| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961978
Identifier: 157961978
GI number: 157961978
Start: 2611039
End: 2612193
Strand: Direct
Name: 157961978
Synonym: Spea_2157
Alternate gene names: NA
Gene position: 2611039-2612193 (Clockwise)
Preceding gene: 157961977
Following gene: 157961979
Centisome position: 50.46
GC content: 46.15
Gene sequence:
>1155_bases ATGAGCCATGCCGTTGATGCTACAAATCCTGTTGATCCAGTGTATGAGCTTAAAACCGATTTAACTGAAATGCTGGGTTG CCGCTATCCCATTGTCCAAACCGCAATGGGTTGGGTGTCAGACGCAAACTTGGTGATTGCAACCACAAAAGCGGGCGGAT TTGGATTCTTAGCCGGTGCGACAATAGAGGCTTCTGAGCTAGAAAATGAAATTCTCAAGGTTATTACTGCCACTGGGAAT AGTCATTTTGGTCTCAATTTTCATATGTTCCAAGAGAATGCCAAAGAGTGTGTTGATCTCGCGATCAAGTACTCCCTTAG AGCCGTTAGTTATGGCCGAGGCCCAGATAAACAAACCATCTCGCGGCTAAAAGCAGCAAAAGTGTTATGTATCCCTACCG TTGGCGCACTGAAACATGCGTTAAAAGCGCAAGCGCTAGGGGCTGACATCATCACGATTCAAGGTGGAGAAGGTGGTGGC CATACTGGCGGTGTGCCTTCAAGCATACTCTTACCCCAAGTACTCGATGCGGTATCGATTCCAGTAATTGCGGCAGGTGG ATTCTCAACCGGACGTGGTTTAGCTGCAGCTTTAGCTTCTGGAGCATGCGGTATAGCAATGGGGACTCGTTTTTTAATGA CCTCTGACTCACCCACACCGGCACATACGCTCAATAAGTATTTGGAAGTTAACGACACCCAAGCTATTAAAGTGACAACA GCTGTAGATGGTATGCGCCATAGAATGATTAATTCTCCATTTATTGCGCGCCTTGAAAAAGCCAGCCCATTTGGGCGTCT ACGGATCGCACTAGCAAGTGCATGGTACTGGAAAAATGAAACCGGAATGACATTTGCCCACATGGTCAAAGTGTTTATCG AATCGGTGAAAACTGAGCCTGGGGCCGTGTCTCAAGTTGTTATGTCCGCAAATCAGCCAGTGTTATTACAGCGTTCAATG GTCGATGGCCAACCCAATGAAGGCATTCTGCCAAGTGGTCAAGTTGCAGCCTCAATTAATGAACTTATCAGTGTCGATCA GCTAGTAACCGATATCGTAAAACAAGCACATCAATGCTTAAGCCAACTTCAGGCTCGAACATTAATTACCGAGACACCAA TCAATAAAAATCACTCTACAAAGGAGGCTAGCTAA
Upstream 100 bases:
>100_bases ATGAGTCAATATCCGGAGACAAACTCGGTGGCTTTGATGCAAAAGCGATGGCAAAAGCCAACAAGGCTGCCAGCGGTGCA GAGAAGTGCAAGGAGACATC
Downstream 100 bases:
>100_bases TTATGGCCAATGCATCGGTTAACCCTATTTCGCTGCCTAAATCAGCATTTATTACAGAGCTAAAAAATGGCGTCGCGGAG TTGGTGATCAACAAACCGCC
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSHAVDATNPVDPVYELKTDLTEMLGCRYPIVQTAMGWVSDANLVIATTKAGGFGFLAGATIEASELENEILKVITATGN SHFGLNFHMFQENAKECVDLAIKYSLRAVSYGRGPDKQTISRLKAAKVLCIPTVGALKHALKAQALGADIITIQGGEGGG HTGGVPSSILLPQVLDAVSIPVIAAGGFSTGRGLAAALASGACGIAMGTRFLMTSDSPTPAHTLNKYLEVNDTQAIKVTT AVDGMRHRMINSPFIARLEKASPFGRLRIALASAWYWKNETGMTFAHMVKVFIESVKTEPGAVSQVVMSANQPVLLQRSM VDGQPNEGILPSGQVAASINELISVDQLVTDIVKQAHQCLSQLQARTLITETPINKNHSTKEAS
Sequences:
