGAGTAGAGCTAATGCACCGTTAA
Upstream 100 bases:
>100_bases GCTGAATTGACAATTCCGGGACCATAAATGACCTGTATTGATTCTTTACCCTTTATTACTCTTTTACTGCGAAAGCAAAA TAAAATTAAATGGAGTTATG
Downstream 100 bases:
>100_bases ACTGTTCACTTTAGGGCACCGGACAAGGCCGGTGTCCTTGTACGTGAAAGTGGAATCCGTTACCATTTTAAATGGAGATA AATATAATGGTTTCTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MMRRHVTEHGRRTLIASTLIALMVGCGSDNNDNNDNNEGVNLPPVAGSLSVVAVIGEETAIDVLAESSDPEGGELTLSEA KVVNGVGEVRMQDNQLWFESDTYGLAQIEYVILDDQSNEGRAKVDVEVKASLRDYVGTDTCLSCHTNKASFQQTGHNFKF TKVEKDQMPEFPFTTMEGIFDHLEGVENSLGAPMSWADVSYVLGGYQRQGILLDKNGYMVNGTKAMVDVVPTGGVITADR MVPFAPGAGADAMPYKCGTCHNTGWRDYTSEPGDHRNRNRQDDLIGMEGTFALQGVQCEACHGAGSDHVKKPSKDNITRK AEGRLTADLTALNMAYGEPVACGECHTKEGERYYPSYQTPYNADFGGDTVGGRYKEYFEEGRTAGDALMAIDPDTGIPNG SKRHLHCADCHNPHQSTNFQDKPGHEQALITECQDCHGVKEFADGATKVHAAVADCTDCHMPINSHLFKIDLSEPSDSPY HFSKDGKFRQPWLRPSQSCKACHADDYDDRASRVELMHR
Sequences:
>Translated_519_residues MMRRHVTEHGRRTLIASTLIALMVGCGSDNNDNNDNNEGVNLPPVAGSLSVVAVIGEETAIDVLAESSDPEGGELTLSEA KVVNGVGEVRMQDNQLWFESDTYGLAQIEYVILDDQSNEGRAKVDVEVKASLRDYVGTDTCLSCHTNKASFQQTGHNFKF TKVEKDQMPEFPFTTMEGIFDHLEGVENSLGAPMSWADVSYVLGGYQRQGILLDKNGYMVNGTKAMVDVVPTGGVITADR MVPFAPGAGADAMPYKCGTCHNTGWRDYTSEPGDHRNRNRQDDLIGMEGTFALQGVQCEACHGAGSDHVKKPSKDNITRK AEGRLTADLTALNMAYGEPVACGECHTKEGERYYPSYQTPYNADFGGDTVGGRYKEYFEEGRTAGDALMAIDPDTGIPNG SKRHLHCADCHNPHQSTNFQDKPGHEQALITECQDCHGVKEFADGATKVHAAVADCTDCHMPINSHLFKIDLSEPSDSPY HFSKDGKFRQPWLRPSQSCKACHADDYDDRASRVELMHR >Mature_519_residues MMRRHVTEHGRRTLIASTLIALMVGCGSDNNDNNDNNEGVNLPPVAGSLSVVAVIGEETAIDVLAESSDPEGGELTLSEA KVVNGVGEVRMQDNQLWFESDTYGLAQIEYVILDDQSNEGRAKVDVEVKASLRDYVGTDTCLSCHTNKASFQQTGHNFKF TKVEKDQMPEFPFTTMEGIFDHLEGVENSLGAPMSWADVSYVLGGYQRQGILLDKNGYMVNGTKAMVDVVPTGGVITADR MVPFAPGAGADAMPYKCGTCHNTGWRDYTSEPGDHRNRNRQDDLIGMEGTFALQGVQCEACHGAGSDHVKKPSKDNITRK AEGRLTADLTALNMAYGEPVACGECHTKEGERYYPSYQTPYNADFGGDTVGGRYKEYFEEGRTAGDALMAIDPDTGIPNG SKRHLHCADCHNPHQSTNFQDKPGHEQALITECQDCHGVKEFADGATKVHAAVADCTDCHMPINSHLFKIDLSEPSDSPY HFSKDGKFRQPWLRPSQSCKACHADDYDDRASRVELMHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56861; Mature: 56861
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRHVTEHGRRTLIASTLIALMVGCGSDNNDNNDNNEGVNLPPVAGSLSVVAVIGEETA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCE IDVLAESSDPEGGELTLSEAKVVNGVGEVRMQDNQLWFESDTYGLAQIEYVILDDQSNEG EEEEECCCCCCCCEEEECHHHHHCCCCCEEEECCEEEEECCCCCEEEEEEEEEECCCCCC RAKVDVEVKASLRDYVGTDTCLSCHTNKASFQQTGHNFKFTKVEKDQMPEFPFTTMEGIF CEEEEEEEEHHHHHHCCCCCEEEECCCCHHHHHCCCCEEEEEECHHCCCCCCCHHHHHHH DHLEGVENSLGAPMSWADVSYVLGGYQRQGILLDKNGYMVNGTKAMVDVVPTGGVITADR HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEECCCCEEEECCEEEEEEECCCCEEEECC MVPFAPGAGADAMPYKCGTCHNTGWRDYTSEPGDHRNRNRQDDLIGMEGTFALQGVQCEA EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECEEEEE CHGAGSDHVKKPSKDNITRKAEGRLTADLTALNMAYGEPVACGECHTKEGERYYPSYQTP CCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCC YNADFGGDTVGGRYKEYFEEGRTAGDALMAIDPDTGIPNGSKRHLHCADCHNPHQSTNFQ CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCC DKPGHEQALITECQDCHGVKEFADGATKVHAAVADCTDCHMPINSHLFKIDLSEPSDSPY CCCCCCHHHHHHHHHHCCHHHHHCCHHEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCE HFSKDGKFRQPWLRPSQSCKACHADDYDDRASRVELMHR EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MMRRHVTEHGRRTLIASTLIALMVGCGSDNNDNNDNNEGVNLPPVAGSLSVVAVIGEETA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCE IDVLAESSDPEGGELTLSEAKVVNGVGEVRMQDNQLWFESDTYGLAQIEYVILDDQSNEG EEEEECCCCCCCCEEEECHHHHHCCCCCEEEECCEEEEECCCCCEEEEEEEEEECCCCCC RAKVDVEVKASLRDYVGTDTCLSCHTNKASFQQTGHNFKFTKVEKDQMPEFPFTTMEGIF CEEEEEEEEHHHHHHCCCCCEEEECCCCHHHHHCCCCEEEEEECHHCCCCCCCHHHHHHH DHLEGVENSLGAPMSWADVSYVLGGYQRQGILLDKNGYMVNGTKAMVDVVPTGGVITADR HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEECCCCEEEECCEEEEEEECCCCEEEECC MVPFAPGAGADAMPYKCGTCHNTGWRDYTSEPGDHRNRNRQDDLIGMEGTFALQGVQCEA EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECEEEEE CHGAGSDHVKKPSKDNITRKAEGRLTADLTALNMAYGEPVACGECHTKEGERYYPSYQTP CCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCC YNADFGGDTVGGRYKEYFEEGRTAGDALMAIDPDTGIPNGSKRHLHCADCHNPHQSTNFQ CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCC DKPGHEQALITECQDCHGVKEFADGATKVHAAVADCTDCHMPINSHLFKIDLSEPSDSPY CCCCCCHHHHHHHHHHCCHHHHHCCHHEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCE HFSKDGKFRQPWLRPSQSCKACHADDYDDRASRVELMHR EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA