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The map label for this gene is ydiS [C]

Identifier: 157961993

GI number: 157961993

Start: 2628853

End: 2630499

Strand: Direct

Name: ydiS [C]

Synonym: Spea_2172

Alternate gene names: 157961993

Gene position: 2628853-2630499 (Clockwise)

Preceding gene: 157961992

Following gene: 157961994

Centisome position: 50.8

GC content: 45.54

Gene sequence:

>1647_bases
ATGCGCGAAGTCATGGATTTTGATGTTGTGATTGTAGGAGCTGGGCCTTCAGGGCTATCCGCCGCTTGCAGGCTCATGCA
GCTGAGTAAACAGGAAAACCAACAAATTTCTGTTTGTGTTGTGGAGAAAGGTTCAGAGGTTGGGGCACATATCCTATCTG
GCGCCATTATCGAACCTCGAGCAATCGATGAGTTGTTTCCCGATTGGCGGACTCTAGGGGCACCATTAACAACCAGCGTG
ACAGAAGATAGATTACTTTTTTTGTCTGATAATAAAAAATCAATCACCTTGCCCCAAGTCGCTGTTCCAAAGCCGTTACA
TAATCAGGGAAACTATATTGCAAGTTTAGGTAATGTTTGCCGTTGGTTGGCTGAACAAGCTGAAGCGTTAGGAGTCGAGA
TATTTCCTGGATTCGCTGCGGCAGAAGTCCTATACCATGAGGATGGCTCAGTAAAAGGCATTGCAACCGGAGACATGGGG
GTCAGTAAAGATGGTCAACCGAACTCTCAATACATGCAAGGCATGGAGCTGCATGCAAAATTTACCTTATTCGGTGAAGG
GTGCCGTGGTCATTTAGGAAAAGAACTGATCCACAAGTTTGGCTTAGCCGATGAAAGTGATGCACAGCATTATGGGCTGG
GAATGAAAGAGATCTGGGACATTAATCCTGAGCTGCATCGTCCTGGACTGGTTGTGCATGGTTTTGGCTGGCCACTTGAT
AAAAATGCTGGCGGTGGTTTTTTCCTATACCACACCGATAATCATCAGCTAGTTGTAGGCTTAATTGTCGATCTCAATTA
CAGCAATACTCATTTAAGTCCTTTTGATGAATTTCAGCGCTTAAAGCATCACCCACAATTGGCACAATATCTAAAAGGTG
GGTCACGGGTGTCGTATGGAGCAAGGGCTATAGCTAAAGGGGGACTCAATGCGTTACCTGTAATGAGTTTTGCTGGAGGC
ATGCTGCTAGGTTGTAATGCTGGCACATTAAATGTGGCAAAAATTAAAGGTACCCATACCGCAATGAAGTCGGGGATGTT
ATGTGCTGAAACCGTATTTGACCTGCTCAATAACGACGTAACATCAGGCTCCACTGACGCAGTGTTCGAAGCTAAATTTA
AACAGTCTTGGCTTTATGAGGAGCTACATAGCAGCCGAAATTTTGGGCCCGCATTACACAAATACGGTACGCTCGCTGGC
GGTGGCTTTAACTATATTGATCAGAATTGGTTTGGCGGAAAGTTACCCTTGTCGCTACGAGATAATATTGAAGACCATGC
TTGCCTCCTCCCCAGCAGTGAGTCAAAACCCATTACTTACCCCAAACCTGATGGAATCTTAAGTTTTGATAAGTTGACCT
CGGTATTTCTGTCCAATACCAATCACGAAGAAGATCAGCCTTGCCATTTATCACTACTCGATCATTCCGTGCCTTCTAAA
CACAACATCCCAATTTTTGATGAACCAGCAGCACGCTATTGTCCTGCTGGGGTATACGAGGTAGTTGACAACGGCGGAGG
CAATGCACTGCAAATCAATGCGCAGAATTGTTTGCATTGTAAAACCTGCGACATAAAAGATCCGTCACAAAATATCAGAT
GGACAGTGCCAGAAGGCGGTGGCGGGCCGAGCTATCCCAACATGTAA

Upstream 100 bases:

>100_bases
TTTGAAAAACGCGATGCAACCTTTACTGGTAAGTAGCTGATATTAACCCGAATTAAAGCAATAGATCAGATTATTAAGAA
CGTTATTAATGGGAGACGTC

Downstream 100 bases:

>100_bases
AGCATATACGTTGTGATAAACCTCAGTGCCTAGTCTACAAGCAGGGGGGAGCGGTCTGTTCCCATATAGGCAATAGATTG
CCTTCATAATAATCAATTTG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MREVMDFDVVIVGAGPSGLSAACRLMQLSKQENQQISVCVVEKGSEVGAHILSGAIIEPRAIDELFPDWRTLGAPLTTSV
TEDRLLFLSDNKKSITLPQVAVPKPLHNQGNYIASLGNVCRWLAEQAEALGVEIFPGFAAAEVLYHEDGSVKGIATGDMG
VSKDGQPNSQYMQGMELHAKFTLFGEGCRGHLGKELIHKFGLADESDAQHYGLGMKEIWDINPELHRPGLVVHGFGWPLD
KNAGGGFFLYHTDNHQLVVGLIVDLNYSNTHLSPFDEFQRLKHHPQLAQYLKGGSRVSYGARAIAKGGLNALPVMSFAGG
MLLGCNAGTLNVAKIKGTHTAMKSGMLCAETVFDLLNNDVTSGSTDAVFEAKFKQSWLYEELHSSRNFGPALHKYGTLAG
GGFNYIDQNWFGGKLPLSLRDNIEDHACLLPSSESKPITYPKPDGILSFDKLTSVFLSNTNHEEDQPCHLSLLDHSVPSK
HNIPIFDEPAARYCPAGVYEVVDNGGGNALQINAQNCLHCKTCDIKDPSQNIRWTVPEGGGGPSYPNM

Sequences:

>Translated_548_residues
MREVMDFDVVIVGAGPSGLSAACRLMQLSKQENQQISVCVVEKGSEVGAHILSGAIIEPRAIDELFPDWRTLGAPLTTSV
TEDRLLFLSDNKKSITLPQVAVPKPLHNQGNYIASLGNVCRWLAEQAEALGVEIFPGFAAAEVLYHEDGSVKGIATGDMG
VSKDGQPNSQYMQGMELHAKFTLFGEGCRGHLGKELIHKFGLADESDAQHYGLGMKEIWDINPELHRPGLVVHGFGWPLD
KNAGGGFFLYHTDNHQLVVGLIVDLNYSNTHLSPFDEFQRLKHHPQLAQYLKGGSRVSYGARAIAKGGLNALPVMSFAGG
MLLGCNAGTLNVAKIKGTHTAMKSGMLCAETVFDLLNNDVTSGSTDAVFEAKFKQSWLYEELHSSRNFGPALHKYGTLAG
GGFNYIDQNWFGGKLPLSLRDNIEDHACLLPSSESKPITYPKPDGILSFDKLTSVFLSNTNHEEDQPCHLSLLDHSVPSK
HNIPIFDEPAARYCPAGVYEVVDNGGGNALQINAQNCLHCKTCDIKDPSQNIRWTVPEGGGGPSYPNM
>Mature_548_residues
MREVMDFDVVIVGAGPSGLSAACRLMQLSKQENQQISVCVVEKGSEVGAHILSGAIIEPRAIDELFPDWRTLGAPLTTSV
TEDRLLFLSDNKKSITLPQVAVPKPLHNQGNYIASLGNVCRWLAEQAEALGVEIFPGFAAAEVLYHEDGSVKGIATGDMG
VSKDGQPNSQYMQGMELHAKFTLFGEGCRGHLGKELIHKFGLADESDAQHYGLGMKEIWDINPELHRPGLVVHGFGWPLD
KNAGGGFFLYHTDNHQLVVGLIVDLNYSNTHLSPFDEFQRLKHHPQLAQYLKGGSRVSYGARAIAKGGLNALPVMSFAGG
MLLGCNAGTLNVAKIKGTHTAMKSGMLCAETVFDLLNNDVTSGSTDAVFEAKFKQSWLYEELHSSRNFGPALHKYGTLAG
GGFNYIDQNWFGGKLPLSLRDNIEDHACLLPSSESKPITYPKPDGILSFDKLTSVFLSNTNHEEDQPCHLSLLDHSVPSK
HNIPIFDEPAARYCPAGVYEVVDNGGGNALQINAQNCLHCKTCDIKDPSQNIRWTVPEGGGGPSYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=561, Percent_Identity=52.2281639928699, Blast_Score=586, Evalue=1e-167,
Organism=Escherichia coli, GI1787991, Length=401, Percent_Identity=26.1845386533666, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1786227, Length=365, Percent_Identity=26.027397260274, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI87082155, Length=331, Percent_Identity=26.2839879154079, Blast_Score=82, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI25144720, Length=561, Percent_Identity=49.9108734402852, Blast_Score=557, Evalue=1e-159,
Organism=Saccharomyces cerevisiae, GI6324932, Length=569, Percent_Identity=43.4094903339192, Blast_Score=464, Evalue=1e-131,
Organism=Drosophila melanogaster, GI24652256, Length=558, Percent_Identity=53.763440860215, Blast_Score=607, Evalue=1e-174,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 59510; Mature: 59510