>Translated_384_residues MSHAVDATNPVDPVYELKTDLTEMLGCRYPIVQTAMGWVSDANLVIATTKAGGFGFLAGATIEASELENEILKVITATGN SHFGLNFHMFQENAKECVDLAIKYSLRAVSYGRGPDKQTISRLKAAKVLCIPTVGALKHALKAQALGADIITIQGGEGGG HTGGVPSSILLPQVLDAVSIPVIAAGGFSTGRGLAAALASGACGIAMGTRFLMTSDSPTPAHTLNKYLEVNDTQAIKVTT AVDGMRHRMINSPFIARLEKASPFGRLRIALASAWYWKNETGMTFAHMVKVFIESVKTEPGAVSQVVMSANQPVLLQRSM VDGQPNEGILPSGQVAASINELISVDQLVTDIVKQAHQCLSQLQARTLITETPINKNHSTKEAS >Mature_383_residues SHAVDATNPVDPVYELKTDLTEMLGCRYPIVQTAMGWVSDANLVIATTKAGGFGFLAGATIEASELENEILKVITATGNS HFGLNFHMFQENAKECVDLAIKYSLRAVSYGRGPDKQTISRLKAAKVLCIPTVGALKHALKAQALGADIITIQGGEGGGH TGGVPSSILLPQVLDAVSIPVIAAGGFSTGRGLAAALASGACGIAMGTRFLMTSDSPTPAHTLNKYLEVNDTQAIKVTTA VDGMRHRMINSPFIARLEKASPFGRLRIALASAWYWKNETGMTFAHMVKVFIESVKTEPGAVSQVVMSANQPVLLQRSMV DGQPNEGILPSGQVAASINELISVDQLVTDIVKQAHQCLSQLQARTLITETPINKNHSTKEAS
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 40706; Mature: 40575
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAVDATNPVDPVYELKTDLTEMLGCRYPIVQTAMGWVSDANLVIATTKAGGFGFLAGA CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECC TIEASELENEILKVITATGNSHFGLNFHMFQENAKECVDLAIKYSLRAVSYGRGPDKQTI EEEHHHHHHHHHHHHEECCCCEECEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH SRLKAAKVLCIPTVGALKHALKAQALGADIITIQGGEGGGHTGGVPSSILLPQVLDAVSI HHHHHHEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC PVIAAGGFSTGRGLAAALASGACGIAMGTRFLMTSDSPTPAHTLNKYLEVNDTQAIKVTT CEEEECCCCCCHHHHHHHHCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEE AVDGMRHRMINSPFIARLEKASPFGRLRIALASAWYWKNETGMTFAHMVKVFIESVKTEP HHHHHHHHHCCCHHHHHHHCCCCCHHEEEEEHHHHEECCCCCCHHHHHHHHHHHHHCCCC GAVSQVVMSANQPVLLQRSMVDGQPNEGILPSGQVAASINELISVDQLVTDIVKQAHQCL CHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLQARTLITETPINKNHSTKEAS HHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SHAVDATNPVDPVYELKTDLTEMLGCRYPIVQTAMGWVSDANLVIATTKAGGFGFLAGA CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECC TIEASELENEILKVITATGNSHFGLNFHMFQENAKECVDLAIKYSLRAVSYGRGPDKQTI EEEHHHHHHHHHHHHEECCCCEECEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH SRLKAAKVLCIPTVGALKHALKAQALGADIITIQGGEGGGHTGGVPSSILLPQVLDAVSI HHHHHHEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC PVIAAGGFSTGRGLAAALASGACGIAMGTRFLMTSDSPTPAHTLNKYLEVNDTQAIKVTT CEEEECCCCCCHHHHHHHHCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEE AVDGMRHRMINSPFIARLEKASPFGRLRIALASAWYWKNETGMTFAHMVKVFIESVKTEP HHHHHHHHHCCCHHHHHHHCCCCCHHEEEEEHHHHEECCCCCCHHHHHHHHHHHHHCCCC GAVSQVVMSANQPVLLQRSMVDGQPNEGILPSGQVAASINELISVDQLVTDIVKQAHQCL CHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLQARTLITETPINKNHSTKEAS HHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA