| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yeaZ [H]
Identifier: 157962274
GI number: 157962274
Start: 2995486
End: 2996202
Strand: Reverse
Name: yeaZ [H]
Synonym: Spea_2453
Alternate gene names: 157962274
Gene position: 2996202-2995486 (Counterclockwise)
Preceding gene: 157962276
Following gene: 157962273
Centisome position: 57.9
GC content: 48.54
Gene sequence:
>717_bases ATGACAAAAGATTCTAACGGTACGACACAGTTGAGCGTATTAGCGCTCGATACCTGCACTGAGTCGTGTTCTGCAGCGGT TAGCCATCAAGGCATTGTCTATAGTGAGCAAGCGGATGCGCCGCGTGAGCATAGTCAGCGTTTATTGCCTATGGTTAAAT CGGTATTGGCTCAAGCTCAGCTAAAGCTGCAAGATGTCGATGTTATTGCTTACGGAAGAGGGCCAGGCAGCTTTACCGGT ATTCGAATTTGTACCAGTATTAGCCAGGGGCTAGCGTTAGGTCAGGAGTTACCTGTTATTGGTATCTCAACGCTGGCGGC CATGGCACAATCGGCTATCGATAAAGGCGCTACTCAAGTGTTAGCCGCTATCGATGCGCGTATGGGGGAGATTTACTGGG GCCAATATATTTCGGTAGATGGGCTAGCTACCTTAGTGGATCAAGAAGTGGTCAGTGCTCCAGAGGCGATAGTGCTGAGC TTAGATGAGACTTCTACCATTGCTGCCTGTGGTACTGGTTTTGATGCCTATCCACAGTTAATCGAGCTGTTGCCTACCAT TGAGCTCTGTGAGGCCGCTAAATTCCCAGAAGCTAGATACATGTTAGCACTGGCACAAGATGGCGTAGAGAAAGGCCAAA CTACCTCTGTTGATGATTTAGCGCCAGTTTATCTGCGTGATACAGTCACATGGCAGAAATTACCAGGAAGAGAGTAG
Upstream 100 bases:
>100_bases AGTGTGGCTGGTTGAGCCTTTAATGATCGGCTGAAAGTGTGGCTTGTTTGCATTTTTTTCGACGTTAAATCATATAATTA ATAGGTTTGGTAAGTAATTC
Downstream 100 bases:
>100_bases CCTTTACCGTTAAGGAAAGCATTTTCCGAGTAAATTAAGGACGATATAATGCAGATCAACACCAGTCAACTTACTGCTAA TAAAGTTGAAGTTAACAAGT
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTKDSNGTTQLSVLALDTCTESCSAAVSHQGIVYSEQADAPREHSQRLLPMVKSVLAQAQLKLQDVDVIAYGRGPGSFTG IRICTSISQGLALGQELPVIGISTLAAMAQSAIDKGATQVLAAIDARMGEIYWGQYISVDGLATLVDQEVVSAPEAIVLS LDETSTIAACGTGFDAYPQLIELLPTIELCEAAKFPEARYMLALAQDGVEKGQTTSVDDLAPVYLRDTVTWQKLPGRE
Sequences:
>Translated_238_residues MTKDSNGTTQLSVLALDTCTESCSAAVSHQGIVYSEQADAPREHSQRLLPMVKSVLAQAQLKLQDVDVIAYGRGPGSFTG IRICTSISQGLALGQELPVIGISTLAAMAQSAIDKGATQVLAAIDARMGEIYWGQYISVDGLATLVDQEVVSAPEAIVLS LDETSTIAACGTGFDAYPQLIELLPTIELCEAAKFPEARYMLALAQDGVEKGQTTSVDDLAPVYLRDTVTWQKLPGRE >Mature_237_residues TKDSNGTTQLSVLALDTCTESCSAAVSHQGIVYSEQADAPREHSQRLLPMVKSVLAQAQLKLQDVDVIAYGRGPGSFTGI RICTSISQGLALGQELPVIGISTLAAMAQSAIDKGATQVLAAIDARMGEIYWGQYISVDGLATLVDQEVVSAPEAIVLSL DETSTIAACGTGFDAYPQLIELLPTIELCEAAKFPEARYMLALAQDGVEKGQTTSVDDLAPVYLRDTVTWQKLPGRE
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=231, Percent_Identity=45.8874458874459, Blast_Score=197, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25264; Mature: 25133
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDSNGTTQLSVLALDTCTESCSAAVSHQGIVYSEQADAPREHSQRLLPMVKSVLAQAQ CCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH LKLQDVDVIAYGRGPGSFTGIRICTSISQGLALGQELPVIGISTLAAMAQSAIDKGATQV HHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAAIDARMGEIYWGQYISVDGLATLVDQEVVSAPEAIVLSLDETSTIAACGTGFDAYPQL HHHHHHHHCHHHCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHH IELLPTIELCEAAKFPEARYMLALAQDGVEKGQTTSVDDLAPVYLRDTVTWQKLPGRE HHHHCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEHCCCCCCCCCCCCC >Mature Secondary Structure TKDSNGTTQLSVLALDTCTESCSAAVSHQGIVYSEQADAPREHSQRLLPMVKSVLAQAQ CCCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH LKLQDVDVIAYGRGPGSFTGIRICTSISQGLALGQELPVIGISTLAAMAQSAIDKGATQV HHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAAIDARMGEIYWGQYISVDGLATLVDQEVVSAPEAIVLSLDETSTIAACGTGFDAYPQL HHHHHHHHCHHHCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHH IELLPTIELCEAAKFPEARYMLALAQDGVEKGQTTSVDDLAPVYLRDTVTWQKLPGRE HHHHCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]