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREVMDFDVVIVGAGPSGLSAACRLMQLSKQENQQISVCVVEKGSEVGAHILSGAIIEPR
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCCCCCH
AIDELFPDWRTLGAPLTTSVTEDRLLFLSDNKKSITLPQVAVPKPLHNQGNYIASLGNVC
HHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
RWLAEQAEALGVEIFPGFAAAEVLYHEDGSVKGIATGDMGVSKDGQPNSQYMQGMELHAK
HHHHHHHHHCCEEEECCHHEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHCCEEEEEE
FTLFGEGCRGHLGKELIHKFGLADESDAQHYGLGMKEIWDINPELHRPGLVVHGFGWPLD
EEEEECCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCC
KNAGGGFFLYHTDNHQLVVGLIVDLNYSNTHLSPFDEFQRLKHHPQLAQYLKGGSRVSYG
CCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEECCC
ARAIAKGGLNALPVMSFAGGMLLGCNAGTLNVAKIKGTHTAMKSGMLCAETVFDLLNNDV
HHHHHHCCCCCCHHHHHCCCEEEECCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHCCCC
TSGSTDAVFEAKFKQSWLYEELHSSRNFGPALHKYGTLAGGGFNYIDQNWFGGKLPLSLR
CCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
DNIEDHACLLPSSESKPITYPKPDGILSFDKLTSVFLSNTNHEEDQPCHLSLLDHSVPSK
CCCCCCEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
HNIPIFDEPAARYCPAGVYEVVDNGGGNALQINAQNCLHCKTCDIKDPSQNIRWTVPEGG
CCCCCCCCCHHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCC
GGPSYPNM
CCCCCCCC
>Mature Secondary Structure
MREVMDFDVVIVGAGPSGLSAACRLMQLSKQENQQISVCVVEKGSEVGAHILSGAIIEPR
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCCCCCH
AIDELFPDWRTLGAPLTTSVTEDRLLFLSDNKKSITLPQVAVPKPLHNQGNYIASLGNVC
HHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
RWLAEQAEALGVEIFPGFAAAEVLYHEDGSVKGIATGDMGVSKDGQPNSQYMQGMELHAK
HHHHHHHHHCCEEEECCHHEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHCCEEEEEE
FTLFGEGCRGHLGKELIHKFGLADESDAQHYGLGMKEIWDINPELHRPGLVVHGFGWPLD
EEEEECCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCC
KNAGGGFFLYHTDNHQLVVGLIVDLNYSNTHLSPFDEFQRLKHHPQLAQYLKGGSRVSYG
CCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEECCC
ARAIAKGGLNALPVMSFAGGMLLGCNAGTLNVAKIKGTHTAMKSGMLCAETVFDLLNNDV
HHHHHHCCCCCCHHHHHCCCEEEECCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHCCCC
TSGSTDAVFEAKFKQSWLYEELHSSRNFGPALHKYGTLAGGGFNYIDQNWFGGKLPLSLR
CCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
DNIEDHACLLPSSESKPITYPKPDGILSFDKLTSVFLSNTNHEEDQPCHLSLLDHSVPSK
CCCCCCEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
HNIPIFDEPAARYCPAGVYEVVDNGGGNALQINAQNCLHCKTCDIKDPSQNIRWTVPEGG
CCCCCCCCCHHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCC
GGPSYPNM
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]