| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yeiJ [C]
Identifier: 157962584
GI number: 157962584
Start: 3375598
End: 3376806
Strand: Reverse
Name: yeiJ [C]
Synonym: Spea_2763
Alternate gene names: 157962584
Gene position: 3376806-3375598 (Counterclockwise)
Preceding gene: 157962585
Following gene: 157962575
Centisome position: 65.26
GC content: 47.97
Gene sequence:
>1209_bases ATGCAGTTGTTGATCAGTTTAGTCGGAATTTCTTTTCTCGTTCTCTGTGGGTGGATTTTTTCTGAAAATCGCCATGCGAT TAAGTGGCGCACGGTACTTGGGGCGTTTGCCTTGCAAGCTGCGTTAGCTGCCTTAGTTTTGTATGTGCCTATGGGCCAAA ACATTCTAGGCTCTGTGAGTCAGGGCGTTGCCTCTGTATTAAGTTTTGCCGATGAGGGAATTAACTTCCTGTTTGGCGAC CTTGCCACCAACAGCTTTGTGTTCGCTATTCGTGTGCTTCCTCTAGTTATCTTTATTAGTGCCTTAATCTCTATGTTGTA TTACTTCGGTATTATGCAGTGGGTGATTAAAGTGATGGGGGGCGCACTGCAAAAGTTACTAGGGATCAGCCGTGCAGAAT CATTGGTGACCACGGGCAATATCTTCTTAAGCCAAGGCGAATCGCCTTTACTAGTTAAGCCATTCTTACCTAAGATGACT CGCTCAGAGCTATTTGCGGTGATGACGGGCGGTATGGCGTCGGTGGCTGGCAGTGTGTTAGGTGGTTATGCGGGTCTGGG GGTCGAGCTTAAATACTTGATTGCGGCAAGCTTTATGGCGGCGCCAGGTAGCTTGATGATGGCAAAGCTATTGGTGCCTG AAACAGGCTATCCTGAGTCGCAGCAAAGCGTCGATATGAGTCAGAGTGAACACAGTAATGTGGTTGATGCACTTGCCTCC GGTGCGATGAATGGTATGCGCGTGGCTGTGGCTATCGGTACCATGTTATTAGCCTTTATCAGTGTGATTGCCATGTTTAA TGCGGGTCTTGAGCAAGTGGGCACTTGGTTTAACCTTGAAGGCGTGACCATGCAAAGCTTGCTGGGTTACATTTTTGCAC CAGTGGCATTTTTAATTGGTGTGCCAGCCAACGAGATGATGCAGGCGGGAAGCTTTATCGGTCAAAAGCTGATCCTTAAC GAGTTCGTGGCCTTTATGGATTTCACCGAAGTTAAAGAGCAACTATCGATGCACTCTCAGGTGATCATCACCTTCGCATT ATGTGGCTTTGCTAACATAGGCTCGATTGCGATTCAGCTAGGCAGTATCGGTGTGATGGCACCAGAGCGTCGCAGCGAAG TGGCAAACCTTGGTTTAAAAGCGGTACTTGCCGCGACTCTTGCAAACTTAATGAGCGCCGCGTTAGCTGGTATTTTCATT AGCCTATAA
Upstream 100 bases:
>100_bases CGCTTTTATTAAAGCATTCCCCATCTTCTATACATTTACGACCGCCTGCTACTTAACTCTTTCTATATAAACATTTTATA TTTAAAAAATGAGATAAATT
Downstream 100 bases:
>100_bases TTTGTCTGTGATTGTCAGTTGATTAAAGCGTTATTCGAGTCCAGCAACAAAAAGAGCAGCTTAGCTGCTCTTTTTGTTTG GTTCTTTTTCGGGGGCAGAG
Product: nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVSQGVASVLSFADEGINFLFGD LATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMGGALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMT RSELFAVMTGGMASVAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIGVPANEMMQAGSFIGQKLILN EFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQLGSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFI SL
Sequences:
>Translated_402_residues MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVSQGVASVLSFADEGINFLFGD LATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMGGALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMT RSELFAVMTGGMASVAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIGVPANEMMQAGSFIGQKLILN EFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQLGSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFI SL >Mature_402_residues MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVSQGVASVLSFADEGINFLFGD LATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMGGALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMT RSELFAVMTGGMASVAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIGVPANEMMQAGSFIGQKLILN EFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQLGSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFI SL
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=417, Percent_Identity=36.9304556354916, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI42542381, Length=412, Percent_Identity=36.6504854368932, Blast_Score=269, Evalue=3e-72, Organism=Homo sapiens, GI227116277, Length=414, Percent_Identity=34.0579710144928, Blast_Score=266, Evalue=3e-71, Organism=Escherichia coli, GI1788485, Length=418, Percent_Identity=42.1052631578947, Blast_Score=322, Evalue=2e-89, Organism=Escherichia coli, GI1788488, Length=415, Percent_Identity=42.1686746987952, Blast_Score=314, Evalue=7e-87, Organism=Escherichia coli, GI1788737, Length=380, Percent_Identity=31.8421052631579, Blast_Score=190, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17560276, Length=400, Percent_Identity=33.25, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71991794, Length=403, Percent_Identity=33.4987593052109, Blast_Score=211, Evalue=4e-55, Organism=Caenorhabditis elegans, GI25146537, Length=208, Percent_Identity=35.0961538461538, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI45552517, Length=402, Percent_Identity=37.5621890547264, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI19921868, Length=402, Percent_Identity=37.5621890547264, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI45552519, Length=402, Percent_Identity=37.5621890547264, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI281360430, Length=399, Percent_Identity=36.5914786967419, Blast_Score=251, Evalue=8e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 42586; Mature: 42586
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVS CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QGVASVLSFADEGINFLFGDLATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMTRSELFAVMTGGMASVAGSVL HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH GGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHH GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCHHHHHHHHHHHHHHHHHC VPANEMMQAGSFIGQKLILNEFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFISL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVS CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QGVASVLSFADEGINFLFGDLATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMTRSELFAVMTGGMASVAGSVL HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH GGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHH GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCHHHHHHHHHHHHHHHHHC VPANEMMQAGSFIGQKLILNEFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFISL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]