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The map label for this gene is ybiT [H]

Identifier: 157962592

GI number: 157962592

Start: 3386233

End: 3387801

Strand: Reverse

Name: ybiT [H]

Synonym: Spea_2771

Alternate gene names: 157962592

Gene position: 3387801-3386233 (Counterclockwise)

Preceding gene: 157962593

Following gene: 157962591

Centisome position: 65.47

GC content: 43.59

Gene sequence:

>1569_bases
ATGCAGTTTGGCGCCAAGCCACTGTTTGAAAACATCTCAATTAAGTTTGGCGGCGGAAACAGATACGGTCTGATCGGCGC
GAACGGTTGTGGTAAATCAACCTTCATGAAGATCCTTGCTGGTGATTTAGAGCCAACTGGCGGTAACGTATCATTAGACG
TGAACGAGCGTTTGGGTAAGTTGAGTCAGAACCAGTTTGGTTACGAAGAGTTCAACGTTGTTGACACTGTAATCATGGGC
CACGCTGAACTTTGGAAAGTGAAGCAAGAACGTGACCGTATTTATTCTTTGCCAGAAATGTCTGAAGAAGATGGTATTAA
AGTAGCTGATTTAGAAATGGAATTTGCTGAGATGGACGGTTATACCGCTGAATCTCGCGCAGGTGAGTTACTAATGGGCG
TGGGTATTGGTGTTGAGCAACATTTCGGTCTAATGAGCGAAATCGCACCAGGCTTTAAGTTACGTGTATTGTTGGCTCAG
GCGCTATTTAGCGATCCAGATGTACTGCTTCTTGACGAACCAACCAACAACTTGGACATCGACACTATTCGTTGGTTGCA
AGAGATGCTTAACCAGCGTAACAGCACCATGATTATCATTTCGCACGATAGATATTTCTTGAACTCTGTTTGTACGCATA
TGGCTGACTTGGATTACGGCGATATCCGTGTATTCCCAGGTAACTATGACGAGTACATGATGGCTGCACAGCAGTCACGT
GAGCGTTTGATGTCTGATAACGCTAAGAAGAAGGCACAAATTGCCGAGCTTCAAGGATTCGTTGCACGTTTCTCTGCTAA
CGCTTCTAAAGCTAAGCAAGCAACATCACGTGCCAAGCTAATCGATAAAATTAAGCTTGATGAAATTAAAGCGTCTAGCC
GTGTTAATCCATTCATTCGTTTCGAGCAAGAGAAGAAACTATTCCGTAATGCTTTGATTGTTGAAGACTTAAGCAAAGGC
TTTGATAAGCCATTATTTAAAGATCTAAACATCATTGCTGAAGTGGGCGAGCGTATCGCGATCTTGGGTGACAACGGTGT
GGGTAAAACTACATTGTTACGTACCTTAGTACACGATATCCCACAAGACTCGGGTACGATTCAGTGGTCTGAAAACTCTG
CTATTGGTTACTACGCACAGGATCACGAGTCAGATTTCGCTAACGACATGACTTTGTTTGAGTGGATGAGCCAGTGGCGC
AAACCTGAAGATGACGATCAATCAGTACGTGGTTACTTAGGCCGTATGCTGTTTGGTTCTGACGATATCAAGAAGTCAGT
TAAAGTACTATCTGGTGGTGAAAAGGGCCGCATGTTGTTTGGTAAGCTTATTATGCAAAAGCCAAACATCCTGCTATTGG
ACGAGCCAACCAACCACATGGATATGGAATCAATCGAGTCATTGAACAACGCATTAGAGATGTACGAAGGTACACTAGTG
TTCGTCAGTCATGACCGTGCATTCGTATCATCATTGGCGAACCGTATTATTGAAATCACACCAAATGGTGTGAATGATTT
CAAGGGAACTTATGATGAGTTCCTAACGAGCAAAGGTATCGAAGGTTAA

Upstream 100 bases:

>100_bases
ATCTCGGTATCGTTCTACTGGTTTTTGTTTTATCTATGATGACGTTAATCATATAACCAAGAGCGGAATTGATACCTTGA
TCACTACAGCTAATATCACC

Downstream 100 bases:

>100_bases
TTTTTATTGACCTTGTTTTTAGCTTTATGAAAGAGAAGCCCGAGAAATCGGGCTTTTTTGTGTCTGGAACACTTATGTCA
CTCTTGGTTTTAGGAGCGTC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGKLSQNQFGYEEFNVVDTVIMG
HAELWKVKQERDRIYSLPEMSEEDGIKVADLEMEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGFKLRVLLAQ
ALFSDPDVLLLDEPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEYMMAAQQSR
ERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIRFEQEKKLFRNALIVEDLSKG
FDKPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTLFEWMSQWR
KPEDDDQSVRGYLGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNALEMYEGTLV
FVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG

Sequences:

>Translated_522_residues
MQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGKLSQNQFGYEEFNVVDTVIMG
HAELWKVKQERDRIYSLPEMSEEDGIKVADLEMEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGFKLRVLLAQ
ALFSDPDVLLLDEPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEYMMAAQQSR
ERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIRFEQEKKLFRNALIVEDLSKG
FDKPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTLFEWMSQWR
KPEDDDQSVRGYLGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNALEMYEGTLV
FVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG
>Mature_522_residues
MQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGKLSQNQFGYEEFNVVDTVIMG
HAELWKVKQERDRIYSLPEMSEEDGIKVADLEMEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGFKLRVLLAQ
ALFSDPDVLLLDEPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEYMMAAQQSR
ERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIRFEQEKKLFRNALIVEDLSKG
FDKPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTLFEWMSQWR
KPEDDDQSVRGYLGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNALEMYEGTLV
FVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=525, Percent_Identity=29.3333333333333, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI27881506, Length=531, Percent_Identity=28.4369114877589, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI10947137, Length=531, Percent_Identity=28.4369114877589, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI10947135, Length=532, Percent_Identity=28.5714285714286, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI69354671, Length=532, Percent_Identity=28.5714285714286, Blast_Score=199, Evalue=7e-51,
Organism=Homo sapiens, GI9961252, Length=209, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI4505771, Length=209, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1787041, Length=522, Percent_Identity=77.5862068965517, Blast_Score=864, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=516, Percent_Identity=32.5581395348837, Blast_Score=279, Evalue=3e-76,
Organism=Escherichia coli, GI1787182, Length=538, Percent_Identity=30.1115241635688, Blast_Score=225, Evalue=6e-60,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=30.1343570057582, Blast_Score=215, Evalue=6e-57,
Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=30.1369863013699, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788165, Length=218, Percent_Identity=25.6880733944954, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1786319, Length=279, Percent_Identity=23.2974910394265, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081709, Length=258, Percent_Identity=27.1317829457364, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=26.1802575107296, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786698, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI48994943, Length=238, Percent_Identity=27.3109243697479, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790525, Length=219, Percent_Identity=25.5707762557078, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=522, Percent_Identity=30.0766283524904, Blast_Score=245, Evalue=4e-65,
Organism=Caenorhabditis elegans, GI17553372, Length=531, Percent_Identity=30.6967984934087, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17559834, Length=527, Percent_Identity=28.2732447817837, Blast_Score=213, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI193202349, Length=216, Percent_Identity=28.7037037037037, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=528, Percent_Identity=31.25, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=30.0556586270872, Blast_Score=237, Evalue=3e-63,
Organism=Saccharomyces cerevisiae, GI6323278, Length=426, Percent_Identity=25.3521126760563, Blast_Score=122, Evalue=9e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=424, Percent_Identity=25.4716981132075, Blast_Score=117, Evalue=6e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=435, Percent_Identity=26.6666666666667, Blast_Score=112, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=30, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24642252, Length=532, Percent_Identity=29.8872180451128, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI18859989, Length=532, Percent_Identity=29.8872180451128, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24641342, Length=523, Percent_Identity=27.7246653919694, Blast_Score=215, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58628; Mature: 58628

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGK
CCCCCCCHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCC
LSQNQFGYEEFNVVDTVIMGHAELWKVKQERDRIYSLPEMSEEDGIKVADLEMEFAEMDG
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHCCC
YTAESRAGELLMGVGIGVEQHFGLMSEIAPGFKLRVLLAQALFSDPDVLLLDEPTNNLDI
CCCHHCCCCEEEEECCCHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEYMMAAQQSR
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
ERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIR
HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
FEQEKKLFRNALIVEDLSKGFDKPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDI
EHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHC
PQDSGTIQWSENSAIGYYAQDHESDFANDMTLFEWMSQWRKPEDDDQSVRGYLGRMLFGS
CCCCCEEEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNALEMYEGTLV
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
FVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG
EEECCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGK
CCCCCCCHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCC
LSQNQFGYEEFNVVDTVIMGHAELWKVKQERDRIYSLPEMSEEDGIKVADLEMEFAEMDG
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHCCC
YTAESRAGELLMGVGIGVEQHFGLMSEIAPGFKLRVLLAQALFSDPDVLLLDEPTNNLDI
CCCHHCCCCEEEEECCCHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEYMMAAQQSR
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
ERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIR
HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
FEQEKKLFRNALIVEDLSKGFDKPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDI
EHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHC
PQDSGTIQWSENSAIGYYAQDHESDFANDMTLFEWMSQWRKPEDDDQSVRGYLGRMLFGS
CCCCCEEEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNALEMYEGTLV
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
FVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG
EEECCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]