| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961976
Identifier: 157961976
GI number: 157961976
Start: 2609256
End: 2610086
Strand: Direct
Name: 157961976
Synonym: Spea_2155
Alternate gene names: NA
Gene position: 2609256-2610086 (Clockwise)
Preceding gene: 157961975
Following gene: 157961977
Centisome position: 50.42
GC content: 45.73
Gene sequence:
>831_bases ATGACTATAGCGAAAGAGTACAGCTTAGCAGAGCTGATGATATGCGCCGCTGCAGAGGCATTTCGCCATGATGGTGAGGT ACTTGCAACCGGTATTGGGCTAATTCCTCGCCTTGGTGCTAGTTTAGCCATGAAAACTTTTAACAGCGATCTGATGATGA CAGACTCAGAAGCTTATTTGTTGTCAGAGCCAAATCCGGTAGGGCCAAGAGCTGATAATTACATTCAGCAAAATGAAACA TGGATGGGTTTTTCACGGATTTTTGATAATGTTTGGAGCCGTAAGCGCCATGCGATGGTAGGCCCGACTCAAATTGACCA ATTTGGTCAGGCAAACATTTCAGCATTAGGCAGTGACTATAGTAAGCCAAAGGTGCAAATGCTTGGCGTAAGGGGCTTTC CTGGCAACTCAATTAGCCACCCTAATTCGTTCTTTGTACCAAGCCACAATACTCGTGTTTTCGTAAAAGGTGAGTGCGAT ATGGTGGCATCGATTGGTTATAACCCTGAACGGTTGCCAAAAGGCTACCGACTCGATGATATCGATATACGCCTAGTGAT AACCGATCTATGCGTGATGGACTTTAACGGCCCGGATCACCAATTACGTTTAGTGAGTCTGCATCCCGGGGTCGCGCTTA ATACGGTTATTGAAAATACAGGGTTTGCAATAGACATTGCGCAAAATGTAAAGACAACACCGCCGCCAACCGTTGAGCAA CTCGCTATTATTGCCGCGTTAGATCCGCATAACTTAAGAGCAAAACAACTTAAAGACAATCCTCCTGGTGATAGAACCAC TAGCGCCAAACTCGTAGAAGAGGTGGCCTAA
Upstream 100 bases:
>100_bases AACAATTAGCCTTACCGGTTTACTAAACATATCAACGACAGCAGCGCCTTGAATACATTGCGAGGCGGTCAAATTTTGCA GCAAGGAAAAGGATAACACG
Downstream 100 bases:
>100_bases TGTCTAACAATACAGCTCACAGTGAAGCGGCCCCGCAAACTACGGATAACCAACTAGCCGCGCTTGATGTAAGTCAGCGC GAAGATATTGATGGCGTCGT
Product: coenzyme A transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTIAKEYSLAELMICAAAEAFRHDGEVLATGIGLIPRLGASLAMKTFNSDLMMTDSEAYLLSEPNPVGPRADNYIQQNET WMGFSRIFDNVWSRKRHAMVGPTQIDQFGQANISALGSDYSKPKVQMLGVRGFPGNSISHPNSFFVPSHNTRVFVKGECD MVASIGYNPERLPKGYRLDDIDIRLVITDLCVMDFNGPDHQLRLVSLHPGVALNTVIENTGFAIDIAQNVKTTPPPTVEQ LAIIAALDPHNLRAKQLKDNPPGDRTTSAKLVEEVA
Sequences:
>Translated_276_residues MTIAKEYSLAELMICAAAEAFRHDGEVLATGIGLIPRLGASLAMKTFNSDLMMTDSEAYLLSEPNPVGPRADNYIQQNET WMGFSRIFDNVWSRKRHAMVGPTQIDQFGQANISALGSDYSKPKVQMLGVRGFPGNSISHPNSFFVPSHNTRVFVKGECD MVASIGYNPERLPKGYRLDDIDIRLVITDLCVMDFNGPDHQLRLVSLHPGVALNTVIENTGFAIDIAQNVKTTPPPTVEQ LAIIAALDPHNLRAKQLKDNPPGDRTTSAKLVEEVA >Mature_275_residues TIAKEYSLAELMICAAAEAFRHDGEVLATGIGLIPRLGASLAMKTFNSDLMMTDSEAYLLSEPNPVGPRADNYIQQNETW MGFSRIFDNVWSRKRHAMVGPTQIDQFGQANISALGSDYSKPKVQMLGVRGFPGNSISHPNSFFVPSHNTRVFVKGECDM VASIGYNPERLPKGYRLDDIDIRLVITDLCVMDFNGPDHQLRLVSLHPGVALNTVIENTGFAIDIAQNVKTTPPPTVEQL AIIAALDPHNLRAKQLKDNPPGDRTTSAKLVEEVA
Specific function: Probable subunit of a CoA-transferase composed of Rv3551 and Rv3552 [H]
COG id: COG2057
COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30292; Mature: 30161
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAKEYSLAELMICAAAEAFRHDGEVLATGIGLIPRLGASLAMKTFNSDLMMTDSEAYL CCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCHHHHHHHCCCCEEEECCCEEE LSEPNPVGPRADNYIQQNETWMGFSRIFDNVWSRKRHAMVGPTQIDQFGQANISALGSDY EECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHCCCC SKPKVQMLGVRGFPGNSISHPNSFFVPSHNTRVFVKGECDMVASIGYNPERLPKGYRLDD CCCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEECCCCHHHCCCCCCCCC IDIRLVITDLCVMDFNGPDHQLRLVSLHPGVALNTVIENTGFAIDIAQNVKTTPPPTVEQ CEEEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCHHH LAIIAALDPHNLRAKQLKDNPPGDRTTSAKLVEEVA EEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TIAKEYSLAELMICAAAEAFRHDGEVLATGIGLIPRLGASLAMKTFNSDLMMTDSEAYL CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCHHHHHHHCCCCEEEECCCEEE LSEPNPVGPRADNYIQQNETWMGFSRIFDNVWSRKRHAMVGPTQIDQFGQANISALGSDY EECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHCCCC SKPKVQMLGVRGFPGNSISHPNSFFVPSHNTRVFVKGECDMVASIGYNPERLPKGYRLDD CCCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEECCCCHHHCCCCCCCCC IDIRLVITDLCVMDFNGPDHQLRLVSLHPGVALNTVIENTGFAIDIAQNVKTTPPPTVEQ CEEEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCHHH LAIIAALDPHNLRAKQLKDNPPGDRTTSAKLVEEVA EEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]