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The map label for this gene is yoaA [H]

Identifier: 157962276

GI number: 157962276

Start: 2996985

End: 2998910

Strand: Reverse

Name: yoaA [H]

Synonym: Spea_2455

Alternate gene names: 157962276

Gene position: 2998910-2996985 (Counterclockwise)

Preceding gene: 157962288

Following gene: 157962274

Centisome position: 57.95

GC content: 45.33

Gene sequence:

>1926_bases
TTGAGCGTTAGATTAACACAACAAGTCGCTGCTGCATTTTCAAGCCAAGGTGTATTAGCACAATCGATTAAAGGTTTCAG
TCGTCGAGATGTGCAAGCCGAGATGGCGCACGCTGTAGCGGAGTCCATTCATAGTCGTAAAAAGTTGGTGGTTGAGGCTG
GCACAGGTGTAGGTAAAACCTTTGCTTATCTTATTCCCGCGCTATTAAGTGGCAAGAAAATCATTATTAGCACCGGAAGT
AAAAACCTGCAAGAGCAGCTATTTTACAAAGACTTACCAGCCTTGTCGGCCATGCTGAACCTAACGCCTAAAGTCGCTTT
GCTAAAAGGGCGCAATAACTATTTGTGCCAGCATTTGATGGAGAAAGAGTTATCGGGTGCGAGTTCGATGGAGACTCAGG
TATTAGACGACCTGCTCAGAATTAATCAGTGGGGAGGCCAAACGACTGACGGCGATATTGGTGGGTTGACGGCAGTAACA
GAAAACTCTCCCGCGTTGCCGTTAATCGTCAGTAGTAAAGAGAACTGCATTGGTCAGCGCTGCGACTATTTTGATGAGTG
CTTTACGCGTAAAGCCCGTAATCGAGCCATGAATGCTAAGGTTACCGTCGTCAATCATCATCTCTTTCTCGCCGATAGGA
TCATAAAAGAAACCGGTTTTGCCGAGCTATTACCCGATTCTGATGTGGTGATTTTTGACGAGGCGCATCTGCTTCCCGAT
ATCGCCGTAACTTACTTTGGTCAGCAGTGTTCAACACGGCAACTCTCTGAGCTATTCGATAAGTTAATCGATATTTATCG
TCAAGAGCTTAGAGATGCCAAGCAGATAGAAGCACTCAGTTCTCGTTGCGGCGCTATTTTAAACGAGTGGCATCAAATGT
TGTTTGAACTGGGTGATAGCGATTGGCGCCGCCTATTAGGCAACAAAGAGCTGTCTGTGTTGTCGTGGGCTTTAATTAAA
GAGATAAAAGTTCTGCAGAGTCTGTTGTTAGGCCATGTTGGACGCAGTGATAACTTAGACGACACAATTGTAAAACTGGA
GCTTATTACAAATAAGTTAGAGCTATTTTTCTTATGTGAGAACAATCAGGCCGCTTACAGTATCGATTACGGCCATCGCT
ATTTAGTGTTGCGTATTGCACCTATTGATGTGGCTAAAGAGTGTCGCAAACTGTTTGAATCTGATGTTTCGTGGATCTTC
ACTTCGGCAACCTTGCAAATTAACCGTGATTTGAGCTTGTTTACCAGACAACTGGGCTTAACTCAGTGCCAAGAGATGTT
ATTAGAGAGTCCTTTTGATTACGCTAATAATGCGCTCTTTTGCGTGCCTCGGCATTTAGCCAGTGTGAGCAACCACCATG
CTGCACTGTCACAATTTGTCGATGTCTGTGTTAAGGCGGTCAATGCCGCAAAAGGTCGGACTTTCATCCTATTTACAAGT
CACAGAATGCTAAACCTTGTTGCGCCCGCGCTGCAAAGAAGGGTTTCTTATCCACTTTTGGTGCAGGGGCAGGCAGGTAA
GCAGAGCTTATTGAAGAAGTATCGTCAGCTTGGTAATGCGGTATTGCTCGGTACTGGCGCCTTTTGGGAAGGGGTCGATG
TACGTGGTCGTCTACTGAGTTGTGTGATTATCGATAAGCTGCCCTTTATCTCACCCGACGATAATTTGTTTCGAGCGCGA
AGCGAAAGTATCGAGCGAGAGGGTAAAGATCCCTTCAGTGAAATATCCTTGCCACAAGCGGTGATCACGTTAAATCAGGG
CGTTGGCCGTTTGATCCGAGATGAGAAAGACAAAGGCGTGCTTATTTTATGTGACAACAGAATCGTTAATAAGCCTTACG
GACAGGCTTTTTTAAACTCTTTACCTCCGATGTCGAGAACTCGAGACTTAGATAAGGCGACAGCGTTTTTAGAGCGTATT
AAGTGA

Upstream 100 bases:

>100_bases
AACTGATAAAACTAAAGCTGATCTTGTAAAGCTAATTAAGATAAACTGCACCACACTTTGTAAAGCAAGCCATCTAGGCT
AATTAAAGGTTCCCTACCTC

Downstream 100 bases:

>100_bases
TCAACAAAATGGTCAAGTAGATGGCACTCAGTAAGATGAGCGCCATTAAACAGCGTCGCCGATAAGTTAGTCCTTGTGGA
TTGAGTAAGCTTGGAAACAG

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MSVRLTQQVAAAFSSQGVLAQSIKGFSRRDVQAEMAHAVAESIHSRKKLVVEAGTGVGKTFAYLIPALLSGKKIIISTGS
KNLQEQLFYKDLPALSAMLNLTPKVALLKGRNNYLCQHLMEKELSGASSMETQVLDDLLRINQWGGQTTDGDIGGLTAVT
ENSPALPLIVSSKENCIGQRCDYFDECFTRKARNRAMNAKVTVVNHHLFLADRIIKETGFAELLPDSDVVIFDEAHLLPD
IAVTYFGQQCSTRQLSELFDKLIDIYRQELRDAKQIEALSSRCGAILNEWHQMLFELGDSDWRRLLGNKELSVLSWALIK
EIKVLQSLLLGHVGRSDNLDDTIVKLELITNKLELFFLCENNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESDVSWIF
TSATLQINRDLSLFTRQLGLTQCQEMLLESPFDYANNALFCVPRHLASVSNHHAALSQFVDVCVKAVNAAKGRTFILFTS
HRMLNLVAPALQRRVSYPLLVQGQAGKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLSCVIIDKLPFISPDDNLFRAR
SESIEREGKDPFSEISLPQAVITLNQGVGRLIRDEKDKGVLILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATAFLERI
K

Sequences:

>Translated_641_residues
MSVRLTQQVAAAFSSQGVLAQSIKGFSRRDVQAEMAHAVAESIHSRKKLVVEAGTGVGKTFAYLIPALLSGKKIIISTGS
KNLQEQLFYKDLPALSAMLNLTPKVALLKGRNNYLCQHLMEKELSGASSMETQVLDDLLRINQWGGQTTDGDIGGLTAVT
ENSPALPLIVSSKENCIGQRCDYFDECFTRKARNRAMNAKVTVVNHHLFLADRIIKETGFAELLPDSDVVIFDEAHLLPD
IAVTYFGQQCSTRQLSELFDKLIDIYRQELRDAKQIEALSSRCGAILNEWHQMLFELGDSDWRRLLGNKELSVLSWALIK
EIKVLQSLLLGHVGRSDNLDDTIVKLELITNKLELFFLCENNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESDVSWIF
TSATLQINRDLSLFTRQLGLTQCQEMLLESPFDYANNALFCVPRHLASVSNHHAALSQFVDVCVKAVNAAKGRTFILFTS
HRMLNLVAPALQRRVSYPLLVQGQAGKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLSCVIIDKLPFISPDDNLFRAR
SESIEREGKDPFSEISLPQAVITLNQGVGRLIRDEKDKGVLILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATAFLERI
K
>Mature_640_residues
SVRLTQQVAAAFSSQGVLAQSIKGFSRRDVQAEMAHAVAESIHSRKKLVVEAGTGVGKTFAYLIPALLSGKKIIISTGSK
NLQEQLFYKDLPALSAMLNLTPKVALLKGRNNYLCQHLMEKELSGASSMETQVLDDLLRINQWGGQTTDGDIGGLTAVTE
NSPALPLIVSSKENCIGQRCDYFDECFTRKARNRAMNAKVTVVNHHLFLADRIIKETGFAELLPDSDVVIFDEAHLLPDI
AVTYFGQQCSTRQLSELFDKLIDIYRQELRDAKQIEALSSRCGAILNEWHQMLFELGDSDWRRLLGNKELSVLSWALIKE
IKVLQSLLLGHVGRSDNLDDTIVKLELITNKLELFFLCENNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESDVSWIFT
SATLQINRDLSLFTRQLGLTQCQEMLLESPFDYANNALFCVPRHLASVSNHHAALSQFVDVCVKAVNAAKGRTFILFTSH
RMLNLVAPALQRRVSYPLLVQGQAGKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLSCVIIDKLPFISPDDNLFRARS
ESIEREGKDPFSEISLPQAVITLNQGVGRLIRDEKDKGVLILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATAFLERIK

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=629, Percent_Identity=46.5818759936407, Blast_Score=562, Evalue=1e-161,
Organism=Escherichia coli, GI1787018, Length=710, Percent_Identity=27.0422535211268, Blast_Score=159, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 71686; Mature: 71554

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLTQQVAAAFSSQGVLAQSIKGFSRRDVQAEMAHAVAESIHSRKKLVVEAGTGVGKT
CCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH
FAYLIPALLSGKKIIISTGSKNLQEQLFYKDLPALSAMLNLTPKVALLKGRNNYLCQHLM
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
EKELSGASSMETQVLDDLLRINQWGGQTTDGDIGGLTAVTENSPALPLIVSSKENCIGQR
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHH
CDYFDECFTRKARNRAMNAKVTVVNHHLFLADRIIKETGFAELLPDSDVVIFDEAHLLPD
CHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCHHCCCCCCEEEEECCHHCHH
IAVTYFGQQCSTRQLSELFDKLIDIYRQELRDAKQIEALSSRCGAILNEWHQMLFELGDS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DWRRLLGNKELSVLSWALIKEIKVLQSLLLGHVGRSDNLDDTIVKLELITNKLELFFLCE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHEECCCEEEEEEEC
NNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESDVSWIFTSATLQINRDLSLFTRQLGL
CCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHCCHHEEEEEEEEEECCCHHHHHHHHCH
TQCQEMLLESPFDYANNALFCVPRHLASVSNHHAALSQFVDVCVKAVNAAKGRTFILFTS
HHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
HRMLNLVAPALQRRVSYPLLVQGQAGKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLS
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHH
CVIIDKLPFISPDDNLFRARSESIEREGKDPFSEISLPQAVITLNQGVGRLIRDEKDKGV
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCE
LILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATAFLERIK
EEEECCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
SVRLTQQVAAAFSSQGVLAQSIKGFSRRDVQAEMAHAVAESIHSRKKLVVEAGTGVGKT
CCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH
FAYLIPALLSGKKIIISTGSKNLQEQLFYKDLPALSAMLNLTPKVALLKGRNNYLCQHLM
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
EKELSGASSMETQVLDDLLRINQWGGQTTDGDIGGLTAVTENSPALPLIVSSKENCIGQR
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHH
CDYFDECFTRKARNRAMNAKVTVVNHHLFLADRIIKETGFAELLPDSDVVIFDEAHLLPD
CHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCHHCCCCCCEEEEECCHHCHH
IAVTYFGQQCSTRQLSELFDKLIDIYRQELRDAKQIEALSSRCGAILNEWHQMLFELGDS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DWRRLLGNKELSVLSWALIKEIKVLQSLLLGHVGRSDNLDDTIVKLELITNKLELFFLCE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHEECCCEEEEEEEC
NNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESDVSWIFTSATLQINRDLSLFTRQLGL
CCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHCCHHEEEEEEEEEECCCHHHHHHHHCH
TQCQEMLLESPFDYANNALFCVPRHLASVSNHHAALSQFVDVCVKAVNAAKGRTFILFTS
HHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
HRMLNLVAPALQRRVSYPLLVQGQAGKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLS
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHH
CVIIDKLPFISPDDNLFRARSESIEREGKDPFSEISLPQAVITLNQGVGRLIRDEKDKGV
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCE
LILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATAFLERIK
EEEECCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]