| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is paaF [C]
Identifier: 157961977
GI number: 157961977
Start: 2610086
End: 2611042
Strand: Direct
Name: paaF [C]
Synonym: Spea_2156
Alternate gene names: 157961977
Gene position: 2610086-2611042 (Clockwise)
Preceding gene: 157961976
Following gene: 157961978
Centisome position: 50.44
GC content: 47.13
Gene sequence:
>957_bases ATGTCTAACAATACAGCTCACAGTGAAGCGGCCCCGCAAACTACGGATAACCAACTAGCCGCGCTTGATGTAAGTCAGCG CGAAGATATTGATGGCGTCGTGTTTTATGAGGTGCGGGAACAAGTTGCAATTGTAACCATGAATCGCCCCGAATATAACA ATGCACAAAATTCGAAAATGACCTACGCGCTCGACGCCGCTTTTAAACGAGCGTGCGACGACGACAAGGTAAAAGTGATC ATACTCGCCGGTGAAGGTAAGCACTTTTCAGCCGGACATGACATCGGCACCCCCGGACGCGACGTTGACCAAGAGTTTGA TCGTGCCAGTCTTTGGTACGATCACAGCAATAAAAGCGGCGGTGAGTTTTTATATGCGAGAGAGCAAGAGGTTTACTTAG GTATGTGTCGTCGCTGGCGTGATATGCCGAAGCCGACCATTGCTATGGTACAAGGCGCCTGTATCGCTGGCGGGCTAATG CTAGCCTGGGTATGTGACCTAATTATCTGTTCTGATGATGCCTATTACTGCGACCCAGTTGTTCGAATGGGGATCCCAGG CGTTGAATATTTTGCGCACGTGCATGAGCTTAACTCTCGCATTGCAAAAGAGTTTTTATTCTTAGGCGACAAAATGAATG CTCAGCGTGCTTATGAGTTAGGCATGGTGAACCGAATTTTTTCGAGGAAAGATCTCACTAGCGAGACGTTAACCATAGCT AATAAAATCGCCCAAATGCCACGACTTGGTTTGCAACTAACTAAGCAAGCGATTAATAACGCAGAAGATTTGATGGGCAA ACGTAGCACTATGGATATGGTTTTTGGCTTACATCATTTTGCTCATGTTCATAATGAGTCAATATCCGGAGACAAACTCG GTGGCTTTGATGCAAAAGCGATGGCAAAAGCCAACAAGGCTGCCAGCGGTGCAGAGAAGTGCAAGGAGACATCATGA
Upstream 100 bases:
>100_bases TTGCCGCGTTAGATCCGCATAACTTAAGAGCAAAACAACTTAAAGACAATCCTCCTGGTGATAGAACCACTAGCGCCAAA CTCGTAGAAGAGGTGGCCTA
Downstream 100 bases:
>100_bases GCCATGCCGTTGATGCTACAAATCCTGTTGATCCAGTGTATGAGCTTAAAACCGATTTAACTGAAATGCTGGGTTGCCGC TATCCCATTGTCCAAACCGC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSNNTAHSEAAPQTTDNQLAALDVSQREDIDGVVFYEVREQVAIVTMNRPEYNNAQNSKMTYALDAAFKRACDDDKVKVI ILAGEGKHFSAGHDIGTPGRDVDQEFDRASLWYDHSNKSGGEFLYAREQEVYLGMCRRWRDMPKPTIAMVQGACIAGGLM LAWVCDLIICSDDAYYCDPVVRMGIPGVEYFAHVHELNSRIAKEFLFLGDKMNAQRAYELGMVNRIFSRKDLTSETLTIA NKIAQMPRLGLQLTKQAINNAEDLMGKRSTMDMVFGLHHFAHVHNESISGDKLGGFDAKAMAKANKAASGAEKCKETS
Sequences:
>Translated_318_residues MSNNTAHSEAAPQTTDNQLAALDVSQREDIDGVVFYEVREQVAIVTMNRPEYNNAQNSKMTYALDAAFKRACDDDKVKVI ILAGEGKHFSAGHDIGTPGRDVDQEFDRASLWYDHSNKSGGEFLYAREQEVYLGMCRRWRDMPKPTIAMVQGACIAGGLM LAWVCDLIICSDDAYYCDPVVRMGIPGVEYFAHVHELNSRIAKEFLFLGDKMNAQRAYELGMVNRIFSRKDLTSETLTIA NKIAQMPRLGLQLTKQAINNAEDLMGKRSTMDMVFGLHHFAHVHNESISGDKLGGFDAKAMAKANKAASGAEKCKETS >Mature_317_residues SNNTAHSEAAPQTTDNQLAALDVSQREDIDGVVFYEVREQVAIVTMNRPEYNNAQNSKMTYALDAAFKRACDDDKVKVII LAGEGKHFSAGHDIGTPGRDVDQEFDRASLWYDHSNKSGGEFLYAREQEVYLGMCRRWRDMPKPTIAMVQGACIAGGLML AWVCDLIICSDDAYYCDPVVRMGIPGVEYFAHVHELNSRIAKEFLFLGDKMNAQRAYELGMVNRIFSRKDLTSETLTIAN KIAQMPRLGLQLTKQAINNAEDLMGKRSTMDMVFGLHHFAHVHNESISGDKLGGFDAKAMAKANKAASGAEKCKETS
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=215, Percent_Identity=28.8372093023256, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI194097323, Length=225, Percent_Identity=28, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI70995211, Length=201, Percent_Identity=29.3532338308458, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI45643119, Length=227, Percent_Identity=25.9911894273128, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI260275230, Length=227, Percent_Identity=25.9911894273128, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI260274832, Length=227, Percent_Identity=25.9911894273128, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1787659, Length=229, Percent_Identity=27.9475982532751, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788597, Length=237, Percent_Identity=28.6919831223629, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI221142681, Length=251, Percent_Identity=26.6932270916335, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1787660, Length=231, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082183, Length=243, Percent_Identity=25.5144032921811, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25145438, Length=224, Percent_Identity=29.4642857142857, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17554946, Length=233, Percent_Identity=28.755364806867, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17536985, Length=231, Percent_Identity=26.4069264069264, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17534483, Length=227, Percent_Identity=27.3127753303965, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17560910, Length=219, Percent_Identity=26.9406392694064, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI20129971, Length=247, Percent_Identity=27.5303643724696, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24653477, Length=247, Percent_Identity=27.5303643724696, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI19920382, Length=218, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650670, Length=263, Percent_Identity=26.9961977186312, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357171, Length=222, Percent_Identity=27.4774774774775, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24654903, Length=217, Percent_Identity=22.1198156682028, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 35331; Mature: 35200
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNTAHSEAAPQTTDNQLAALDVSQREDIDGVVFYEVREQVAIVTMNRPEYNNAQNSKM CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEE TYALDAAFKRACDDDKVKVIILAGEGKHFSAGHDIGTPGRDVDQEFDRASLWYDHSNKSG EEHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCC GEFLYAREQEVYLGMCRRWRDMPKPTIAMVQGACIAGGLMLAWVCDLIICSDDAYYCDPV CCEEEECCHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHEECCCCEECCHH VRMGIPGVEYFAHVHELNSRIAKEFLFLGDKMNAQRAYELGMVNRIFSRKDLTSETLTIA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH NKIAQMPRLGLQLTKQAINNAEDLMGKRSTMDMVFGLHHFAHVHNESISGDKLGGFDAKA HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH MAKANKAASGAEKCKETS HHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNNTAHSEAAPQTTDNQLAALDVSQREDIDGVVFYEVREQVAIVTMNRPEYNNAQNSKM CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEE TYALDAAFKRACDDDKVKVIILAGEGKHFSAGHDIGTPGRDVDQEFDRASLWYDHSNKSG EEHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCC GEFLYAREQEVYLGMCRRWRDMPKPTIAMVQGACIAGGLMLAWVCDLIICSDDAYYCDPV CCEEEECCHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHEECCCCEECCHH VRMGIPGVEYFAHVHELNSRIAKEFLFLGDKMNAQRAYELGMVNRIFSRKDLTSETLTIA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH NKIAQMPRLGLQLTKQAINNAEDLMGKRSTMDMVFGLHHFAHVHNESISGDKLGGFDAKA HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH MAKANKAASGAEKCKETS HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA