| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ucpA [C]
Identifier: 157961994
GI number: 157961994
Start: 2630610
End: 2631374
Strand: Direct
Name: ucpA [C]
Synonym: Spea_2173
Alternate gene names: 157961994
Gene position: 2630610-2631374 (Clockwise)
Preceding gene: 157961993
Following gene: 157961995
Centisome position: 50.84
GC content: 43.14
Gene sequence:
>765_bases ATGAGCGGACGTTTAATTGGAAAGGTTGCCTTAATTACCGGGGCAGCCCGAGGTGTTGGTTTAGCAACTGCGAGATTAAT GGCAAGGGAAGGAGCCCAAGTTGTTCTCACCGATATAAATGCTGAACAAGGGAAAGAGATAGCAAATAGTATTGGTAATA ATAGCTTGTTCATAGAACATGATGTCACTAAAGAGGCTGATTGGTCTGCTGTTATCAATCATATTGAAGCTAAATTTGGC CAATTAAATATTCTGCTCAATAACGCCGCAATCTTGCAACTTGGTGACATCAAAGAAGAAACGTTGGCAGGATGGCAGAG AGTGCACATGGTTAATTCAGACAGTGTTTTTCTTAGGATCCACTATGCTTTGCCGCTAATGGAAAAAAGTGGCGGTGGTT CAATTATCAATATGTCCTCTTCATCAGCCGTTTTCGGTATGCCACATTTTGCAGCCTATGGTGCGAGTAAAGCCGCTATT CGTGGACTGTCTCAAAGTGTTGCGGTTTATTGTTCGCAGACCAAAAATAACGTTAGGTGCAACACCTTGCATCCGGATTC AATTATGACACCTATGGTTATGGAGATAAGTGCACAAGCAGGTGATCGCAGCTTAGCAGATCCTGATCGTGCTAAGGCTT ATGTATGCCGTCCTGAAGACGTCGCTAATAGTGTTTTATTTCTAGCGTCCGATGAATCAAAACATATTAATGGTGCCGCT ATTGCGCTAGACGGTGGGGCGACAGTAACTCCTCCTTATATTTAA
Upstream 100 bases:
>100_bases TTGTGATAAACCTCAGTGCCTAGTCTACAAGCAGGGGGGAGCGGTCTGTTCCCATATAGGCAATAGATTGCCTTCATAAT AATCAATTTGGAGAGATGCT
Downstream 100 bases:
>100_bases TTTTGCTCGCTTTGGTTCATTAATAAATGGAGATTATTATGATATCTGAACAATTTGGTCTAGGAGTCGTTTCTAGCTAT ATAGAGTTTTTAAATACCGG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSGRLIGKVALITGAARGVGLATARLMAREGAQVVLTDINAEQGKEIANSIGNNSLFIEHDVTKEADWSAVINHIEAKFG QLNILLNNAAILQLGDIKEETLAGWQRVHMVNSDSVFLRIHYALPLMEKSGGGSIINMSSSSAVFGMPHFAAYGASKAAI RGLSQSVAVYCSQTKNNVRCNTLHPDSIMTPMVMEISAQAGDRSLADPDRAKAYVCRPEDVANSVLFLASDESKHINGAA IALDGGATVTPPYI
Sequences:
>Translated_254_residues MSGRLIGKVALITGAARGVGLATARLMAREGAQVVLTDINAEQGKEIANSIGNNSLFIEHDVTKEADWSAVINHIEAKFG QLNILLNNAAILQLGDIKEETLAGWQRVHMVNSDSVFLRIHYALPLMEKSGGGSIINMSSSSAVFGMPHFAAYGASKAAI RGLSQSVAVYCSQTKNNVRCNTLHPDSIMTPMVMEISAQAGDRSLADPDRAKAYVCRPEDVANSVLFLASDESKHINGAA IALDGGATVTPPYI >Mature_253_residues SGRLIGKVALITGAARGVGLATARLMAREGAQVVLTDINAEQGKEIANSIGNNSLFIEHDVTKEADWSAVINHIEAKFGQ LNILLNNAAILQLGDIKEETLAGWQRVHMVNSDSVFLRIHYALPLMEKSGGGSIINMSSSSAVFGMPHFAAYGASKAAIR GLSQSVAVYCSQTKNNVRCNTLHPDSIMTPMVMEISAQAGDRSLADPDRAKAYVCRPEDVANSVLFLASDESKHINGAAI ALDGGATVTPPYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=34.9397590361446, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=29.9595141700405, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI31542939, Length=251, Percent_Identity=29.4820717131474, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=29.3436293436293, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI4758504, Length=257, Percent_Identity=32.295719844358, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=28.9256198347107, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=27.2, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=31.7829457364341, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=33.5294117647059, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI4504505, Length=256, Percent_Identity=29.6875, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=27.4900398406374, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=26.5384615384615, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=25.1937984496124, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI109715829, Length=258, Percent_Identity=25.1937984496124, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=28.0632411067194, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI142976729, Length=234, Percent_Identity=24.7863247863248, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI40254986, Length=213, Percent_Identity=26.7605633802817, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI87082100, Length=264, Percent_Identity=34.8484848484849, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=32.8, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1790717, Length=257, Percent_Identity=28.0155642023346, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786812, Length=261, Percent_Identity=29.8850574712644, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=30.2040816326531, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=31.2, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=29.5719844357977, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=28.1124497991968, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=30.8, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788459, Length=256, Percent_Identity=25.78125, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787526, Length=240, Percent_Identity=29.5833333333333, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=26.5625, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787820, Length=230, Percent_Identity=23.9130434782609, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI2367365, Length=251, Percent_Identity=29.4820717131474, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786701, Length=225, Percent_Identity=24.8888888888889, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=33.4661354581673, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=32.1167883211679, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=28.3400809716599, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=31.3432835820896, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=31.6981132075472, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=30.3703703703704, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17560220, Length=270, Percent_Identity=34.0740740740741, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=29.368029739777, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=30.4832713754647, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=31.6981132075472, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=30.0751879699248, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=29.4776119402985, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17565030, Length=269, Percent_Identity=30.8550185873606, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17538182, Length=261, Percent_Identity=27.5862068965517, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI25147288, Length=263, Percent_Identity=30.7984790874525, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=28.2352941176471, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17560150, Length=267, Percent_Identity=29.5880149812734, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=28.8, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=27.34375, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=30.0380228136882, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=28.996282527881, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17567345, Length=193, Percent_Identity=30.0518134715026, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=27.7153558052434, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17563726, Length=269, Percent_Identity=28.2527881040892, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71982365, Length=248, Percent_Identity=25, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17568967, Length=208, Percent_Identity=31.25, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=28.0898876404494, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=28.4046692607004, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=27.6264591439689, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17564282, Length=202, Percent_Identity=28.2178217821782, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203115, Length=247, Percent_Identity=27.1255060728745, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203117, Length=250, Percent_Identity=26.8, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=29.6875, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17558628, Length=216, Percent_Identity=26.3888888888889, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71997402, Length=165, Percent_Identity=29.6969696969697, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=211, Percent_Identity=27.0142180094787, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322226, Length=204, Percent_Identity=22.5490196078431, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=247, Percent_Identity=28.7449392712551, Blast_Score=62, Evalue=7e-11, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=31.0483870967742, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=33.4630350194552, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=30.9803921568627, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=30.9803921568627, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI17737361, Length=258, Percent_Identity=31.0077519379845, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=31.2, Blast_Score=97, Evalue=7e-21, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=28.968253968254, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24643142, Length=260, Percent_Identity=29.6153846153846, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI281364892, Length=185, Percent_Identity=30.8108108108108, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=31.413612565445, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24640492, Length=189, Percent_Identity=29.1005291005291, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI21357673, Length=252, Percent_Identity=27.3809523809524, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24665243, Length=205, Percent_Identity=28.780487804878, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI221331218, Length=205, Percent_Identity=28.780487804878, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358495, Length=230, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI221331216, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24665247, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21356301, Length=176, Percent_Identity=26.1363636363636, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24584748, Length=198, Percent_Identity=29.7979797979798, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI161076933, Length=198, Percent_Identity=29.7979797979798, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.51 [H]
Molecular weight: Translated: 26949; Mature: 26818
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLIGKVALITGAARGVGLATARLMAREGAQVVLTDINAEQGKEIANSIGNNSLFIEH CCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEE DVTKEADWSAVINHIEAKFGQLNILLNNAAILQLGDIKEETLAGWQRVHMVNSDSVFLRI CCCCCCCHHHHHHHHHHCCCEEEEEEECEEEEEECCCCHHHHHCEEEEEEECCCCEEEEE HYALPLMEKSGGGSIINMSSSSAVFGMPHFAAYGASKAAIRGLSQSVAVYCSQTKNNVRC EEEEEEEECCCCCCEEEECCCCEEECCCHHHHHCCCHHHHHHCCCCEEEEEECCCCCEEE NTLHPDSIMTPMVMEISAQAGDRSLADPDRAKAYVCRPEDVANSVLFLASDESKHINGAA EEECCCHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHCCEEEEEECCCCCCCCCEE IALDGGATVTPPYI EEECCCCCCCCCCC >Mature Secondary Structure SGRLIGKVALITGAARGVGLATARLMAREGAQVVLTDINAEQGKEIANSIGNNSLFIEH CCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEE DVTKEADWSAVINHIEAKFGQLNILLNNAAILQLGDIKEETLAGWQRVHMVNSDSVFLRI CCCCCCCHHHHHHHHHHCCCEEEEEEECEEEEEECCCCHHHHHCEEEEEEECCCCEEEEE HYALPLMEKSGGGSIINMSSSSAVFGMPHFAAYGASKAAIRGLSQSVAVYCSQTKNNVRC EEEEEEEECCCCCCEEEECCCCEEECCCHHHHHCCCHHHHHHCCCCEEEEEECCCCCEEE NTLHPDSIMTPMVMEISAQAGDRSLADPDRAKAYVCRPEDVANSVLFLASDESKHINGAA EEECCCHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHCCEEEEEECCCCCCCCCEE IALDGGATVTPPYI EEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8382516; 2026158; 8617258 [H]